EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001006651 (Gene tree)
Gene ID: -
Gene Symbol: Polr1a
Alias: 194kDa|2900087K15Rik|3010014K16Rik|RPA194|Rpo1-4|mRPA1
Full Name: polymerase (RNA) I polypeptide A
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 63536 bases
Position: chrscaffold_42:10410095-10473630
Accession: 1096397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005127	RNA_pol_Rpb1_5	PF04998.17	1.8e-103	1	1
ENSCGRP00001005127	RNA_pol_Rpb1_4	PF05000.17	5.7e-26	1	1
ENSCGRP00001005127	RNA_pol_Rpb1_2	PF00623.20	2.4e-70	1	1
ENSCGRP00001005127	RNA_pol_Rpb1_3	PF04983.18	1.8e-15	1	1
ENSCGRP00001005127	RNA_pol_Rpb1_1	PF04997.12	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007829	-	4965	-	ENSCGRP00001005127	1654 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001006651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001006651	Polr1a	57	34.286	ENSCGRG00001003538	Polr2a	52	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006651	Polr1a	100	89.825	ENSG00000068654	POLR1A	96	89.825	Homo_sapiens
ENSCGRG00001006651	Polr1a	68	61.274	ENSAPOG00000017945	polr1a	94	67.540	Acanthochromis_polyacanthus
ENSCGRG00001006651	Polr1a	100	83.130	ENSAMEG00000005807	POLR1A	100	82.957	Ailuropoda_melanoleuca
ENSCGRG00001006651	Polr1a	96	75.706	ENSACIG00000022147	polr1a	96	63.214	Amphilophus_citrinellus
ENSCGRG00001006651	Polr1a	100	61.654	ENSAOCG00000017336	polr1a	100	61.800	Amphiprion_ocellaris
ENSCGRG00001006651	Polr1a	94	72.222	ENSAPEG00000016105	polr1a	94	72.222	Amphiprion_percula
ENSCGRG00001006651	Polr1a	100	66.825	ENSATEG00000016773	polr1a	96	66.825	Anabas_testudineus
ENSCGRG00001006651	Polr1a	85	77.573	ENSAPLG00000013871	POLR1A	96	77.573	Anas_platyrhynchos
ENSCGRG00001006651	Polr1a	99	69.841	ENSACAG00000012141	POLR1A	96	69.841	Anolis_carolinensis
ENSCGRG00001006651	Polr1a	100	82.503	ENSANAG00000033927	POLR1A	96	88.394	Aotus_nancymaae
ENSCGRG00001006651	Polr1a	100	57.825	ENSACLG00000020541	polr1a	96	62.233	Astatotilapia_calliptera
ENSCGRG00001006651	Polr1a	100	88.871	ENSBTAG00000006481	POLR1A	96	88.871	Bos_taurus
ENSCGRG00001006651	Polr1a	99	37.535	WBGene00012999	rpoa-1	98	37.268	Caenorhabditis_elegans
ENSCGRG00001006651	Polr1a	100	81.876	ENSCJAG00000019547	POLR1A	100	81.992	Callithrix_jacchus
ENSCGRG00001006651	Polr1a	100	83.295	ENSCAFG00000007613	POLR1A	100	83.295	Canis_familiaris
ENSCGRG00001006651	Polr1a	100	83.585	ENSCAFG00020014752	POLR1A	100	83.585	Canis_lupus_dingo
ENSCGRG00001006651	Polr1a	100	82.480	ENSCHIG00000018204	POLR1A	100	82.024	Capra_hircus
ENSCGRG00001006651	Polr1a	100	88.553	ENSTSYG00000002761	POLR1A	96	88.553	Carlito_syrichta
ENSCGRG00001006651	Polr1a	97	85.763	ENSCAPG00000010132	POLR1A	96	85.763	Cavia_aperea
ENSCGRG00001006651	Polr1a	100	89.825	ENSCPOG00000012350	POLR1A	96	89.825	Cavia_porcellus
