EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001007357 (Gene tree)
Gene ID: -
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 72249 bases
Position: chrscaffold_5:16305673-16377921
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001005585	eIF2A	PF08662.11	8.3e-11	1	1
ENSCGRP00001005580	eIF2A	PF08662.11	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001008612	-	1674	-	ENSCGRP00001005580	405 (aa)	-	-
ENSCGRT00001008621	-	1071	-	ENSCGRP00001005585	356 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001007357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001007357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001007357	Poc1a	80	30.102	ENSCGRG00001002699	Prpf19	56	30.102
ENSCGRG00001007357	Poc1a	83	33.333	ENSCGRG00001013271	Wdr5b	91	33.977
ENSCGRG00001007357	Poc1a	82	30.625	ENSCGRG00001016992	Prpf4	56	30.625
ENSCGRG00001007357	Poc1a	81	30.159	ENSCGRG00001015563	Wdr61	97	30.159
ENSCGRG00001007357	Poc1a	86	31.897	ENSCGRG00001019544	Wdr3	56	31.897
ENSCGRG00001007357	Poc1a	86	35.354	ENSCGRG00001016622	Ciao1	86	35.354
ENSCGRG00001007357	Poc1a	83	31.902	ENSCGRG00001019923	Apaf1	51	33.129
ENSCGRG00001007357	Poc1a	83	30.233	ENSCGRG00001019447	Wdr5	92	30.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001007357	Poc1a	99	91.643	ENSG00000164087	POC1A	100	91.643	Homo_sapiens
ENSCGRG00001007357	Poc1a	96	74.333	ENSAPOG00000002677	POC1A	97	69.620	Acanthochromis_polyacanthus
ENSCGRG00001007357	Poc1a	98	91.250	ENSAMEG00000009136	POC1A	97	91.250	Ailuropoda_melanoleuca
ENSCGRG00001007357	Poc1a	88	75.719	ENSACIG00000018288	poc1a	96	63.765	Amphilophus_citrinellus
ENSCGRG00001007357	Poc1a	98	84.615	ENSAOCG00000001066	POC1A	97	71.144	Amphiprion_ocellaris
ENSCGRG00001007357	Poc1a	97	75.291	ENSAPEG00000005795	poc1a	96	75.291	Amphiprion_percula
ENSCGRG00001007357	Poc1a	98	78.500	ENSAPLG00000007756	POC1A	99	78.500	Anas_platyrhynchos
ENSCGRG00001007357	Poc1a	99	89.630	ENSANAG00000030897	POC1A	99	89.630	Aotus_nancymaae
ENSCGRG00001007357	Poc1a	99	71.011	ENSACLG00000017869	POC1A	98	74.233	Astatotilapia_calliptera
ENSCGRG00001007357	Poc1a	97	71.261	ENSAMXG00000024703	poc1a	93	71.261	Astyanax_mexicanus
ENSCGRG00001007357	Poc1a	97	89.757	ENSBTAG00000001471	POC1A	99	89.646	Bos_taurus
ENSCGRG00001007357	Poc1a	99	91.317	ENSCJAG00000005972	POC1A	99	91.317	Callithrix_jacchus
ENSCGRG00001007357	Poc1a	99	85.644	ENSCAFG00020022379	POC1A	99	85.644	Canis_lupus_dingo
ENSCGRG00001007357	Poc1a	99	90.370	ENSCHIG00000002571	POC1A	99	90.370	Capra_hircus
ENSCGRG00001007357	Poc1a	98	93.182	ENSTSYG00000008302	POC1A	98	93.182	Carlito_syrichta
ENSCGRG00001007357	Poc1a	83	94.796	ENSCAPG00000016201	POC1A	89	80.381	Cavia_aperea
ENSCGRG00001007357	Poc1a	99	90.503	ENSCPOG00000006740	POC1A	100	90.503	Cavia_porcellus
