EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001007163 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 3987 bases
Position: chrscaffold_88:477756-481742
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	1	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	2	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	3	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	4	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	5	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	6	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	7	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	8	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	9	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	10	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	11	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	12	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	13	14
ENSCGRP00001005451	zf-C2H2	PF00096.26	9e-80	14	14
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	1	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	2	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	3	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	4	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	5	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	6	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	7	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	8	9
ENSCGRP00001005466	zf-C2H2	PF00096.26	4.8e-50	9	9
ENSCGRP00001005451	zf-met	PF12874.7	4.4e-16	1	2
ENSCGRP00001005451	zf-met	PF12874.7	4.4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001008418	-	1470	-	ENSCGRP00001005466	490 (aa)	-	-
ENSCGRT00001008396	-	1794	-	ENSCGRP00001005451	598 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001007163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001007163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001007163	-	99	50.000	ENSCGRG00001012803	-	94	49.115
ENSCGRG00001007163	-	82	53.409	ENSCGRG00001010581	Prdm5	86	40.702
ENSCGRG00001007163	-	85	41.706	ENSCGRG00001019408	Zbtb17	61	42.151
ENSCGRG00001007163	-	95	35.404	ENSCGRG00001021210	Zfp131	57	39.316
ENSCGRG00001007163	-	79	48.980	ENSCGRG00001023314	-	56	43.284
ENSCGRG00001007163	-	84	50.144	ENSCGRG00001013602	-	96	50.144
ENSCGRG00001007163	-	85	49.536	ENSCGRG00001012640	Zfp94	78	49.536
ENSCGRG00001007163	-	99	50.704	ENSCGRG00001013939	Zfp454	97	50.704
ENSCGRG00001007163	-	83	33.333	ENSCGRG00001013598	Zfp865	81	33.333
ENSCGRG00001007163	-	99	48.276	ENSCGRG00001024630	-	97	48.276
ENSCGRG00001007163	-	67	37.209	ENSCGRG00001023063	Zfp423	83	37.209
ENSCGRG00001007163	-	99	49.020	ENSCGRG00001020646	Gm3854	99	49.515
ENSCGRG00001007163	-	80	36.765	ENSCGRG00001013674	Snai2	75	36.765
ENSCGRG00001007163	-	82	37.013	ENSCGRG00001008879	Maz	68	31.000
ENSCGRG00001007163	-	100	47.269	ENSCGRG00001010752	2610008E11Rik	94	47.269
ENSCGRG00001007163	-	75	37.963	ENSCGRG00001007749	Snai1	62	37.963
ENSCGRG00001007163	-	82	49.593	ENSCGRG00001013367	Zfp61	78	49.593
ENSCGRG00001007163	-	92	54.386	ENSCGRG00001004047	-	65	54.386
ENSCGRG00001007163	-	82	46.386	ENSCGRG00001019468	Zfp628	63	46.386
ENSCGRG00001007163	-	91	37.885	ENSCGRG00001023588	Zfp408	51	37.885
ENSCGRG00001007163	-	98	35.638	ENSCGRG00001017330	Repin1	95	35.638
ENSCGRG00001007163	-	98	49.438	ENSCGRG00001005125	Wt1	74	49.438
ENSCGRG00001007163	-	82	46.914	ENSCGRG00001013279	Zfp784	66	46.914
