EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001008710 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 6239 bases
Position: chrscaffold_23:33527357-33533595
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006449	RRM_1	PF00076.22	6.3e-30	1	3
ENSCGRP00001006449	RRM_1	PF00076.22	6.3e-30	2	3
ENSCGRP00001006449	RRM_1	PF00076.22	6.3e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001010128	-	3563	-	ENSCGRP00001006449	867 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001008710's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001008710's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001008710	-	65	71.264	ENSCGRG00001021144	Rbm12	51	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001008710	-	97	76.531	ENSG00000183808	RBM12B	100	96.341	Homo_sapiens
ENSCGRG00001008710	-	65	49.351	ENSAPOG00000013963	rbm12b	86	49.351	Acanthochromis_polyacanthus
ENSCGRG00001008710	-	97	78.180	ENSAMEG00000007134	RBM12B	100	78.180	Ailuropoda_melanoleuca
ENSCGRG00001008710	-	56	38.462	ENSACIG00000014943	rbm12b	99	39.077	Amphilophus_citrinellus
ENSCGRG00001008710	-	65	50.649	ENSAOCG00000024270	rbm12b	86	50.649	Amphiprion_ocellaris
ENSCGRG00001008710	-	63	47.761	ENSAPEG00000022079	rbm12b	98	37.838	Amphiprion_percula
ENSCGRG00001008710	-	65	46.753	ENSATEG00000004578	rbm12b	85	46.753	Anabas_testudineus
ENSCGRG00001008710	-	82	57.432	ENSAPLG00000002020	RBM12B	100	57.432	Anas_platyrhynchos
ENSCGRG00001008710	-	76	44.253	ENSACAG00000003463	RBM12B	67	44.253	Anolis_carolinensis
ENSCGRG00001008710	-	97	76.285	ENSANAG00000034015	RBM12B	100	76.285	Aotus_nancymaae
ENSCGRG00001008710	-	66	48.052	ENSACLG00000005575	rbm12b	86	48.052	Astatotilapia_calliptera
ENSCGRG00001008710	-	62	48.052	ENSACLG00000005578	rbm12b	82	48.052	Astatotilapia_calliptera
ENSCGRG00001008710	-	65	45.455	ENSAMXG00000041973	rbm12b	87	45.455	Astyanax_mexicanus
ENSCGRG00001008710	-	97	75.922	ENSBTAG00000013408	RBM12B	100	75.922	Bos_taurus
ENSCGRG00001008710	-	97	73.656	ENSCAFG00000009109	RBM12B	100	74.422	Canis_familiaris
ENSCGRG00001008710	-	97	75.771	ENSCAFG00020012203	RBM12B	100	75.657	Canis_lupus_dingo
ENSCGRG00001008710	-	74	77.932	ENSCHIG00000006790	RBM12B	88	77.932	Capra_hircus
ENSCGRG00001008710	-	97	68.864	ENSTSYG00000012515	RBM12B	100	73.254	Carlito_syrichta
ENSCGRG00001008710	-	97	70.724	ENSCAPG00000003543	RBM12B	100	69.255	Cavia_aperea
ENSCGRG00001008710	-	97	70.724	ENSCPOG00000007815	RBM12B	100	69.255	Cavia_porcellus
ENSCGRG00001008710	-	97	75.487	ENSCATG00000030769	RBM12B	100	75.487	Cercocebus_atys