ENSCGRG00001006651	Polr1a	100	82.397	ENSCCAG00000019839	POLR1A	100	82.513	Cebus_capucinus
ENSCGRG00001006651	Polr1a	100	83.382	ENSCATG00000029786	POLR1A	100	82.727	Cercocebus_atys
ENSCGRG00001006651	Polr1a	100	84.544	ENSCLAG00000005187	POLR1A	96	90.620	Chinchilla_lanigera
ENSCGRG00001006651	Polr1a	100	89.507	ENSCSAG00000016251	POLR1A	96	89.507	Chlorocebus_sabaeus
ENSCGRG00001006651	Polr1a	99	69.512	ENSCPBG00000001115	POLR1A	99	69.616	Chrysemys_picta_bellii
ENSCGRG00001006651	Polr1a	97	46.296	ENSCSAVG00000007184	-	97	50.000	Ciona_savignyi
ENSCGRG00001006651	Polr1a	100	80.498	ENSCANG00000031785	POLR1A	100	80.023	Colobus_angolensis_palliatus
ENSCGRG00001006651	Polr1a	62	100.000	ENSCGRG00000010834	Polr1a	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001006651	Polr1a	100	57.670	ENSCSEG00000020190	polr1a	100	57.402	Cynoglossus_semilaevis
ENSCGRG00001006651	Polr1a	100	60.162	ENSCVAG00000020941	polr1a	100	59.701	Cyprinodon_variegatus
ENSCGRG00001006651	Polr1a	100	68.191	ENSDARG00000098375	polr1a	96	67.442	Danio_rerio
ENSCGRG00001006651	Polr1a	100	85.692	ENSDNOG00000010829	POLR1A	96	85.692	Dasypus_novemcinctus
ENSCGRG00001006651	Polr1a	100	85.061	ENSDORG00000008298	Polr1a	100	84.598	Dipodomys_ordii
ENSCGRG00001006651	Polr1a	80	41.423	FBgn0019938	RpI1	99	41.299	Drosophila_melanogaster
ENSCGRG00001006651	Polr1a	71	96.875	ENSETEG00000000412	-	68	96.875	Echinops_telfairi
ENSCGRG00001006651	Polr1a	85	67.442	ENSEBUG00000005667	-	93	67.442	Eptatretus_burgeri
ENSCGRG00001006651	Polr1a	100	83.449	ENSEASG00005001625	POLR1A	100	83.391	Equus_asinus_asinus
ENSCGRG00001006651	Polr1a	100	83.333	ENSECAG00000036306	-	99	86.226	Equus_caballus
ENSCGRG00001006651	Polr1a	100	83.333	ENSECAG00000030510	-	99	86.226	Equus_caballus
ENSCGRG00001006651	Polr1a	100	83.333	ENSECAG00000010092	POLR1A	99	86.226	Equus_caballus
ENSCGRG00001006651	Polr1a	85	96.809	ENSEEUG00000000676	POLR1A	85	96.667	Erinaceus_europaeus
ENSCGRG00001006651	Polr1a	100	67.886	ENSELUG00000012769	polr1a	95	67.886	Esox_lucius
ENSCGRG00001006651	Polr1a	100	83.072	ENSFCAG00000008966	POLR1A	100	82.783	Felis_catus
ENSCGRG00001006651	Polr1a	99	71.895	ENSFALG00000010082	POLR1A	96	71.895	Ficedula_albicollis
ENSCGRG00001006651	Polr1a	100	84.410	ENSFDAG00000013726	POLR1A	100	84.410	Fukomys_damarensis
ENSCGRG00001006651	Polr1a	100	57.433	ENSFHEG00000005996	polr1a	100	57.251	Fundulus_heteroclitus
ENSCGRG00001006651	Polr1a	100	61.965	ENSGMOG00000002230	polr1a	96	61.868	Gadus_morhua
ENSCGRG00001006651	Polr1a	90	62.956	ENSGALG00000038160	-	99	62.460	Gallus_gallus
ENSCGRG00001006651	Polr1a	100	59.117	ENSGAFG00000015266	polr1a	100	59.397	Gambusia_affinis
ENSCGRG00001006651	Polr1a	100	60.035	ENSGACG00000018791	polr1a	100	60.035	Gasterosteus_aculeatus
