EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001008805 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1003 bases
Position: chrscaffold_4:66920869-66921871
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006504	zf-U11-48K	PF05253.12	9.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001010230	-	882	-	ENSCGRP00001006504	293 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001008805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001008805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001008805	-	95	76.577	ENSCGRG00001001076	-	99	77.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001008805	-	95	69.552	ENSG00000168566	SNRNP48	99	70.149	Homo_sapiens
ENSCGRG00001008805	-	78	42.231	ENSAPOG00000021430	snrnp48	85	39.865	Acanthochromis_polyacanthus
ENSCGRG00001008805	-	95	66.279	ENSAMEG00000017349	SNRNP48	99	66.860	Ailuropoda_melanoleuca
ENSCGRG00001008805	-	84	39.338	ENSACIG00000002032	snrnp48	84	39.236	Amphilophus_citrinellus
ENSCGRG00001008805	-	79	41.569	ENSAOCG00000010562	snrnp48	86	39.404	Amphiprion_ocellaris
ENSCGRG00001008805	-	74	42.083	ENSAPEG00000003231	snrnp48	86	39.667	Amphiprion_percula
ENSCGRG00001008805	-	72	44.635	ENSATEG00000020210	snrnp48	84	41.581	Anabas_testudineus
ENSCGRG00001008805	-	81	53.846	ENSACAG00000002811	SNRNP48	89	53.846	Anolis_carolinensis
ENSCGRG00001008805	-	95	68.358	ENSANAG00000033538	SNRNP48	99	68.955	Aotus_nancymaae
ENSCGRG00001008805	-	89	38.019	ENSAMXG00000015309	snrnp48	92	38.019	Astyanax_mexicanus
ENSCGRG00001008805	-	95	63.690	ENSBTAG00000001123	SNRNP48	99	65.179	Bos_taurus
ENSCGRG00001008805	-	95	67.761	ENSCJAG00000021330	SNRNP48	99	69.552	Callithrix_jacchus
ENSCGRG00001008805	-	94	68.976	ENSCAFG00000009574	SNRNP48	82	69.578	Canis_familiaris
ENSCGRG00001008805	-	94	68.976	ENSCAFG00020013203	SNRNP48	98	69.578	Canis_lupus_dingo
ENSCGRG00001008805	-	95	64.881	ENSCHIG00000015216	SNRNP48	99	66.964	Capra_hircus
ENSCGRG00001008805	-	95	68.060	ENSTSYG00000000698	SNRNP48	99	69.851	Carlito_syrichta
ENSCGRG00001008805	-	89	66.337	ENSCAPG00000006768	SNRNP48	99	67.657	Cavia_aperea
ENSCGRG00001008805	-	95	67.761	ENSCPOG00000007910	SNRNP48	99	68.955	Cavia_porcellus
ENSCGRG00001008805	-	95	68.060	ENSCCAG00000035652	SNRNP48	99	68.657	Cebus_capucinus
ENSCGRG00001008805	-	95	68.358	ENSCATG00000033947	SNRNP48	99	68.955	Cercocebus_atys
ENSCGRG00001008805	-	95	67.164	ENSCLAG00000003765	SNRNP48	99	68.955	Chinchilla_lanigera
ENSCGRG00001008805	-	95	68.955	ENSCSAG00000007409	SNRNP48	99	69.552	Chlorocebus_sabaeus
ENSCGRG00001008805	-	84	53.242	ENSCPBG00000019146	SNRNP48	91	53.242	Chrysemys_picta_bellii
ENSCGRG00001008805	-	75	30.672	ENSCING00000004121	-	70	30.672	Ciona_intestinalis
ENSCGRG00001008805	-	95	68.955	ENSCANG00000030017	SNRNP48	99	69.552	Colobus_angolensis_palliatus
ENSCGRG00001008805	-	95	76.577	ENSCGRG00000007781	Snrnp48	99	77.778	Cricetulus_griseus_crigri
