EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001006656 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 504 bases
Position: chrscaffold_0:99108618-99109121
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005110	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001007802	-	477	-	ENSCGRP00001005110	158 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001006656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001006656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001006656	-	69	46.043	ENSCGRG00001018245	Srsf7	72	46.512
ENSCGRG00001006656	-	61	86.458	ENSCGRG00001014666	-	100	76.829
ENSCGRG00001006656	-	52	32.184	ENSCGRG00001021763	Cirbp	51	32.184
ENSCGRG00001006656	-	97	66.038	ENSCGRG00001024550	-	98	75.472
ENSCGRG00001006656	-	96	65.563	ENSCGRG00001022756	-	94	60.927
ENSCGRG00001006656	-	58	73.913	ENSCGRG00001010936	-	97	73.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001006656	-	61	86.458	ENSAPLG00000013776	SRSF3	100	71.687	Anas_platyrhynchos
ENSCGRG00001006656	-	54	62.353	ENSCSAVG00000002676	-	53	59.794	Ciona_savignyi
ENSCGRG00001006656	-	94	67.532	ENSCGRG00000019294	-	100	76.923	Cricetulus_griseus_crigri
ENSCGRG00001006656	-	100	100.000	ENSCGRG00000007542	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001006656	-	79	73.846	ENSODEG00000003509	-	97	69.655	Octodon_degus
ENSCGRG00001006656	-	61	85.417	ENSPKIG00000001408	-	97	73.171	Paramormyrops_kingsleyae
ENSCGRG00001006656	-	92	64.667	ENSPCIG00000007090	-	97	68.519	Phascolarctos_cinereus