ENSCGRG00001006651	Polr1a	89	70.059	ENSGAGG00000004984	-	99	70.059	Gopherus_agassizii
ENSCGRG00001006651	Polr1a	100	89.825	ENSGGOG00000001788	POLR1A	96	89.825	Gorilla_gorilla
ENSCGRG00001006651	Polr1a	90	65.789	ENSHBUG00000020021	polr1a	92	68.511	Haplochromis_burtoni
ENSCGRG00001006651	Polr1a	100	85.215	ENSHGLG00000006334	POLR1A	100	85.215	Heterocephalus_glaber_female
ENSCGRG00001006651	Polr1a	100	84.968	ENSHGLG00100006614	POLR1A	100	84.968	Heterocephalus_glaber_male
ENSCGRG00001006651	Polr1a	100	63.934	ENSHCOG00000003345	polr1a	96	63.671	Hippocampus_comes
ENSCGRG00001006651	Polr1a	100	66.149	ENSIPUG00000013174	polr1a	96	65.792	Ictalurus_punctatus
ENSCGRG00001006651	Polr1a	100	82.829	ENSSTOG00000012580	POLR1A	100	82.887	Ictidomys_tridecemlineatus
ENSCGRG00001006651	Polr1a	100	85.640	ENSJJAG00000013113	Polr1a	100	85.640	Jaculus_jaculus
ENSCGRG00001006651	Polr1a	100	59.640	ENSKMAG00000007399	polr1a	100	59.268	Kryptolebias_marmoratus
ENSCGRG00001006651	Polr1a	94	77.607	ENSLBEG00000015401	polr1a	95	77.607	Labrus_bergylta
ENSCGRG00001006651	Polr1a	51	67.935	ENSLACG00000003218	polr1a	99	67.935	Latimeria_chalumnae
ENSCGRG00001006651	Polr1a	100	64.945	ENSLOCG00000010881	polr1a	100	64.925	Lepisosteus_oculatus
ENSCGRG00001006651	Polr1a	100	89.048	ENSLAFG00000014948	POLR1A	96	89.048	Loxodonta_africana
ENSCGRG00001006651	Polr1a	100	83.092	ENSMFAG00000046097	POLR1A	96	89.507	Macaca_fascicularis
ENSCGRG00001006651	Polr1a	100	83.092	ENSMMUG00000015815	POLR1A	96	89.507	Macaca_mulatta
ENSCGRG00001006651	Polr1a	100	83.034	ENSMNEG00000043313	POLR1A	96	89.507	Macaca_nemestrina
ENSCGRG00001006651	Polr1a	100	82.455	ENSMLEG00000042428	POLR1A	100	82.207	Mandrillus_leucophaeus
ENSCGRG00001006651	Polr1a	100	67.619	ENSMAMG00000016565	polr1a	96	67.619	Mastacembelus_armatus
ENSCGRG00001006651	Polr1a	100	66.088	ENSMZEG00005004915	polr1a	96	66.088	Maylandia_zebra
ENSCGRG00001006651	Polr1a	99	71.270	ENSMGAG00000013111	POLR1A	96	71.270	Meleagris_gallopavo
ENSCGRG00001006651	Polr1a	91	92.186	ENSMAUG00000008497	Polr1a	100	92.186	Mesocricetus_auratus
ENSCGRG00001006651	Polr1a	100	83.507	ENSMICG00000000757	POLR1A	100	83.391	Microcebus_murinus
ENSCGRG00001006651	Polr1a	100	90.512	ENSMOCG00000000122	Polr1a	100	90.047	Microtus_ochrogaster
ENSCGRG00001006651	Polr1a	100	60.976	ENSMMOG00000010216	polr1a	100	60.976	Mola_mola
ENSCGRG00001006651	Polr1a	100	80.095	ENSMODG00000009335	POLR1A	77	81.624	Monodelphis_domestica
ENSCGRG00001006651	Polr1a	100	66.508	ENSMALG00000013363	polr1a	96	66.508	Monopterus_albus
ENSCGRG00001006651	Polr1a	100	87.551	MGP_CAROLIEiJ_G0028494	Polr1a	100	90.457	Mus_caroli
ENSCGRG00001006651	Polr1a	100	87.667	ENSMUSG00000049553	Polr1a	99	90.457	Mus_musculus
ENSCGRG00001006651	Polr1a	100	88.359	MGP_PahariEiJ_G0022230	Polr1a	100	91.117	Mus_pahari
