EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001007103 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 26602 bases
Position: chrscaffold_37:6981036-7007637
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005499	KH_1	PF00013.29	1.4e-69	1	4
ENSCGRP00001005499	KH_1	PF00013.29	1.4e-69	2	4
ENSCGRP00001005499	KH_1	PF00013.29	1.4e-69	3	4
ENSCGRP00001005499	KH_1	PF00013.29	1.4e-69	4	4
ENSCGRP00001005494	KH_1	PF00013.29	1.5e-69	1	4
ENSCGRP00001005494	KH_1	PF00013.29	1.5e-69	2	4
ENSCGRP00001005494	KH_1	PF00013.29	1.5e-69	3	4
ENSCGRP00001005494	KH_1	PF00013.29	1.5e-69	4	4
ENSCGRP00001005503	KH_1	PF00013.29	1.7e-69	1	4
ENSCGRP00001005503	KH_1	PF00013.29	1.7e-69	2	4
ENSCGRP00001005503	KH_1	PF00013.29	1.7e-69	3	4
ENSCGRP00001005503	KH_1	PF00013.29	1.7e-69	4	4
ENSCGRP00001005473	KH_1	PF00013.29	1.8e-69	1	4
ENSCGRP00001005473	KH_1	PF00013.29	1.8e-69	2	4
ENSCGRP00001005473	KH_1	PF00013.29	1.8e-69	3	4
ENSCGRP00001005473	KH_1	PF00013.29	1.8e-69	4	4
ENSCGRP00001005499	KH_2	PF07650.17	1.5e-22	1	2
ENSCGRP00001005499	KH_2	PF07650.17	1.5e-22	2	2
ENSCGRP00001005494	KH_2	PF07650.17	1.6e-22	1	2
ENSCGRP00001005494	KH_2	PF07650.17	1.6e-22	2	2
ENSCGRP00001005503	KH_2	PF07650.17	1.8e-22	1	2
ENSCGRP00001005503	KH_2	PF07650.17	1.8e-22	2	2
ENSCGRP00001005473	KH_2	PF07650.17	2.1e-22	1	2
ENSCGRP00001005473	KH_2	PF07650.17	2.1e-22	2	2
ENSCGRP00001005499	DUF1897	PF09005.10	9.3e-12	1	2
ENSCGRP00001005499	DUF1897	PF09005.10	9.3e-12	2	2
ENSCGRP00001005494	DUF1897	PF09005.10	9.8e-12	1	2
ENSCGRP00001005494	DUF1897	PF09005.10	9.8e-12	2	2
ENSCGRP00001005503	DUF1897	PF09005.10	1e-11	1	2
ENSCGRP00001005503	DUF1897	PF09005.10	1e-11	2	2
ENSCGRP00001005473	DUF1897	PF09005.10	1.1e-11	1	2
ENSCGRP00001005473	DUF1897	PF09005.10	1.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001008432	-	2266	-	ENSCGRP00001005473	664 (aa)	-	-
ENSCGRT00001008465	-	1929	-	ENSCGRP00001005494	642 (aa)	-	-
ENSCGRT00001008475	-	1890	-	ENSCGRP00001005499	629 (aa)	-	-
ENSCGRT00001008482	-	1962	-	ENSCGRP00001005503	653 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001007103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001007103's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001007103	Fubp1	57	30.667	ENSCGRG00001015078	Pcbp1	71	30.137
ENSCGRG00001007103	Fubp1	94	53.571	ENSCGRG00001011076	Fubp3	83	64.884
ENSCGRG00001007103	Fubp1	60	34.524	ENSCGRG00001014953	Pcbp4	77	34.524
ENSCGRG00001007103	Fubp1	58	32.456	ENSCGRG00001024030	Nova1	60	32.456
ENSCGRG00001007103	Fubp1	94	60.781	ENSCGRG00001011031	Khsrp	60	68.807