ENSCGRG00001008805	-	75	40.574	ENSCSEG00000000722	snrnp48	67	40.574	Cynoglossus_semilaevis
ENSCGRG00001008805	-	89	40.141	ENSCVAG00000019829	snrnp48	71	40.141	Cyprinodon_variegatus
ENSCGRG00001008805	-	87	38.989	ENSDARG00000039989	snrnp48	86	39.597	Danio_rerio
ENSCGRG00001008805	-	93	66.767	ENSDNOG00000014978	SNRNP48	97	68.882	Dasypus_novemcinctus
ENSCGRG00001008805	-	95	68.155	ENSDORG00000015140	Snrnp48	99	68.452	Dipodomys_ordii
ENSCGRG00001008805	-	95	68.657	ENSEASG00005012021	SNRNP48	99	69.254	Equus_asinus_asinus
ENSCGRG00001008805	-	95	68.955	ENSECAG00000026937	SNRNP48	99	69.552	Equus_caballus
ENSCGRG00001008805	-	95	50.599	ENSEEUG00000015437	SNRNP48	99	51.796	Erinaceus_europaeus
ENSCGRG00001008805	-	92	38.538	ENSELUG00000009766	snrnp48	78	39.865	Esox_lucius
ENSCGRG00001008805	-	95	68.358	ENSFCAG00000018853	SNRNP48	99	68.955	Felis_catus
ENSCGRG00001008805	-	82	53.265	ENSFALG00000007797	SNRNP48	93	53.265	Ficedula_albicollis
ENSCGRG00001008805	-	95	68.060	ENSFDAG00000009231	SNRNP48	99	69.254	Fukomys_damarensis
ENSCGRG00001008805	-	61	47.291	ENSFHEG00000014647	snrnp48	89	42.146	Fundulus_heteroclitus
ENSCGRG00001008805	-	69	40.271	ENSGMOG00000018599	-	71	40.678	Gadus_morhua
ENSCGRG00001008805	-	79	55.678	ENSGALG00000013005	SNRNP48	91	55.556	Gallus_gallus
ENSCGRG00001008805	-	80	42.578	ENSGAFG00000021639	snrnp48	80	42.254	Gambusia_affinis
ENSCGRG00001008805	-	72	42.918	ENSGACG00000017756	-	83	39.649	Gasterosteus_aculeatus
ENSCGRG00001008805	-	83	52.174	ENSGAGG00000000865	SNRNP48	97	52.174	Gopherus_agassizii
ENSCGRG00001008805	-	95	69.254	ENSGGOG00000013220	SNRNP48	99	69.851	Gorilla_gorilla
ENSCGRG00001008805	-	80	41.406	ENSHBUG00000017066	snrnp48	81	39.236	Haplochromis_burtoni
ENSCGRG00001008805	-	95	68.358	ENSHGLG00000015241	SNRNP48	99	68.955	Heterocephalus_glaber_female
ENSCGRG00001008805	-	95	68.358	ENSHGLG00100010027	SNRNP48	99	68.955	Heterocephalus_glaber_male
ENSCGRG00001008805	-	72	42.060	ENSHCOG00000014066	snrnp48	84	39.535	Hippocampus_comes
ENSCGRG00001008805	-	95	71.940	ENSSTOG00000014635	SNRNP48	99	72.537	Ictidomys_tridecemlineatus
ENSCGRG00001008805	-	95	67.463	ENSJJAG00000011495	Snrnp48	99	68.060	Jaculus_jaculus
ENSCGRG00001008805	-	72	42.489	ENSKMAG00000016514	snrnp48	88	39.216	Kryptolebias_marmoratus
ENSCGRG00001008805	-	75	41.975	ENSLBEG00000026249	snrnp48	85	39.456	Labrus_bergylta
ENSCGRG00001008805	-	92	43.770	ENSLACG00000003958	SNRNP48	93	41.975	Latimeria_chalumnae
ENSCGRG00001008805	-	80	45.756	ENSLOCG00000004187	snrnp48	89	45.277	Lepisosteus_oculatus
ENSCGRG00001008805	-	95	65.672	ENSLAFG00000011152	SNRNP48	99	67.761	Loxodonta_africana
ENSCGRG00001008805	-	95	69.254	ENSMFAG00000045216	SNRNP48	99	69.851	Macaca_fascicularis
ENSCGRG00001008805	-	95	69.254	ENSMMUG00000014785	SNRNP48	99	69.851	Macaca_mulatta