ENSCGRG00001008710	-	97	71.668	ENSCLAG00000017617	RBM12B	100	69.675	Chinchilla_lanigera
ENSCGRG00001008710	-	97	66.966	ENSCSAG00000018559	RBM12B	100	73.620	Chlorocebus_sabaeus
ENSCGRG00001008710	-	95	68.388	ENSCHOG00000008934	RBM12B	100	72.690	Choloepus_hoffmanni
ENSCGRG00001008710	-	82	57.042	ENSCPBG00000003061	RBM12B	100	57.042	Chrysemys_picta_bellii
ENSCGRG00001008710	-	97	74.943	ENSCANG00000030379	RBM12B	100	74.943	Colobus_angolensis_palliatus
ENSCGRG00001008710	-	66	49.351	ENSCSEG00000004610	rbm12b	82	49.351	Cynoglossus_semilaevis
ENSCGRG00001008710	-	65	49.351	ENSCVAG00000011047	rbm12b	86	49.351	Cyprinodon_variegatus
ENSCGRG00001008710	-	56	34.335	ENSCVAG00000009259	-	99	33.766	Cyprinodon_variegatus
ENSCGRG00001008710	-	71	38.076	ENSDARG00000079717	rbm12b	90	39.761	Danio_rerio
ENSCGRG00001008710	-	97	71.144	ENSDNOG00000041608	RBM12B	100	72.520	Dasypus_novemcinctus
ENSCGRG00001008710	-	97	69.904	ENSDORG00000024034	-	100	67.983	Dipodomys_ordii
ENSCGRG00001008710	-	69	67.157	ENSETEG00000013005	-	84	65.994	Echinops_telfairi
ENSCGRG00001008710	-	52	31.729	ENSEBUG00000009015	-	71	31.291	Eptatretus_burgeri
ENSCGRG00001008710	-	97	77.283	ENSEASG00005016297	RBM12B	100	77.283	Equus_asinus_asinus
ENSCGRG00001008710	-	97	68.884	ENSECAG00000017870	RBM12B	100	74.150	Equus_caballus
ENSCGRG00001008710	-	53	33.077	ENSELUG00000009039	zgc:153215	84	32.780	Esox_lucius
ENSCGRG00001008710	-	97	77.520	ENSFCAG00000029274	RBM12B	100	77.252	Felis_catus
ENSCGRG00001008710	-	81	56.835	ENSFALG00000014893	RBM12B	100	56.835	Ficedula_albicollis
ENSCGRG00001008710	-	99	71.914	ENSFDAG00000005576	RBM12B	99	70.782	Fukomys_damarensis
ENSCGRG00001008710	-	55	30.818	ENSFHEG00000014539	zgc:153215	96	30.126	Fundulus_heteroclitus
ENSCGRG00001008710	-	65	49.351	ENSFHEG00000016425	rbm12b	86	49.351	Fundulus_heteroclitus
ENSCGRG00001008710	-	71	46.667	ENSGMOG00000013467	rbm12b	92	46.667	Gadus_morhua
ENSCGRG00001008710	-	82	58.219	ENSGALG00000035129	RBM12B	100	58.219	Gallus_gallus
ENSCGRG00001008710	-	65	49.351	ENSGAFG00000007224	rbm12b	86	49.351	Gambusia_affinis
ENSCGRG00001008710	-	65	48.052	ENSGACG00000008682	rbm12b	85	48.052	Gasterosteus_aculeatus
ENSCGRG00001008710	-	82	57.447	ENSGAGG00000009774	RBM12B	100	57.447	Gopherus_agassizii
ENSCGRG00001008710	-	97	77.283	ENSGGOG00000011909	RBM12B	100	77.283	Gorilla_gorilla
ENSCGRG00001008710	-	65	48.052	ENSHBUG00000016227	rbm12b	84	48.052	Haplochromis_burtoni
ENSCGRG00001008710	-	97	70.894	ENSHGLG00000009063	RBM12B	100	69.854	Heterocephalus_glaber_female