ENSCGRG00001007103	Fubp1	53	40.625	ENSCGRG00001006836	Pcbp3	66	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001007103	Fubp1	100	98.176	ENSG00000162613	FUBP1	100	98.176	Homo_sapiens
ENSCGRG00001007103	Fubp1	99	70.833	ENSAPOG00000014845	fubp1	70	76.872	Acanthochromis_polyacanthus
ENSCGRG00001007103	Fubp1	100	94.925	ENSAMEG00000007372	FUBP1	100	94.925	Ailuropoda_melanoleuca
ENSCGRG00001007103	Fubp1	100	69.692	ENSACIG00000020024	fubp1	69	74.723	Amphilophus_citrinellus
ENSCGRG00001007103	Fubp1	100	68.210	ENSAPEG00000012232	fubp1	72	78.319	Amphiprion_percula
ENSCGRG00001007103	Fubp1	99	72.118	ENSATEG00000018619	fubp1	70	79.464	Anabas_testudineus
ENSCGRG00001007103	Fubp1	94	96.700	ENSAPLG00000005965	FUBP1	100	96.860	Anas_platyrhynchos
ENSCGRG00001007103	Fubp1	99	86.423	ENSACAG00000006310	FUBP1	96	86.715	Anolis_carolinensis
ENSCGRG00001007103	Fubp1	99	71.692	ENSACLG00000006708	fubp1	72	79.018	Astatotilapia_calliptera
ENSCGRG00001007103	Fubp1	90	77.799	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSCGRG00001007103	Fubp1	100	98.145	ENSCJAG00000007062	FUBP1	100	98.145	Callithrix_jacchus
ENSCGRG00001007103	Fubp1	100	98.300	ENSCAFG00000020361	FUBP1	100	98.300	Canis_familiaris
ENSCGRG00001007103	Fubp1	95	98.382	ENSTSYG00000000148	FUBP1	100	98.382	Carlito_syrichta
ENSCGRG00001007103	Fubp1	59	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSCGRG00001007103	Fubp1	100	98.480	ENSCPOG00000002757	FUBP1	100	98.480	Cavia_porcellus
ENSCGRG00001007103	Fubp1	100	82.659	ENSCCAG00000036537	FUBP1	100	82.948	Cebus_capucinus
ENSCGRG00001007103	Fubp1	100	98.145	ENSCATG00000042126	FUBP1	100	98.145	Cercocebus_atys
ENSCGRG00001007103	Fubp1	100	98.328	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSCGRG00001007103	Fubp1	100	98.145	ENSCSAG00000001402	FUBP1	100	98.145	Chlorocebus_sabaeus
ENSCGRG00001007103	Fubp1	100	98.024	ENSCHOG00000008177	FUBP1	100	98.024	Choloepus_hoffmanni
ENSCGRG00001007103	Fubp1	95	100.000	ENSCGRG00000003372	Fubp1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001007103	Fubp1	100	71.032	ENSCSEG00000021412	fubp1	69	78.571	Cynoglossus_semilaevis
ENSCGRG00001007103	Fubp1	99	69.585	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSCGRG00001007103	Fubp1	100	70.270	ENSDARG00000029248	fubp1	70	78.214	Danio_rerio
ENSCGRG00001007103	Fubp1	81	70.370	ENSDNOG00000034565	-	82	71.084	Dasypus_novemcinctus
ENSCGRG00001007103	Fubp1	100	97.872	ENSDORG00000016534	Fubp1	100	97.872	Dipodomys_ordii
ENSCGRG00001007103	Fubp1	77	98.834	ENSETEG00000000948	-	62	98.834	Echinops_telfairi
ENSCGRG00001007103	Fubp1	88	46.101	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSCGRG00001007103	Fubp1	90	97.959	ENSEEUG00000001287	FUBP1	100	84.650	Erinaceus_europaeus
