EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001008057 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 156 bases
Position: chrscaffold_6:56913709-56913864
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006034	Ribosomal_L39	PF00832.20	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001009394	-	141	-	ENSCGRP00001006034	46 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001008057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001008057's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001008057	-	98	82.000	ENSCGRG00001012111	-	98	82.000
ENSCGRG00001008057	-	100	86.275	ENSCGRG00001021449	-	100	86.275
ENSCGRG00001008057	-	100	82.353	ENSCGRG00001012052	-	100	82.353
ENSCGRG00001008057	-	100	80.392	ENSCGRG00001006227	-	100	80.392
ENSCGRG00001008057	-	100	78.431	ENSCGRG00001007508	-	100	78.431
ENSCGRG00001008057	-	100	82.353	ENSCGRG00001003230	Rpl39l	100	82.353
ENSCGRG00001008057	-	100	88.235	ENSCGRG00001008304	-	100	88.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001008057	-	100	86.275	ENSAMEG00000019848	-	100	86.275	Ailuropoda_melanoleuca
ENSCGRG00001008057	-	100	84.314	ENSANAG00000016046	-	100	84.314	Aotus_nancymaae
ENSCGRG00001008057	-	100	80.392	ENSANAG00000016436	-	100	80.392	Aotus_nancymaae
ENSCGRG00001008057	-	100	86.275	ENSANAG00000031418	-	100	86.275	Aotus_nancymaae
ENSCGRG00001008057	-	100	82.353	ENSCAFG00020023883	-	100	82.353	Canis_lupus_dingo
ENSCGRG00001008057	-	100	84.314	ENSCAFG00020009904	-	100	84.314	Canis_lupus_dingo
ENSCGRG00001008057	-	100	84.314	ENSCAFG00020026664	-	100	84.314	Canis_lupus_dingo
ENSCGRG00001008057	-	100	82.353	ENSCAFG00020002578	-	100	82.353	Canis_lupus_dingo
ENSCGRG00001008057	-	100	78.431	ENSCAFG00020027515	-	100	78.431	Canis_lupus_dingo
ENSCGRG00001008057	-	100	86.275	ENSTSYG00000026785	-	100	86.275	Carlito_syrichta
ENSCGRG00001008057	-	89	76.087	ENSTSYG00000026787	-	82	76.087	Carlito_syrichta
ENSCGRG00001008057	-	100	86.275	ENSCAPG00000007210	-	100	86.275	Cavia_aperea
ENSCGRG00001008057	-	100	86.275	ENSCPOG00000036636	-	100	86.275	Cavia_porcellus
ENSCGRG00001008057	-	100	84.314	ENSCLAG00000017874	-	100	84.314	Chinchilla_lanigera
ENSCGRG00001008057	-	100	80.392	ENSCLAG00000017707	-	100	80.392	Chinchilla_lanigera
ENSCGRG00001008057	-	100	82.353	ENSCGRG00000018615	Rpl39l	100	82.353	Cricetulus_griseus_crigri
ENSCGRG00001008057	-	100	82.353	ENSCGRG00000019654	-	100	82.353	Cricetulus_griseus_crigri
ENSCGRG00001008057	-	100	84.314	ENSDORG00000028485	-	100	84.314	Dipodomys_ordii
ENSCGRG00001008057	-	100	84.314	ENSDORG00000027732	-	100	84.314	Dipodomys_ordii
ENSCGRG00001008057	-	100	63.462	ENSFCAG00000038709	-	91	63.462	Felis_catus
ENSCGRG00001008057	-	100	68.627	ENSFCAG00000044333	RPL39L	100	68.627	Felis_catus
ENSCGRG00001008057	-	100	82.353	ENSFDAG00000021400	-	100	82.353	Fukomys_damarensis
ENSCGRG00001008057	-	91	78.723	ENSGGOG00000040312	-	65	78.723	Gorilla_gorilla
ENSCGRG00001008057	-	100	78.431	ENSGGOG00000036596	-	100	78.431	Gorilla_gorilla
ENSCGRG00001008057	-	100	82.353	ENSHGLG00000020604	-	100	82.353	Heterocephalus_glaber_female
ENSCGRG00001008057	-	100	82.353	ENSHGLG00100011216	-	100	82.353	Heterocephalus_glaber_male
ENSCGRG00001008057	-	100	84.314	ENSSTOG00000028051	-	100	84.314	Ictidomys_tridecemlineatus
ENSCGRG00001008057	-	100	86.275	ENSSTOG00000030492	-	100	86.275	Ictidomys_tridecemlineatus
