EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001007115 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 3047 bases
Position: chrscaffold_0:126350105-126353151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	1	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	2	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	3	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	4	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	5	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	6	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	7	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	8	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	9	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	10	11
ENSCGRP00001005412	zf-C2H2	PF00096.26	1e-58	11	11
ENSCGRP00001005412	zf-met	PF12874.7	4.7e-12	1	2
ENSCGRP00001005412	zf-met	PF12874.7	4.7e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001008326	-	1288	-	ENSCGRP00001005412	411 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001007115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001007115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001007115	-	85	46.429	ENSCGRG00001001429	Zfp574	93	44.628
ENSCGRG00001007115	-	89	49.051	ENSCGRG00001012523	-	97	49.051
ENSCGRG00001007115	-	80	46.753	ENSCGRG00001013598	Zfp865	76	39.698
ENSCGRG00001007115	-	79	35.965	ENSCGRG00001004071	Patz1	52	31.298
ENSCGRG00001007115	-	99	52.516	ENSCGRG00001000576	Zfp26	88	52.516
ENSCGRG00001007115	-	77	38.272	ENSCGRG00001023063	Zfp423	89	35.185
ENSCGRG00001007115	-	83	46.073	ENSCGRG00001019468	Zfp628	59	46.316
ENSCGRG00001007115	-	99	40.633	ENSCGRG00001010967	Zfp1	98	40.633
ENSCGRG00001007115	-	96	53.012	ENSCGRG00001023858	Zfp560	73	53.012
ENSCGRG00001007115	-	92	42.446	ENSCGRG00001010581	Prdm5	89	40.161
ENSCGRG00001007115	-	87	44.402	ENSCGRG00001004047	-	74	44.795
ENSCGRG00001007115	-	83	39.764	ENSCGRG00001009557	Zfp319	91	36.390
ENSCGRG00001007115	-	100	56.039	ENSCGRG00001024303	-	98	56.039
ENSCGRG00001007115	-	91	52.191	ENSCGRG00001013367	Zfp61	79	52.191
ENSCGRG00001007115	-	79	33.459	ENSCGRG00001008879	Maz	62	34.507
ENSCGRG00001007115	-	99	45.667	ENSCGRG00001010752	2610008E11Rik	98	45.667
ENSCGRG00001007115	-	100	49.524	ENSCGRG00001002406	Zfp39	91	49.524
ENSCGRG00001007115	-	76	42.991	ENSCGRG00001013674	Snai2	55	42.991
ENSCGRG00001007115	-	75	45.679	ENSCGRG00001013279	Zfp784	66	33.488
ENSCGRG00001007115	-	84	45.752	ENSCGRG00001019408	Zbtb17	55	45.752
ENSCGRG00001007115	-	85	51.140	ENSCGRG00001012640	Zfp94	83	51.140
ENSCGRG00001007115	-	100	47.619	ENSCGRG00001013602	-	97	47.619
ENSCGRG00001007115	-	90	56.349	ENSCGRG00001019143	-	90	56.349
ENSCGRG00001007115	-	100	39.286	ENSCGRG00001018100	Zfp202	64	39.286
ENSCGRG00001007115	-	84	50.570	ENSCGRG00001015424	-	84	50.570
ENSCGRG00001007115	-	82	52.427	ENSCGRG00001011966	Zfp715	74	52.427
ENSCGRG00001007115	-	76	47.059	ENSCGRG00001011389	Snai3	55	46.512
ENSCGRG00001007115	-	100	57.333	ENSCGRG00001012803	-	94	57.333
ENSCGRG00001007115	-	99	54.054	ENSCGRG00001021088	Zfp354a	98	54.054
ENSCGRG00001007115	-	100	50.452	ENSCGRG00001024630	-	96	50.452
ENSCGRG00001007115	-	80	37.006	ENSCGRG00001017330	Repin1	83	37.006
ENSCGRG00001007115	-	93	42.071	ENSCGRG00001002297	-	99	42.071
ENSCGRG00001007115	-	100	47.826	ENSCGRG00001006591	Zkscan3	58	47.826
ENSCGRG00001007115	-	99	48.734	ENSCGRG00001007163	-	99	48.734
ENSCGRG00001007115	-	77	50.193	ENSCGRG00001013561	Zfp768	53	50.193
ENSCGRG00001007115	-	99	51.481	ENSCGRG00001020646	Gm3854	95	51.481
ENSCGRG00001007115	-	84	52.581	ENSCGRG00001017579	Zfp112	59	52.581
ENSCGRG00001007115	-	99	48.852	ENSCGRG00001001639	Zfp882	99	48.852
ENSCGRG00001007115	-	100	54.828	ENSCGRG00001013939	Zfp454	98	54.828
ENSCGRG00001007115	-	93	45.714	ENSCGRG00001012398	Zfp236	69	44.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001007115	-	100	99.757	ENSCGRG00000004206	-	100	99.757	Cricetulus_griseus_crigri
ENSCGRG00001007115	-	100	65.263	ENSMOCG00000017127	-	99	65.263	Microtus_ochrogaster
ENSCGRG00001007115	-	100	65.441	ENSMUSG00000114923	Gm49345	98	63.291	Mus_musculus