ENSCGRG00001007103	Fubp1	100	68.541	ENSELUG00000007990	fubp1	70	75.930	Esox_lucius
ENSCGRG00001007103	Fubp1	70	97.124	ENSFALG00000005768	FUBP1	69	97.118	Ficedula_albicollis
ENSCGRG00001007103	Fubp1	100	98.024	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSCGRG00001007103	Fubp1	100	71.756	ENSFHEG00000005230	fubp1	70	80.134	Fundulus_heteroclitus
ENSCGRG00001007103	Fubp1	100	66.564	ENSGMOG00000003370	fubp1	70	70.510	Gadus_morhua
ENSCGRG00001007103	Fubp1	100	95.827	ENSGALG00000008939	FUBP1	100	95.827	Gallus_gallus
ENSCGRG00001007103	Fubp1	100	70.420	ENSGAFG00000020972	fubp1	91	78.899	Gambusia_affinis
ENSCGRG00001007103	Fubp1	100	70.706	ENSGACG00000016563	fubp1	70	76.940	Gasterosteus_aculeatus
ENSCGRG00001007103	Fubp1	100	70.282	ENSHBUG00000009835	fubp1	85	77.778	Haplochromis_burtoni
ENSCGRG00001007103	Fubp1	71	91.503	ENSHGLG00000002808	-	72	90.110	Heterocephalus_glaber_female
ENSCGRG00001007103	Fubp1	100	98.632	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSCGRG00001007103	Fubp1	100	98.632	ENSHGLG00100003417	-	100	98.632	Heterocephalus_glaber_male
ENSCGRG00001007103	Fubp1	71	92.375	ENSHGLG00100001414	-	72	90.769	Heterocephalus_glaber_male
ENSCGRG00001007103	Fubp1	100	68.759	ENSHCOG00000000910	fubp1	70	76.356	Hippocampus_comes
ENSCGRG00001007103	Fubp1	100	74.085	ENSIPUG00000009896	fubp1	70	79.157	Ictalurus_punctatus
ENSCGRG00001007103	Fubp1	100	98.784	ENSSTOG00000014312	FUBP1	100	98.784	Ictidomys_tridecemlineatus
ENSCGRG00001007103	Fubp1	100	97.836	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSCGRG00001007103	Fubp1	100	70.769	ENSKMAG00000018897	fubp1	69	78.125	Kryptolebias_marmoratus
ENSCGRG00001007103	Fubp1	100	67.718	ENSLBEG00000012700	fubp1	72	76.180	Labrus_bergylta
ENSCGRG00001007103	Fubp1	98	71.852	ENSLOCG00000003745	fubp1	92	74.948	Lepisosteus_oculatus
ENSCGRG00001007103	Fubp1	100	95.569	ENSLAFG00000003273	FUBP1	100	98.378	Loxodonta_africana
ENSCGRG00001007103	Fubp1	100	98.024	ENSMFAG00000031825	FUBP1	100	98.024	Macaca_fascicularis
ENSCGRG00001007103	Fubp1	100	98.145	ENSMMUG00000002899	FUBP1	100	98.145	Macaca_mulatta
ENSCGRG00001007103	Fubp1	100	98.145	ENSMNEG00000045212	FUBP1	100	98.145	Macaca_nemestrina
ENSCGRG00001007103	Fubp1	100	71.779	ENSMZEG00005024298	fubp1	70	79.646	Maylandia_zebra
ENSCGRG00001007103	Fubp1	95	96.223	ENSMGAG00000009424	FUBP1	100	96.223	Meleagris_gallopavo
ENSCGRG00001007103	Fubp1	100	98.632	ENSMAUG00000016428	Fubp1	100	98.632	Mesocricetus_auratus
ENSCGRG00001007103	Fubp1	100	99.541	ENSMOCG00000014751	Fubp1	100	99.541	Microtus_ochrogaster