ENSCGRG00001008057	-	100	78.431	ENSJJAG00000010041	-	100	78.431	Jaculus_jaculus
ENSCGRG00001008057	-	100	86.275	ENSLAFG00000028648	-	100	86.275	Loxodonta_africana
ENSCGRG00001008057	-	100	84.314	ENSMFAG00000020492	-	100	84.314	Macaca_fascicularis
ENSCGRG00001008057	-	100	82.353	ENSMMUG00000038479	-	100	82.353	Macaca_mulatta
ENSCGRG00001008057	-	100	84.314	ENSMMUG00000045452	-	100	84.314	Macaca_mulatta
ENSCGRG00001008057	-	100	86.275	ENSMMUG00000044527	-	100	86.275	Macaca_mulatta
ENSCGRG00001008057	-	100	80.392	ENSMNEG00000001683	-	68	80.392	Macaca_nemestrina
ENSCGRG00001008057	-	100	84.314	ENSMNEG00000000126	-	100	84.314	Macaca_nemestrina
ENSCGRG00001008057	-	100	86.275	ENSMLEG00000003517	-	100	86.275	Mandrillus_leucophaeus
ENSCGRG00001008057	-	100	80.392	ENSMLEG00000009433	-	100	80.392	Mandrillus_leucophaeus
ENSCGRG00001008057	-	100	84.314	ENSMLEG00000018088	-	100	84.314	Mandrillus_leucophaeus
ENSCGRG00001008057	-	98	84.000	ENSMLEG00000000739	-	100	84.000	Mandrillus_leucophaeus
ENSCGRG00001008057	-	100	82.353	ENSMAUG00000015776	Rpl39l	100	82.353	Mesocricetus_auratus
ENSCGRG00001008057	-	100	80.392	ENSMAUG00000002516	-	100	80.392	Mesocricetus_auratus
ENSCGRG00001008057	-	100	80.392	ENSMOCG00000001545	Rpl39l	100	80.392	Microtus_ochrogaster
ENSCGRG00001008057	-	100	86.275	ENSMOCG00000002138	-	100	86.275	Microtus_ochrogaster
ENSCGRG00001008057	-	100	84.314	MGP_CAROLIEiJ_G0020438	Rpl39l	100	84.314	Mus_caroli
ENSCGRG00001008057	-	100	84.314	ENSMUSG00000039209	Rpl39l	100	84.314	Mus_musculus
ENSCGRG00001008057	-	100	84.314	MGP_SPRETEiJ_G0021332	Rpl39l	100	84.314	Mus_spretus
ENSCGRG00001008057	-	100	80.392	ENSMLUG00000015029	-	100	80.392	Myotis_lucifugus
ENSCGRG00001008057	-	100	88.000	ENSMLUG00000025012	-	100	88.000	Myotis_lucifugus
ENSCGRG00001008057	-	100	82.353	ENSNGAG00000012570	Rpl39l	100	82.353	Nannospalax_galili
ENSCGRG00001008057	-	89	76.087	ENSNGAG00000022494	-	96	76.087	Nannospalax_galili
ENSCGRG00001008057	-	100	78.431	ENSNGAG00000008665	-	100	78.431	Nannospalax_galili
ENSCGRG00001008057	-	100	84.314	ENSODEG00000020114	-	100	84.314	Octodon_degus
ENSCGRG00001008057	-	100	82.353	ENSOGAG00000024799	-	100	82.353	Otolemur_garnettii
ENSCGRG00001008057	-	100	76.471	ENSPPRG00000020779	-	100	76.471	Panthera_pardus
ENSCGRG00001008057	-	100	78.431	ENSPTIG00000006209	-	100	78.431	Panthera_tigris_altaica
ENSCGRG00001008057	-	98	84.000	ENSPANG00000030226	-	100	84.000	Papio_anubis
ENSCGRG00001008057	-	100	84.314	ENSRNOG00000032300	Rpl39l	100	84.314	Rattus_norvegicus
ENSCGRG00001008057	-	100	84.314	ENSRBIG00000010842	-	100	84.314	Rhinopithecus_bieti
ENSCGRG00001008057	-	100	84.314	ENSRROG00000037724	-	100	84.314	Rhinopithecus_roxellana
ENSCGRG00001008057	-	100	84.314	ENSRROG00000023025	-	100	84.314	Rhinopithecus_roxellana
ENSCGRG00001008057	-	100	74.510	ENSSSCG00000033224	-	100	74.510	Sus_scrofa
ENSCGRG00001008057	-	100	82.353	ENSSSCG00000038385	-	69	82.353	Sus_scrofa
ENSCGRG00001008057	-	89	78.261	ENSUAMG00000000067	-	98	78.261	Ursus_americanus
ENSCGRG00001008057	-	100	86.275	ENSUAMG00000020990	-	100	86.275	Ursus_americanus
ENSCGRG00001008057	-	100	86.275	ENSUMAG00000015280	-	100	86.275	Ursus_maritimus
ENSCGRG00001008057	-	100	76.471	ENSVVUG00000014095	-	100	76.471	Vulpes_vulpes
ENSCGRG00001008057	-	100	86.275	ENSVVUG00000030147	-	100	86.275	Vulpes_vulpes
ENSCGRG00001008057	-	98	82.000	ENSVVUG00000022951	-	100	82.000	Vulpes_vulpes