ENSCGRG00001007357	Poc1a	99	90.123	ENSCCAG00000023380	POC1A	99	90.123	Cebus_capucinus
ENSCGRG00001007357	Poc1a	99	89.109	ENSCATG00000021822	POC1A	99	89.109	Cercocebus_atys
ENSCGRG00001007357	Poc1a	100	85.475	ENSCLAG00000010593	POC1A	100	85.475	Chinchilla_lanigera
ENSCGRG00001007357	Poc1a	97	89.617	ENSCSAG00000013862	POC1A	99	89.617	Chlorocebus_sabaeus
ENSCGRG00001007357	Poc1a	79	86.397	ENSCPBG00000016728	POC1A	98	86.397	Chrysemys_picta_bellii
ENSCGRG00001007357	Poc1a	96	68.389	ENSCSAVG00000008477	-	99	68.389	Ciona_savignyi
ENSCGRG00001007357	Poc1a	99	91.011	ENSCANG00000033064	POC1A	99	91.011	Colobus_angolensis_palliatus
ENSCGRG00001007357	Poc1a	96	67.949	ENSCSEG00000010287	POC1A	93	67.949	Cynoglossus_semilaevis
ENSCGRG00001007357	Poc1a	97	66.339	ENSCVAG00000015594	POC1A	95	66.339	Cyprinodon_variegatus
ENSCGRG00001007357	Poc1a	76	60.000	ENSEBUG00000008246	POC1A	55	60.000	Eptatretus_burgeri
ENSCGRG00001007357	Poc1a	87	67.308	ENSEBUG00000002614	POC1A	93	67.308	Eptatretus_burgeri
ENSCGRG00001007357	Poc1a	81	61.672	ENSEBUG00000008013	poc1a	83	61.672	Eptatretus_burgeri
ENSCGRG00001007357	Poc1a	97	67.506	ENSELUG00000015504	poc1a	97	68.170	Esox_lucius
ENSCGRG00001007357	Poc1a	99	93.838	ENSFCAG00000015704	POC1A	99	93.838	Felis_catus
ENSCGRG00001007357	Poc1a	99	75.123	ENSFALG00000008922	POC1A	99	75.123	Ficedula_albicollis
ENSCGRG00001007357	Poc1a	97	92.550	ENSFDAG00000011606	POC1A	97	92.550	Fukomys_damarensis
ENSCGRG00001007357	Poc1a	97	67.663	ENSFHEG00000015504	POC1A	96	73.585	Fundulus_heteroclitus
ENSCGRG00001007357	Poc1a	99	79.037	ENSGALG00000034572	-	98	79.037	Gallus_gallus
ENSCGRG00001007357	Poc1a	97	69.674	ENSGACG00000007015	poc1a	96	69.674	Gasterosteus_aculeatus
ENSCGRG00001007357	Poc1a	99	77.667	ENSGAGG00000014637	POC1A	99	77.667	Gopherus_agassizii
ENSCGRG00001007357	Poc1a	99	91.365	ENSGGOG00000006652	POC1A	100	91.365	Gorilla_gorilla
ENSCGRG00001007357	Poc1a	99	91.341	ENSHGLG00000013436	POC1A	100	91.341	Heterocephalus_glaber_female
ENSCGRG00001007357	Poc1a	99	90.099	ENSHGLG00100003479	POC1A	99	90.955	Heterocephalus_glaber_male
ENSCGRG00001007357	Poc1a	97	67.939	ENSIPUG00000001227	POC1A	95	67.939	Ictalurus_punctatus
ENSCGRG00001007357	Poc1a	99	91.620	ENSSTOG00000002638	POC1A	100	91.620	Ictidomys_tridecemlineatus
ENSCGRG00001007357	Poc1a	99	93.258	ENSJJAG00000018739	Poc1a	99	93.258	Jaculus_jaculus
ENSCGRG00001007357	Poc1a	93	72.222	ENSLBEG00000016119	POC1A	97	72.222	Labrus_bergylta
ENSCGRG00001007357	Poc1a	99	68.445	ENSLACG00000018788	POC1A	92	77.603	Latimeria_chalumnae
ENSCGRG00001007357	Poc1a	97	71.852	ENSLOCG00000013801	poc1a	96	71.852	Lepisosteus_oculatus
ENSCGRG00001007357	Poc1a	98	81.407	ENSLAFG00000028434	POC1A	99	87.333	Loxodonta_africana
ENSCGRG00001007357	Poc1a	90	89.344	ENSMFAG00000001970	POC1A	99	89.344	Macaca_fascicularis