ENSCGRG00001008710	-	97	70.894	ENSHGLG00100021324	RBM12B	100	69.854	Heterocephalus_glaber_male
ENSCGRG00001008710	-	70	40.000	ENSHCOG00000014952	rbm12b	97	40.000	Hippocampus_comes
ENSCGRG00001008710	-	67	49.438	ENSIPUG00000001167	RBM12B	85	49.438	Ictalurus_punctatus
ENSCGRG00001008710	-	97	79.439	ENSSTOG00000027445	RBM12B	100	79.439	Ictidomys_tridecemlineatus
ENSCGRG00001008710	-	97	73.893	ENSJJAG00000004165	-	100	73.553	Jaculus_jaculus
ENSCGRG00001008710	-	65	50.000	ENSKMAG00000013715	rbm12b	86	50.000	Kryptolebias_marmoratus
ENSCGRG00001008710	-	67	50.000	ENSKMAG00000013704	rbm12b	85	50.000	Kryptolebias_marmoratus
ENSCGRG00001008710	-	72	56.757	ENSLACG00000007177	RBM12B	94	56.757	Latimeria_chalumnae
ENSCGRG00001008710	-	65	53.247	ENSLOCG00000018344	rbm12b	86	53.247	Lepisosteus_oculatus
ENSCGRG00001008710	-	97	73.325	ENSLAFG00000029949	RBM12B	100	73.357	Loxodonta_africana
ENSCGRG00001008710	-	97	74.943	ENSMFAG00000045430	RBM12B	100	74.943	Macaca_fascicularis
ENSCGRG00001008710	-	97	76.417	ENSMMUG00000005558	RBM12B	100	76.417	Macaca_mulatta
ENSCGRG00001008710	-	97	74.943	ENSMNEG00000041292	RBM12B	100	74.943	Macaca_nemestrina
ENSCGRG00001008710	-	97	75.878	ENSMLEG00000037288	RBM12B	100	75.878	Mandrillus_leucophaeus
ENSCGRG00001008710	-	56	31.122	ENSMAMG00000012038	zgc:153215	94	31.122	Mastacembelus_armatus
ENSCGRG00001008710	-	65	49.351	ENSMAMG00000011998	rbm12b	86	49.351	Mastacembelus_armatus
ENSCGRG00001008710	-	65	48.052	ENSMZEG00005014845	rbm12b	85	47.297	Maylandia_zebra
ENSCGRG00001008710	-	65	48.052	ENSMZEG00005015005	rbm12b	86	48.052	Maylandia_zebra
ENSCGRG00001008710	-	56	57.171	ENSMGAG00000011985	RBM12B	99	57.087	Meleagris_gallopavo
ENSCGRG00001008710	-	97	94.174	ENSMAUG00000021752	-	100	94.174	Mesocricetus_auratus
ENSCGRG00001008710	-	97	76.682	ENSMICG00000036969	RBM12B	100	77.713	Microcebus_murinus
ENSCGRG00001008710	-	97	86.698	ENSMOCG00000005603	-	100	86.698	Microtus_ochrogaster
ENSCGRG00001008710	-	76	38.889	ENSMMOG00000002404	rbm12b	94	38.477	Mola_mola
ENSCGRG00001008710	-	98	60.588	ENSMODG00000007436	RBM12B	99	58.324	Monodelphis_domestica
ENSCGRG00001008710	-	67	48.718	ENSMALG00000012059	rbm12b	88	48.718	Monopterus_albus
ENSCGRG00001008710	-	97	78.916	ENSMUSG00000052137	Rbm12b2	100	78.916	Mus_musculus
ENSCGRG00001008710	-	97	79.505	ENSMUSG00000046667	Rbm12b1	100	79.505	Mus_musculus
ENSCGRG00001008710	-	97	79.505	MGP_SPRETEiJ_G0026766	-	100	79.505	Mus_spretus
ENSCGRG00001008710	-	97	72.492	MGP_SPRETEiJ_G0026765	-	100	73.043	Mus_spretus
ENSCGRG00001008710	-	97	73.867	ENSMPUG00000018637	RBM12B	100	65.170	Mustela_putorius_furo