ENSCGRG00001008805	-	95	68.955	ENSMNEG00000042269	SNRNP48	99	69.552	Macaca_nemestrina
ENSCGRG00001008805	-	95	69.254	ENSMLEG00000034004	SNRNP48	99	69.851	Mandrillus_leucophaeus
ENSCGRG00001008805	-	75	43.210	ENSMAMG00000018673	snrnp48	74	41.034	Mastacembelus_armatus
ENSCGRG00001008805	-	81	53.793	ENSMGAG00000006037	SNRNP48	98	53.793	Meleagris_gallopavo
ENSCGRG00001008805	-	95	75.075	ENSMAUG00000011944	Snrnp48	99	76.276	Mesocricetus_auratus
ENSCGRG00001008805	-	95	69.254	ENSMICG00000012497	SNRNP48	99	69.851	Microcebus_murinus
ENSCGRG00001008805	-	95	73.874	ENSMOCG00000015555	Snrnp48	99	75.075	Microtus_ochrogaster
ENSCGRG00001008805	-	56	46.486	ENSMMOG00000003072	-	58	46.486	Mola_mola
ENSCGRG00001008805	-	83	58.000	ENSMODG00000009996	SNRNP48	93	56.232	Monodelphis_domestica
ENSCGRG00001008805	-	73	44.068	ENSMALG00000005725	snrnp48	82	41.608	Monopterus_albus
ENSCGRG00001008805	-	95	72.673	MGP_CAROLIEiJ_G0018441	Snrnp48	99	73.874	Mus_caroli
ENSCGRG00001008805	-	95	72.673	ENSMUSG00000021431	Snrnp48	99	73.874	Mus_musculus
ENSCGRG00001008805	-	95	72.973	MGP_PahariEiJ_G0019509	Snrnp48	99	74.174	Mus_pahari
ENSCGRG00001008805	-	95	72.673	MGP_SPRETEiJ_G0019321	Snrnp48	99	73.874	Mus_spretus
ENSCGRG00001008805	-	95	70.149	ENSNGAG00000004849	Snrnp48	99	70.746	Nannospalax_galili
ENSCGRG00001008805	-	80	41.016	ENSNBRG00000012127	snrnp48	82	39.310	Neolamprologus_brichardi
ENSCGRG00001008805	-	95	69.552	ENSNLEG00000011667	SNRNP48	99	70.149	Nomascus_leucogenys
ENSCGRG00001008805	-	91	62.305	ENSOPRG00000015471	SNRNP48	100	62.733	Ochotona_princeps
ENSCGRG00001008805	-	88	40.000	ENSONIG00000001520	snrnp48	84	40.000	Oreochromis_niloticus
ENSCGRG00001008805	-	57	59.043	ENSOANG00000019888	-	90	59.043	Ornithorhynchus_anatinus
ENSCGRG00001008805	-	80	73.585	ENSOCUG00000005168	SNRNP48	99	70.199	Oryctolagus_cuniculus
ENSCGRG00001008805	-	72	44.444	ENSORLG00000015654	snrnp48	83	40.753	Oryzias_latipes
ENSCGRG00001008805	-	72	43.590	ENSORLG00020015976	snrnp48	71	40.411	Oryzias_latipes_hni
ENSCGRG00001008805	-	72	44.872	ENSORLG00015022379	snrnp48	71	41.438	Oryzias_latipes_hsok
ENSCGRG00001008805	-	72	42.735	ENSOMEG00000022007	snrnp48	83	39.519	Oryzias_melastigma
ENSCGRG00001008805	-	84	69.338	ENSOGAG00000005275	SNRNP48	90	70.134	Otolemur_garnettii
ENSCGRG00001008805	-	82	68.198	ENSOARG00000017319	SNRNP48	99	69.258	Ovis_aries
ENSCGRG00001008805	-	95	69.552	ENSPPAG00000032873	SNRNP48	99	70.149	Pan_paniscus
ENSCGRG00001008805	-	95	68.657	ENSPPRG00000004283	SNRNP48	99	69.254	Panthera_pardus
ENSCGRG00001008805	-	82	70.671	ENSPTIG00000013502	SNRNP48	99	71.378	Panthera_tigris_altaica
ENSCGRG00001008805	-	95	69.552	ENSPTRG00000017703	SNRNP48	99	70.149	Pan_troglodytes
ENSCGRG00001008805	-	95	69.254	ENSPANG00000000771	SNRNP48	99	69.851	Papio_anubis
ENSCGRG00001008805	-	89	40.850	ENSPKIG00000013703	snrnp48	63	40.850	Paramormyrops_kingsleyae