ENSCGRG00001007357	Poc1a	99	89.109	ENSMMUG00000012485	POC1A	99	89.109	Macaca_mulatta
ENSCGRG00001007357	Poc1a	90	89.071	ENSMNEG00000042811	POC1A	99	89.071	Macaca_nemestrina
ENSCGRG00001007357	Poc1a	99	90.529	ENSMLEG00000039574	POC1A	100	90.529	Mandrillus_leucophaeus
ENSCGRG00001007357	Poc1a	95	76.678	ENSMAMG00000014233	POC1A	98	76.678	Mastacembelus_armatus
ENSCGRG00001007357	Poc1a	90	75.000	ENSMZEG00005013503	POC1A	98	74.233	Maylandia_zebra
ENSCGRG00001007357	Poc1a	87	82.581	ENSMGAG00000001628	POC1A	98	69.161	Meleagris_gallopavo
ENSCGRG00001007357	Poc1a	100	97.191	ENSMAUG00000017403	Poc1a	100	97.191	Mesocricetus_auratus
ENSCGRG00001007357	Poc1a	99	92.437	ENSMICG00000002709	POC1A	99	92.437	Microcebus_murinus
ENSCGRG00001007357	Poc1a	92	94.638	ENSMOCG00000003396	Poc1a	100	94.638	Microtus_ochrogaster
ENSCGRG00001007357	Poc1a	98	65.152	ENSMMOG00000010427	poc1a	94	65.152	Mola_mola
ENSCGRG00001007357	Poc1a	87	85.256	ENSMODG00000011717	POC1A	96	79.404	Monodelphis_domestica
ENSCGRG00001007357	Poc1a	98	72.145	ENSMALG00000009054	poc1a	95	72.145	Monopterus_albus
ENSCGRG00001007357	Poc1a	99	93.521	MGP_CAROLIEiJ_G0032617	Poc1a	99	93.521	Mus_caroli
ENSCGRG00001007357	Poc1a	99	93.239	ENSMUSG00000023345	Poc1a	99	93.239	Mus_musculus
ENSCGRG00001007357	Poc1a	99	93.239	MGP_PahariEiJ_G0015485	Poc1a	99	93.239	Mus_pahari
ENSCGRG00001007357	Poc1a	99	92.958	MGP_SPRETEiJ_G0033763	Poc1a	99	92.958	Mus_spretus
ENSCGRG00001007357	Poc1a	99	90.887	ENSMPUG00000011723	POC1A	99	90.887	Mustela_putorius_furo
ENSCGRG00001007357	Poc1a	98	90.000	ENSMLUG00000015092	POC1A	91	90.000	Myotis_lucifugus
ENSCGRG00001007357	Poc1a	99	92.079	ENSNGAG00000005212	Poc1a	99	92.079	Nannospalax_galili
ENSCGRG00001007357	Poc1a	87	75.806	ENSNBRG00000022135	poc1a	98	65.693	Neolamprologus_brichardi
ENSCGRG00001007357	Poc1a	99	90.808	ENSNLEG00000007084	POC1A	100	90.808	Nomascus_leucogenys
ENSCGRG00001007357	Poc1a	91	96.429	ENSMEUG00000007715	-	79	96.429	Notamacropus_eugenii
ENSCGRG00001007357	Poc1a	97	87.838	ENSOPRG00000008831	POC1A	91	87.838	Ochotona_princeps
ENSCGRG00001007357	Poc1a	98	88.750	ENSODEG00000018290	POC1A	99	88.750	Octodon_degus
ENSCGRG00001007357	Poc1a	98	73.750	ENSONIG00000014378	POC1A	98	57.759	Oreochromis_niloticus
ENSCGRG00001007357	Poc1a	97	89.646	ENSOCUG00000002080	POC1A	99	89.646	Oryctolagus_cuniculus
ENSCGRG00001007357	Poc1a	90	71.818	ENSOMEG00000019834	POC1A	97	60.349	Oryzias_melastigma
ENSCGRG00001007357	Poc1a	91	92.638	ENSOGAG00000032245	POC1A	99	84.108	Otolemur_garnettii
ENSCGRG00001007357	Poc1a	99	90.370	ENSOARG00000006352	POC1A	99	90.370	Ovis_aries
ENSCGRG00001007357	Poc1a	99	91.643	ENSPPAG00000043583	POC1A	100	91.643	Pan_paniscus
ENSCGRG00001007357	Poc1a	99	93.838	ENSPPRG00000003365	POC1A	99	93.838	Panthera_pardus