ENSCGRG00001007163	-	82	31.412	ENSCGRG00001001429	Zfp574	92	35.354
ENSCGRG00001007163	-	81	30.159	ENSCGRG00001004071	Patz1	54	31.373
ENSCGRG00001007163	-	99	43.885	ENSCGRG00001018100	Zfp202	64	43.885
ENSCGRG00001007163	-	99	54.338	ENSCGRG00001010967	Zfp1	99	54.338
ENSCGRG00001007163	-	100	49.198	ENSCGRG00001024303	-	98	49.855
ENSCGRG00001007163	-	99	32.251	ENSCGRG00001009557	Zfp319	87	37.690
ENSCGRG00001007163	-	92	41.549	ENSCGRG00001012398	Zfp236	81	43.089
ENSCGRG00001007163	-	99	49.597	ENSCGRG00001021088	Zfp354a	98	49.597
ENSCGRG00001007163	-	99	60.526	ENSCGRG00001023858	Zfp560	90	44.652
ENSCGRG00001007163	-	99	44.386	ENSCGRG00001000576	Zfp26	89	46.502
ENSCGRG00001007163	-	86	47.031	ENSCGRG00001015424	-	79	47.031
ENSCGRG00001007163	-	99	48.734	ENSCGRG00001007115	-	99	48.734
ENSCGRG00001007163	-	79	36.296	ENSCGRG00001011389	Snai3	64	36.296
ENSCGRG00001007163	-	82	50.000	ENSCGRG00001017579	Zfp112	74	50.000
ENSCGRG00001007163	-	81	48.375	ENSCGRG00001013561	Zfp768	64	48.214
ENSCGRG00001007163	-	100	51.379	ENSCGRG00001002406	Zfp39	92	49.856
ENSCGRG00001007163	-	99	46.457	ENSCGRG00001002297	-	100	48.446
ENSCGRG00001007163	-	99	53.741	ENSCGRG00001006591	Zkscan3	59	48.899
ENSCGRG00001007163	-	99	57.500	ENSCGRG00001011966	Zfp715	70	54.545
ENSCGRG00001007163	-	86	54.622	ENSCGRG00001019143	-	88	54.622
ENSCGRG00001007163	-	90	54.071	ENSCGRG00001012523	-	98	54.071
ENSCGRG00001007163	-	100	41.111	ENSCGRG00001001639	Zfp882	99	41.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001007163	-	82	54.040	ENSCING00000018801	zf(c2h2)-138	90	54.040	Ciona_intestinalis
ENSCGRG00001007163	-	82	56.306	ENSCING00000003470	-	94	56.306	Ciona_intestinalis
ENSCGRG00001007163	-	82	50.357	ENSCSAVG00000010156	-	92	50.357	Ciona_savignyi
ENSCGRG00001007163	-	100	100.000	ENSCGRG00000000778	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001007163	-	100	50.746	ENSCGRG00000018332	Zfp53	93	51.289	Cricetulus_griseus_crigri
ENSCGRG00001007163	-	92	43.836	ENSEBUG00000001525	-	86	47.347	Eptatretus_burgeri
ENSCGRG00001007163	-	92	50.529	ENSEBUG00000016878	-	86	50.529	Eptatretus_burgeri
ENSCGRG00001007163	-	83	51.134	ENSEBUG00000012823	-	79	50.000	Eptatretus_burgeri
ENSCGRG00001007163	-	94	48.397	ENSEBUG00000005655	-	87	48.397	Eptatretus_burgeri
ENSCGRG00001007163	-	91	44.836	ENSEBUG00000012454	-	91	44.836	Eptatretus_burgeri
ENSCGRG00001007163	-	94	44.444	ENSEBUG00000008792	-	99	42.286	Eptatretus_burgeri
ENSCGRG00001007163	-	100	51.818	ENSMAUG00000005974	-	98	53.704	Mesocricetus_auratus
ENSCGRG00001007163	-	99	52.381	ENSMAUG00000004844	-	97	52.381	Mesocricetus_auratus
ENSCGRG00001007163	-	100	58.629	ENSMAUG00000000939	-	95	54.688	Mesocricetus_auratus
ENSCGRG00001007163	-	99	54.974	ENSMOCG00000007851	-	99	54.974	Microtus_ochrogaster
ENSCGRG00001007163	-	100	50.785	ENSMOCG00000006946	Zfp53	97	51.420	Microtus_ochrogaster
ENSCGRG00001007163	-	100	46.411	MGP_CAROLIEiJ_G0021132	Zfp948	97	54.327	Mus_caroli
ENSCGRG00001007163	-	100	55.936	ENSMUSG00000062743	Zfp677	98	55.936	Mus_musculus
ENSCGRG00001007163	-	85	48.649	ENSPSIG00000009270	-	72	48.689	Pelodiscus_sinensis
ENSCGRG00001007163	-	99	54.878	ENSPEMG00000007241	-	98	55.488	Peromyscus_maniculatus_bairdii
ENSCGRG00001007163	-	99	54.000	ENSPEMG00000023883	-	98	54.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001007163	-	100	55.835	ENSRNOG00000052406	LOC102552527	98	55.835	Rattus_norvegicus