ENSCGRG00001006651	Polr1a	100	85.878	MGP_SPRETEiJ_G0029499	Polr1a	100	90.726	Mus_spretus
ENSCGRG00001006651	Polr1a	100	83.652	ENSMPUG00000009135	POLR1A	100	83.652	Mustela_putorius_furo
ENSCGRG00001006651	Polr1a	100	82.687	ENSMLUG00000015723	POLR1A	100	82.687	Myotis_lucifugus
ENSCGRG00001006651	Polr1a	100	94.118	ENSNGAG00000017907	Polr1a	96	94.118	Nannospalax_galili
ENSCGRG00001006651	Polr1a	100	61.311	ENSNBRG00000000519	polr1a	96	66.088	Neolamprologus_brichardi
ENSCGRG00001006651	Polr1a	100	89.666	ENSNLEG00000002264	POLR1A	96	89.666	Nomascus_leucogenys
ENSCGRG00001006651	Polr1a	74	93.701	ENSMEUG00000011665	-	72	93.701	Notamacropus_eugenii
ENSCGRG00001006651	Polr1a	99	76.928	ENSOPRG00000008269	POLR1A	100	76.502	Ochotona_princeps
ENSCGRG00001006651	Polr1a	100	84.526	ENSODEG00000003542	POLR1A	100	84.759	Octodon_degus
ENSCGRG00001006651	Polr1a	100	61.681	ENSONIG00000015895	polr1a	100	61.343	Oreochromis_niloticus
ENSCGRG00001006651	Polr1a	100	84.893	ENSOCUG00000010138	POLR1A	100	84.884	Oryctolagus_cuniculus
ENSCGRG00001006651	Polr1a	100	59.130	ENSORLG00000008753	polr1a	99	58.991	Oryzias_latipes
ENSCGRG00001006651	Polr1a	100	57.797	ENSORLG00020020726	polr1a	99	57.688	Oryzias_latipes_hni
ENSCGRG00001006651	Polr1a	97	73.404	ENSORLG00015016071	polr1a	96	73.333	Oryzias_latipes_hsok
ENSCGRG00001006651	Polr1a	100	84.366	ENSOGAG00000004031	POLR1A	100	84.134	Otolemur_garnettii
ENSCGRG00001006651	Polr1a	100	82.143	ENSOARG00000020601	POLR1A	100	82.775	Ovis_aries
ENSCGRG00001006651	Polr1a	100	89.825	ENSPPAG00000042450	POLR1A	96	89.825	Pan_paniscus
ENSCGRG00001006651	Polr1a	100	83.130	ENSPPRG00000006702	POLR1A	100	82.793	Panthera_pardus
ENSCGRG00001006651	Polr1a	100	82.669	ENSPTIG00000018783	POLR1A	100	82.333	Panthera_tigris_altaica
ENSCGRG00001006651	Polr1a	100	89.507	ENSPTRG00000012147	POLR1A	96	89.507	Pan_troglodytes
ENSCGRG00001006651	Polr1a	100	83.324	ENSPANG00000025908	POLR1A	96	89.507	Papio_anubis
ENSCGRG00001006651	Polr1a	94	75.853	ENSPKIG00000005468	polr1a	95	75.853	Paramormyrops_kingsleyae
ENSCGRG00001006651	Polr1a	62	71.456	ENSPSIG00000009321	-	95	71.096	Pelodiscus_sinensis
ENSCGRG00001006651	Polr1a	53	57.537	ENSPMGG00000009718	polr1a	95	57.537	Periophthalmus_magnuspinnatus
ENSCGRG00001006651	Polr1a	100	91.041	ENSPEMG00000022224	Polr1a	96	97.297	Peromyscus_maniculatus_bairdii
ENSCGRG00001006651	Polr1a	95	81.319	ENSPCIG00000004222	POLR1A	95	81.319	Phascolarctos_cinereus
ENSCGRG00001006651	Polr1a	100	60.369	ENSPFOG00000005025	polr1a	100	59.676	Poecilia_formosa
ENSCGRG00001006651	Polr1a	100	61.208	ENSPLAG00000021389	polr1a	100	59.988	Poecilia_latipinna
ENSCGRG00001006651	Polr1a	100	58.664	ENSPMEG00000006463	polr1a	100	58.333	Poecilia_mexicana
ENSCGRG00001006651	Polr1a	100	59.355	ENSPREG00000002389	polr1a	100	59.733	Poecilia_reticulata