ENSCGRG00001007357	Poc1a	97	92.098	ENSPTIG00000005388	POC1A	99	92.098	Panthera_tigris_altaica
ENSCGRG00001007357	Poc1a	99	91.643	ENSPTRG00000014989	POC1A	100	91.643	Pan_troglodytes
ENSCGRG00001007357	Poc1a	86	85.390	ENSPSIG00000014809	POC1A	88	85.437	Pelodiscus_sinensis
ENSCGRG00001007357	Poc1a	96	70.951	ENSPMGG00000005356	poc1a	95	70.951	Periophthalmus_magnuspinnatus
ENSCGRG00001007357	Poc1a	91	95.077	ENSPEMG00000024131	Poc1a	100	95.077	Peromyscus_maniculatus_bairdii
ENSCGRG00001007357	Poc1a	90	74.455	ENSPMAG00000000333	poc1a	80	74.455	Petromyzon_marinus
ENSCGRG00001007357	Poc1a	99	78.856	ENSPCIG00000018160	POC1A	99	78.856	Phascolarctos_cinereus
ENSCGRG00001007357	Poc1a	99	90.099	ENSPPYG00000013816	POC1A	99	90.099	Pongo_abelii
ENSCGRG00001007357	Poc1a	99	86.386	ENSPCAG00000002118	POC1A	99	86.386	Procavia_capensis
ENSCGRG00001007357	Poc1a	99	93.277	ENSPCOG00000012625	POC1A	99	93.277	Propithecus_coquereli
ENSCGRG00001007357	Poc1a	99	71.535	ENSPVAG00000012480	POC1A	100	71.253	Pteropus_vampyrus
ENSCGRG00001007357	Poc1a	98	70.250	ENSPNYG00000019517	poc1a	98	70.250	Pundamilia_nyererei
ENSCGRG00001007357	Poc1a	85	80.858	ENSPNAG00000007556	POC1A	96	80.858	Pygocentrus_nattereri
ENSCGRG00001007357	Poc1a	97	89.101	ENSRNOG00000037295	Poc1a	99	89.101	Rattus_norvegicus
ENSCGRG00001007357	Poc1a	99	90.808	ENSRBIG00000031748	POC1A	100	90.808	Rhinopithecus_bieti
ENSCGRG00001007357	Poc1a	99	90.808	ENSRROG00000044472	POC1A	100	90.808	Rhinopithecus_roxellana
ENSCGRG00001007357	Poc1a	99	90.083	ENSSBOG00000027902	POC1A	99	91.008	Saimiri_boliviensis_boliviensis
ENSCGRG00001007357	Poc1a	98	75.719	ENSSMAG00000013505	POC1A	97	71.765	Scophthalmus_maximus
ENSCGRG00001007357	Poc1a	98	72.566	ENSSDUG00000016161	POC1A	98	72.566	Seriola_dumerili
ENSCGRG00001007357	Poc1a	99	75.676	ENSSLDG00000003828	POC1A	98	76.358	Seriola_lalandi_dorsalis
ENSCGRG00001007357	Poc1a	96	82.143	ENSSPUG00000008656	POC1A	99	73.620	Sphenodon_punctatus
ENSCGRG00001007357	Poc1a	97	59.459	ENSSPAG00000020330	POC1A	93	59.459	Stegastes_partitus
ENSCGRG00001007357	Poc1a	99	89.136	ENSSSCG00000011426	POC1A	99	89.136	Sus_scrofa
ENSCGRG00001007357	Poc1a	98	75.628	ENSTGUG00000006036	POC1A	99	75.628	Taeniopygia_guttata
ENSCGRG00001007357	Poc1a	96	63.866	ENSTRUG00000007900	POC1A	96	63.866	Takifugu_rubripes
ENSCGRG00001007357	Poc1a	98	64.286	ENSTNIG00000014818	POC1A	97	56.000	Tetraodon_nigroviridis
ENSCGRG00001007357	Poc1a	99	87.192	ENSTTRG00000016798	POC1A	99	87.192	Tursiops_truncatus
ENSCGRG00001007357	Poc1a	98	91.500	ENSUAMG00000020816	POC1A	99	91.500	Ursus_americanus
ENSCGRG00001007357	Poc1a	97	91.033	ENSUMAG00000021482	POC1A	99	91.033	Ursus_maritimus
ENSCGRG00001007357	Poc1a	98	64.789	ENSXETG00000010813	poc1a	97	64.789	Xenopus_tropicalis