ENSCGRG00001007103	Fubp1	91	73.684	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCGRG00001007103	Fubp1	96	90.454	ENSMODG00000020804	FUBP1	100	90.596	Monodelphis_domestica
ENSCGRG00001007103	Fubp1	100	71.057	ENSMALG00000015173	fubp1	70	78.571	Monopterus_albus
ENSCGRG00001007103	Fubp1	100	98.930	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.930	Mus_caroli
ENSCGRG00001007103	Fubp1	100	98.624	ENSMUSG00000028034	Fubp1	100	98.624	Mus_musculus
ENSCGRG00001007103	Fubp1	100	99.084	MGP_PahariEiJ_G0027191	Fubp1	100	99.084	Mus_pahari
ENSCGRG00001007103	Fubp1	100	98.777	MGP_SPRETEiJ_G0026693	Fubp1	100	98.777	Mus_spretus
ENSCGRG00001007103	Fubp1	100	94.337	ENSMLUG00000014802	FUBP1	100	94.337	Myotis_lucifugus
ENSCGRG00001007103	Fubp1	100	95.886	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSCGRG00001007103	Fubp1	100	68.478	ENSNBRG00000015099	fubp1	72	79.018	Neolamprologus_brichardi
ENSCGRG00001007103	Fubp1	100	94.394	ENSNLEG00000009772	FUBP1	100	94.394	Nomascus_leucogenys
ENSCGRG00001007103	Fubp1	91	97.674	ENSMEUG00000007917	-	79	97.674	Notamacropus_eugenii
ENSCGRG00001007103	Fubp1	90	98.507	ENSOPRG00000001175	FUBP1	91	96.644	Ochotona_princeps
ENSCGRG00001007103	Fubp1	100	98.176	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSCGRG00001007103	Fubp1	99	67.500	ENSODEG00000003657	-	100	66.719	Octodon_degus
ENSCGRG00001007103	Fubp1	99	70.492	ENSONIG00000018381	fubp1	69	79.646	Oreochromis_niloticus
ENSCGRG00001007103	Fubp1	92	92.434	ENSOANG00000009777	FUBP1	99	92.422	Ornithorhynchus_anatinus
ENSCGRG00001007103	Fubp1	99	68.643	ENSORLG00000003540	fubp1	71	79.018	Oryzias_latipes
ENSCGRG00001007103	Fubp1	99	69.643	ENSORLG00020005908	fubp1	70	78.348	Oryzias_latipes_hni
ENSCGRG00001007103	Fubp1	99	71.295	ENSORLG00015008779	fubp1	69	79.464	Oryzias_latipes_hsok
ENSCGRG00001007103	Fubp1	100	70.762	ENSOMEG00000021943	fubp1	70	77.060	Oryzias_melastigma
ENSCGRG00001007103	Fubp1	100	94.643	ENSOGAG00000014233	FUBP1	100	94.643	Otolemur_garnettii
ENSCGRG00001007103	Fubp1	100	95.052	ENSOARG00000013259	FUBP1	100	94.903	Ovis_aries
ENSCGRG00001007103	Fubp1	100	98.328	ENSPPRG00000000413	FUBP1	100	98.328	Panthera_pardus
ENSCGRG00001007103	Fubp1	100	98.328	ENSPTIG00000019450	FUBP1	100	98.328	Panthera_tigris_altaica
ENSCGRG00001007103	Fubp1	93	95.973	ENSPSIG00000012965	FUBP1	100	95.973	Pelodiscus_sinensis
ENSCGRG00001007103	Fubp1	99	71.517	ENSPMGG00000009060	fubp1	71	77.753	Periophthalmus_magnuspinnatus
ENSCGRG00001007103	Fubp1	100	99.387	ENSPEMG00000021802	Fubp1	100	99.387	Peromyscus_maniculatus_bairdii
ENSCGRG00001007103	Fubp1	59	60.729	ENSPMAG00000001644	-	90	64.414	Petromyzon_marinus