ENSCGRG00001008805	-	83	52.013	ENSPSIG00000002213	SNRNP48	94	52.013	Pelodiscus_sinensis
ENSCGRG00001008805	-	73	42.797	ENSPMGG00000008120	snrnp48	82	42.797	Periophthalmus_magnuspinnatus
ENSCGRG00001008805	-	95	75.075	ENSPEMG00000008872	Snrnp48	99	76.276	Peromyscus_maniculatus_bairdii
ENSCGRG00001008805	-	80	43.750	ENSPFOG00000003578	snrnp48	84	41.497	Poecilia_formosa
ENSCGRG00001008805	-	67	44.444	ENSPLAG00000002290	snrnp48	73	44.444	Poecilia_latipinna
ENSCGRG00001008805	-	80	43.359	ENSPMEG00000018033	snrnp48	84	41.156	Poecilia_mexicana
ENSCGRG00001008805	-	80	43.359	ENSPREG00000018541	snrnp48	80	42.403	Poecilia_reticulata
ENSCGRG00001008805	-	95	68.358	ENSPPYG00000016209	SNRNP48	99	68.955	Pongo_abelii
ENSCGRG00001008805	-	79	58.088	ENSPCAG00000011991	SNRNP48	100	58.088	Procavia_capensis
ENSCGRG00001008805	-	95	68.358	ENSPVAG00000002854	SNRNP48	99	68.955	Pteropus_vampyrus
ENSCGRG00001008805	-	88	37.011	ENSPNYG00000015399	snrnp48	90	39.655	Pundamilia_nyererei
ENSCGRG00001008805	-	95	72.673	ENSRNOG00000013756	Snrnp48	99	73.874	Rattus_norvegicus
ENSCGRG00001008805	-	84	71.134	ENSRBIG00000043856	SNRNP48	96	71.192	Rhinopithecus_bieti
ENSCGRG00001008805	-	95	68.955	ENSRROG00000043229	SNRNP48	99	69.552	Rhinopithecus_roxellana
ENSCGRG00001008805	-	95	68.955	ENSSBOG00000019486	SNRNP48	99	69.552	Saimiri_boliviensis_boliviensis
ENSCGRG00001008805	-	82	57.383	ENSSHAG00000014483	SNRNP48	99	55.977	Sarcophilus_harrisii
ENSCGRG00001008805	-	72	44.538	ENSSFOG00015006610	snrnp48	68	42.123	Scleropages_formosus
ENSCGRG00001008805	-	85	41.007	ENSSDUG00000014953	snrnp48	84	40.411	Seriola_dumerili
ENSCGRG00001008805	-	91	40.830	ENSSLDG00000005989	snrnp48	84	40.345	Seriola_lalandi_dorsalis
ENSCGRG00001008805	-	75	54.924	ENSSPUG00000006257	SNRNP48	85	51.852	Sphenodon_punctatus
ENSCGRG00001008805	-	72	41.453	ENSSPAG00000006454	snrnp48	87	38.742	Stegastes_partitus
ENSCGRG00001008805	-	82	52.414	ENSTGUG00000007575	SNRNP48	93	52.414	Taeniopygia_guttata
ENSCGRG00001008805	-	72	44.635	ENSTRUG00000007031	snrnp48	87	42.193	Takifugu_rubripes
ENSCGRG00001008805	-	88	39.007	ENSTNIG00000012977	-	82	38.869	Tetraodon_nigroviridis
ENSCGRG00001008805	-	78	73.308	ENSTBEG00000015620	SNRNP48	79	73.308	Tupaia_belangeri
ENSCGRG00001008805	-	95	66.567	ENSTTRG00000016715	SNRNP48	99	67.463	Tursiops_truncatus
ENSCGRG00001008805	-	95	68.657	ENSUAMG00000003690	SNRNP48	99	68.955	Ursus_americanus
ENSCGRG00001008805	-	82	66.431	ENSVPAG00000003557	SNRNP48	99	67.491	Vicugna_pacos
ENSCGRG00001008805	-	94	69.277	ENSVVUG00000004996	SNRNP48	98	69.880	Vulpes_vulpes
ENSCGRG00001008805	-	83	45.745	ENSXETG00000020447	snrnp48	86	44.595	Xenopus_tropicalis
ENSCGRG00001008805	-	71	42.731	ENSXCOG00000004478	snrnp48	84	38.408	Xiphophorus_couchianus
ENSCGRG00001008805	-	80	43.969	ENSXMAG00000013595	snrnp48	80	42.606	Xiphophorus_maculatus