ENSCGRG00001008710	-	97	66.702	ENSMLUG00000002359	RBM12B	100	69.489	Myotis_lucifugus
ENSCGRG00001008710	-	97	73.838	ENSNGAG00000002801	-	100	71.892	Nannospalax_galili
ENSCGRG00001008710	-	65	48.052	ENSNBRG00000015057	rbm12b	86	48.052	Neolamprologus_brichardi
ENSCGRG00001008710	-	97	76.610	ENSNLEG00000032050	RBM12B	100	76.384	Nomascus_leucogenys
ENSCGRG00001008710	-	97	70.168	ENSODEG00000019204	RBM12B	100	73.469	Octodon_degus
ENSCGRG00001008710	-	65	48.052	ENSONIG00000020612	rbm12b	86	48.052	Oreochromis_niloticus
ENSCGRG00001008710	-	83	64.189	ENSOANG00000015735	-	98	64.189	Ornithorhynchus_anatinus
ENSCGRG00001008710	-	97	76.579	ENSOCUG00000010353	RBM12B	100	76.579	Oryctolagus_cuniculus
ENSCGRG00001008710	-	65	51.948	ENSORLG00000008228	rbm12b	83	51.948	Oryzias_latipes
ENSCGRG00001008710	-	65	51.948	ENSORLG00020013619	rbm12b	83	51.948	Oryzias_latipes_hni
ENSCGRG00001008710	-	65	51.948	ENSORLG00015019999	rbm12b	83	51.948	Oryzias_latipes_hsok
ENSCGRG00001008710	-	65	51.948	ENSOMEG00000022523	rbm12b	84	51.948	Oryzias_melastigma
ENSCGRG00001008710	-	97	69.200	ENSOGAG00000002979	RBM12B	100	73.005	Otolemur_garnettii
ENSCGRG00001008710	-	97	77.278	ENSPTIG00000020071	RBM12B	100	77.278	Panthera_tigris_altaica
ENSCGRG00001008710	-	97	76.190	ENSPTRG00000020420	RBM12B	100	76.190	Pan_troglodytes
ENSCGRG00001008710	-	97	76.104	ENSPANG00000035535	RBM12B	100	75.991	Papio_anubis
ENSCGRG00001008710	-	55	32.031	ENSPKIG00000014851	zgc:153215	98	31.845	Paramormyrops_kingsleyae
ENSCGRG00001008710	-	65	49.351	ENSPKIG00000018719	rbm12b	86	49.351	Paramormyrops_kingsleyae
ENSCGRG00001008710	-	82	56.291	ENSPSIG00000001348	RBM12B	100	56.291	Pelodiscus_sinensis
ENSCGRG00001008710	-	97	92.399	ENSPEMG00000008279	-	100	92.399	Peromyscus_maniculatus_bairdii
ENSCGRG00001008710	-	97	59.851	ENSPCIG00000008556	RBM12B	100	57.326	Phascolarctos_cinereus
ENSCGRG00001008710	-	65	49.351	ENSPFOG00000020937	rbm12b	83	49.351	Poecilia_formosa
ENSCGRG00001008710	-	50	51.190	ENSPFOG00000017451	zgc:153215	67	51.190	Poecilia_formosa
ENSCGRG00001008710	-	65	49.351	ENSPLAG00000018782	rbm12b	86	49.351	Poecilia_latipinna
ENSCGRG00001008710	-	65	49.351	ENSPMEG00000011418	rbm12b	86	49.351	Poecilia_mexicana
ENSCGRG00001008710	-	65	49.351	ENSPREG00000020770	rbm12b	86	49.351	Poecilia_reticulata
ENSCGRG00001008710	-	97	66.267	ENSPPYG00000018745	RBM12B	100	73.351	Pongo_abelii
ENSCGRG00001008710	-	97	77.549	ENSPCOG00000023546	RBM12B	100	77.549	Propithecus_coquereli
ENSCGRG00001008710	-	97	71.690	ENSPVAG00000011803	RBM12B	100	71.259	Pteropus_vampyrus