ENSCGRG00001006651	Polr1a	100	88.076	ENSPPYG00000012217	POLR1A	96	88.076	Pongo_abelii
ENSCGRG00001006651	Polr1a	92	88.000	ENSPCAG00000011582	POLR1A	88	88.000	Procavia_capensis
ENSCGRG00001006651	Polr1a	100	83.507	ENSPCOG00000026987	POLR1A	96	89.666	Propithecus_coquereli
ENSCGRG00001006651	Polr1a	95	95.769	ENSPVAG00000012674	POLR1A	92	95.769	Pteropus_vampyrus
ENSCGRG00001006651	Polr1a	100	60.967	ENSPNYG00000000026	polr1a	96	66.088	Pundamilia_nyererei
ENSCGRG00001006651	Polr1a	100	66.930	ENSPNAG00000019223	polr1a	96	67.604	Pygocentrus_nattereri
ENSCGRG00001006651	Polr1a	100	89.290	ENSRNOG00000009545	Polr1a	100	89.115	Rattus_norvegicus
ENSCGRG00001006651	Polr1a	100	82.513	ENSRBIG00000028335	POLR1A	100	82.149	Rhinopithecus_bieti
ENSCGRG00001006651	Polr1a	100	82.455	ENSRROG00000031473	POLR1A	100	82.091	Rhinopithecus_roxellana
ENSCGRG00001006651	Polr1a	99	35.198	YOR341W	RPA190	99	35.524	Saccharomyces_cerevisiae
ENSCGRG00001006651	Polr1a	100	82.050	ENSSBOG00000030262	POLR1A	100	82.166	Saimiri_boliviensis_boliviensis
ENSCGRG00001006651	Polr1a	100	78.425	ENSSHAG00000014739	POLR1A	96	78.425	Sarcophilus_harrisii
ENSCGRG00001006651	Polr1a	100	70.111	ENSSFOG00015019716	polr1a	96	70.111	Scleropages_formosus
ENSCGRG00001006651	Polr1a	100	66.139	ENSSMAG00000014342	polr1a	96	66.139	Scophthalmus_maximus
ENSCGRG00001006651	Polr1a	100	67.508	ENSSDUG00000014631	polr1a	96	67.508	Seriola_dumerili
ENSCGRG00001006651	Polr1a	100	65.336	ENSSLDG00000024095	polr1a	94	69.068	Seriola_lalandi_dorsalis
ENSCGRG00001006651	Polr1a	74	96.809	ENSSARG00000003136	-	71	96.809	Sorex_araneus
ENSCGRG00001006651	Polr1a	94	76.410	ENSSPUG00000004215	POLR1A	98	76.410	Sphenodon_punctatus
ENSCGRG00001006651	Polr1a	62	79.937	ENSSPAG00000016341	polr1a	89	79.937	Stegastes_partitus
ENSCGRG00001006651	Polr1a	83	83.310	ENSSSCG00000008226	POLR1A	99	83.263	Sus_scrofa
ENSCGRG00001006651	Polr1a	99	70.559	ENSTGUG00000010704	POLR1A	96	70.559	Taeniopygia_guttata
ENSCGRG00001006651	Polr1a	100	64.557	ENSTRUG00000002210	polr1a	97	64.557	Takifugu_rubripes
ENSCGRG00001006651	Polr1a	100	59.306	ENSTNIG00000010116	polr1a	96	59.306	Tetraodon_nigroviridis
ENSCGRG00001006651	Polr1a	73	98.148	ENSTBEG00000008646	POLR1A	70	98.148	Tupaia_belangeri
ENSCGRG00001006651	Polr1a	100	79.502	ENSTTRG00000008597	POLR1A	96	89.030	Tursiops_truncatus
ENSCGRG00001006651	Polr1a	67	80.694	ENSUAMG00000012158	-	94	80.492	Ursus_americanus
ENSCGRG00001006651	Polr1a	100	82.435	ENSUMAG00000006700	POLR1A	100	82.193	Ursus_maritimus
ENSCGRG00001006651	Polr1a	100	85.170	ENSVVUG00000001245	POLR1A	100	85.170	Vulpes_vulpes
ENSCGRG00001006651	Polr1a	100	63.715	ENSXETG00000001952	polr1a	100	64.061	Xenopus_tropicalis
ENSCGRG00001006651	Polr1a	100	61.021	ENSXMAG00000004032	polr1a	100	59.687	Xiphophorus_maculatus