ENSCGRG00001007103	Fubp1	100	69.970	ENSPFOG00000000238	fubp1	91	72.269	Poecilia_formosa
ENSCGRG00001007103	Fubp1	100	69.029	ENSPLAG00000021170	fubp1	72	80.134	Poecilia_latipinna
ENSCGRG00001007103	Fubp1	99	72.628	ENSPMEG00000004747	fubp1	73	80.134	Poecilia_mexicana
ENSCGRG00001007103	Fubp1	99	71.822	ENSPREG00000017911	fubp1	70	80.134	Poecilia_reticulata
ENSCGRG00001007103	Fubp1	71	98.052	ENSPPYG00000001219	-	70	98.265	Pongo_abelii
ENSCGRG00001007103	Fubp1	100	98.021	ENSPCAG00000012617	FUBP1	100	98.021	Procavia_capensis
ENSCGRG00001007103	Fubp1	100	98.328	ENSPCOG00000024974	FUBP1	100	98.328	Propithecus_coquereli
ENSCGRG00001007103	Fubp1	100	93.921	ENSPVAG00000014637	FUBP1	100	93.921	Pteropus_vampyrus
ENSCGRG00001007103	Fubp1	100	71.779	ENSPNYG00000004552	fubp1	73	79.510	Pundamilia_nyererei
ENSCGRG00001007103	Fubp1	100	72.255	ENSPNAG00000016207	fubp1	87	78.289	Pygocentrus_nattereri
ENSCGRG00001007103	Fubp1	100	99.067	ENSRNOG00000043370	Fubp1	100	99.067	Rattus_norvegicus
ENSCGRG00001007103	Fubp1	100	98.145	ENSRBIG00000042950	FUBP1	100	98.145	Rhinopithecus_bieti
ENSCGRG00001007103	Fubp1	100	98.145	ENSRROG00000043534	FUBP1	100	98.145	Rhinopithecus_roxellana
ENSCGRG00001007103	Fubp1	100	98.300	ENSSBOG00000027299	FUBP1	100	98.300	Saimiri_boliviensis_boliviensis
ENSCGRG00001007103	Fubp1	95	97.213	ENSSHAG00000005367	FUBP1	100	98.734	Sarcophilus_harrisii
ENSCGRG00001007103	Fubp1	100	73.393	ENSSFOG00015010213	fubp1	70	80.444	Scleropages_formosus
ENSCGRG00001007103	Fubp1	99	70.287	ENSSDUG00000007383	fubp1	68	77.996	Seriola_dumerili
ENSCGRG00001007103	Fubp1	100	70.376	ENSSLDG00000022863	fubp1	72	77.605	Seriola_lalandi_dorsalis
ENSCGRG00001007103	Fubp1	100	94.982	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSCGRG00001007103	Fubp1	100	88.792	ENSSPUG00000008389	FUBP1	100	88.663	Sphenodon_punctatus
ENSCGRG00001007103	Fubp1	99	72.516	ENSSPAG00000010161	fubp1	69	78.795	Stegastes_partitus
ENSCGRG00001007103	Fubp1	94	95.588	ENSTGUG00000006841	FUBP1	100	95.745	Taeniopygia_guttata
ENSCGRG00001007103	Fubp1	94	72.112	ENSTRUG00000004615	fubp1	65	78.808	Takifugu_rubripes
ENSCGRG00001007103	Fubp1	54	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSCGRG00001007103	Fubp1	83	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCGRG00001007103	Fubp1	100	98.176	ENSTTRG00000000096	FUBP1	100	98.176	Tursiops_truncatus
ENSCGRG00001007103	Fubp1	99	98.162	ENSVPAG00000004709	FUBP1	100	98.162	Vicugna_pacos
ENSCGRG00001007103	Fubp1	100	69.029	ENSXCOG00000019354	fubp1	72	78.125	Xiphophorus_couchianus
ENSCGRG00001007103	Fubp1	97	72.222	ENSXMAG00000007168	fubp1	73	79.911	Xiphophorus_maculatus