ENSCGRG00001008710	-	65	48.052	ENSPNYG00000016696	rbm12b	86	48.052	Pundamilia_nyererei
ENSCGRG00001008710	-	65	50.649	ENSPNAG00000008126	rbm12b	84	50.649	Pygocentrus_nattereri
ENSCGRG00001008710	-	56	30.270	ENSPNAG00000025628	zgc:153215	77	57.143	Pygocentrus_nattereri
ENSCGRG00001008710	-	97	79.695	ENSRNOG00000016330	Rbm12b	100	79.695	Rattus_norvegicus
ENSCGRG00001008710	-	86	80.000	ENSRNOG00000055292	LOC679087	100	80.000	Rattus_norvegicus
ENSCGRG00001008710	-	97	77.438	ENSRBIG00000035046	RBM12B	100	77.438	Rhinopithecus_bieti
ENSCGRG00001008710	-	97	76.725	ENSRROG00000023660	RBM12B	100	75.870	Rhinopithecus_roxellana
ENSCGRG00001008710	-	97	75.000	ENSSBOG00000027592	RBM12B	100	75.113	Saimiri_boliviensis_boliviensis
ENSCGRG00001008710	-	97	60.483	ENSSHAG00000015335	RBM12B	100	57.209	Sarcophilus_harrisii
ENSCGRG00001008710	-	65	49.351	ENSSFOG00015001584	rbm12b	86	49.351	Scleropages_formosus
ENSCGRG00001008710	-	56	34.394	ENSSFOG00015009427	zgc:153215	99	33.996	Scleropages_formosus
ENSCGRG00001008710	-	65	48.052	ENSSMAG00000019708	rbm12b	86	48.052	Scophthalmus_maximus
ENSCGRG00001008710	-	71	41.782	ENSSDUG00000006856	rbm12b	95	41.352	Seriola_dumerili
ENSCGRG00001008710	-	56	50.000	ENSSLDG00000013581	zgc:153215	78	47.826	Seriola_lalandi_dorsalis
ENSCGRG00001008710	-	65	48.052	ENSSLDG00000016156	rbm12b	86	48.052	Seriola_lalandi_dorsalis
ENSCGRG00001008710	-	71	72.258	ENSSARG00000011845	-	84	72.258	Sorex_araneus
ENSCGRG00001008710	-	56	54.651	ENSSPUG00000016954	RBM12B	91	54.651	Sphenodon_punctatus
ENSCGRG00001008710	-	76	39.406	ENSSPAG00000006774	rbm12b	100	39.010	Stegastes_partitus
ENSCGRG00001008710	-	98	74.397	ENSSSCG00000006110	RBM12B	100	74.049	Sus_scrofa
ENSCGRG00001008710	-	58	53.965	ENSTGUG00000011860	RBM12B	100	53.786	Taeniopygia_guttata
ENSCGRG00001008710	-	65	49.351	ENSTRUG00000013738	rbm12b	86	49.351	Takifugu_rubripes
ENSCGRG00001008710	-	80	72.103	ENSTBEG00000000449	RBM12B	84	72.103	Tupaia_belangeri
ENSCGRG00001008710	-	97	75.905	ENSUAMG00000023639	RBM12B	100	75.905	Ursus_americanus
ENSCGRG00001008710	-	97	72.914	ENSUMAG00000016008	RBM12B	100	72.264	Ursus_maritimus
ENSCGRG00001008710	-	84	88.699	ENSVPAG00000001080	RBM12B	90	88.699	Vicugna_pacos
ENSCGRG00001008710	-	97	76.457	ENSVVUG00000002694	RBM12B	100	76.000	Vulpes_vulpes
ENSCGRG00001008710	-	63	37.545	ENSXETG00000014696	rbm12b	77	37.545	Xenopus_tropicalis
ENSCGRG00001008710	-	87	44.615	ENSXETG00000014694	rbm12b	100	47.143	Xenopus_tropicalis
ENSCGRG00001008710	-	65	49.351	ENSXMAG00000014213	rbm12b	86	49.351	Xiphophorus_maculatus