EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001008933 (Gene tree)
Gene ID: -
Gene Symbol: Sf3a1
Alias: 1200014H24Rik|5930416L09Rik
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 26095 bases
Position: chrscaffold_13:1345601-1371695
Accession: 100754437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006595	PRP21_like_P	PF12230.8	5.3e-52	1	1
ENSCGRP00001006595	Surp	PF01805.20	6.5e-46	1	2
ENSCGRP00001006595	Surp	PF01805.20	6.5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001010385	-	6950	-	ENSCGRP00001006595	793 (aa)	XP_003509056	G3I142

Gene Model

Click here to download ENSCGRG00001008933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001008933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001008933	Sf3a1	100	98.235	ENSG00000099995	SF3A1	100	98.235	Homo_sapiens
ENSCGRG00001008933	Sf3a1	100	83.522	ENSAPOG00000020465	sf3a1	97	86.447	Acanthochromis_polyacanthus
ENSCGRG00001008933	Sf3a1	100	97.862	ENSAMEG00000007737	SF3A1	100	97.862	Ailuropoda_melanoleuca
ENSCGRG00001008933	Sf3a1	100	84.277	ENSACIG00000020672	sf3a1	97	86.316	Amphilophus_citrinellus
ENSCGRG00001008933	Sf3a1	100	83.145	ENSAOCG00000003060	sf3a1	97	86.184	Amphiprion_ocellaris
ENSCGRG00001008933	Sf3a1	100	83.270	ENSAPEG00000010735	sf3a1	97	86.316	Amphiprion_percula
ENSCGRG00001008933	Sf3a1	96	85.286	ENSATEG00000021201	sf3a1	96	85.921	Anabas_testudineus
ENSCGRG00001008933	Sf3a1	95	93.791	ENSAPLG00000009057	SF3A1	98	93.701	Anas_platyrhynchos
ENSCGRG00001008933	Sf3a1	100	85.714	ENSACAG00000009415	SF3A1	100	87.069	Anolis_carolinensis
ENSCGRG00001008933	Sf3a1	100	98.361	ENSANAG00000032045	SF3A1	100	98.361	Aotus_nancymaae
ENSCGRG00001008933	Sf3a1	100	83.879	ENSACLG00000012622	sf3a1	97	86.166	Astatotilapia_calliptera
ENSCGRG00001008933	Sf3a1	99	83.312	ENSAMXG00000005382	sf3a1	97	85.452	Astyanax_mexicanus
ENSCGRG00001008933	Sf3a1	100	98.613	ENSBTAG00000003390	SF3A1	100	98.613	Bos_taurus
ENSCGRG00001008933	Sf3a1	84	43.806	WBGene00004188	prp-21	92	44.096	Caenorhabditis_elegans
ENSCGRG00001008933	Sf3a1	100	98.487	ENSCJAG00000010370	SF3A1	100	98.487	Callithrix_jacchus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSCAFG00000012559	SF3A1	100	98.361	Canis_familiaris
ENSCGRG00001008933	Sf3a1	100	98.361	ENSCAFG00020000838	SF3A1	100	98.361	Canis_lupus_dingo
ENSCGRG00001008933	Sf3a1	100	98.487	ENSCHIG00000018642	SF3A1	100	98.487	Capra_hircus
ENSCGRG00001008933	Sf3a1	100	98.739	ENSTSYG00000004739	SF3A1	100	98.739	Carlito_syrichta
ENSCGRG00001008933	Sf3a1	94	80.908	ENSCAPG00000015414	SF3A1	97	81.081	Cavia_aperea
ENSCGRG00001008933	Sf3a1	100	98.361	ENSCPOG00000014589	SF3A1	100	98.361	Cavia_porcellus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSCCAG00000032006	SF3A1	100	98.361	Cebus_capucinus
ENSCGRG00001008933	Sf3a1	100	98.613	ENSCATG00000029241	SF3A1	100	98.613	Cercocebus_atys
ENSCGRG00001008933	Sf3a1	100	98.108	ENSCLAG00000006508	SF3A1	100	98.108	Chinchilla_lanigera
ENSCGRG00001008933	Sf3a1	100	98.487	ENSCSAG00000009470	SF3A1	100	98.487	Chlorocebus_sabaeus
ENSCGRG00001008933	Sf3a1	61	98.165	ENSCHOG00000005201	SF3A1	69	98.165	Choloepus_hoffmanni
ENSCGRG00001008933	Sf3a1	100	90.932	ENSCPBG00000007595	SF3A1	100	91.058	Chrysemys_picta_bellii
ENSCGRG00001008933	Sf3a1	96	53.040	ENSCING00000008526	-	65	58.027	Ciona_intestinalis
ENSCGRG00001008933	Sf3a1	96	52.000	ENSCSAVG00000005608	-	90	65.179	Ciona_savignyi
ENSCGRG00001008933	Sf3a1	100	98.487	ENSCANG00000033564	SF3A1	100	98.487	Colobus_angolensis_palliatus
ENSCGRG00001008933	Sf3a1	100	100.000	ENSCGRG00000006127	Sf3a1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001008933	Sf3a1	100	81.533	ENSCSEG00000010792	sf3a1	97	83.574	Cynoglossus_semilaevis
ENSCGRG00001008933	Sf3a1	100	82.767	ENSCVAG00000004560	sf3a1	97	84.342	Cyprinodon_variegatus
ENSCGRG00001008933	Sf3a1	100	82.286	ENSDARG00000041887	sf3a1	97	84.888	Danio_rerio
ENSCGRG00001008933	Sf3a1	100	98.113	ENSDNOG00000010629	SF3A1	100	98.113	Dasypus_novemcinctus
ENSCGRG00001008933	Sf3a1	100	98.487	ENSDORG00000005613	Sf3a1	100	98.487	Dipodomys_ordii
ENSCGRG00001008933	Sf3a1	79	61.308	FBgn0266917	Sf3a1	82	59.745	Drosophila_melanogaster
ENSCGRG00001008933	Sf3a1	84	96.707	ENSETEG00000017194	SF3A1	100	94.587	Echinops_telfairi
ENSCGRG00001008933	Sf3a1	98	66.102	ENSEBUG00000001285	sf3a1	76	68.196	Eptatretus_burgeri
ENSCGRG00001008933	Sf3a1	100	98.739	ENSEASG00005010254	SF3A1	100	98.739	Equus_asinus_asinus
ENSCGRG00001008933	Sf3a1	100	98.739	ENSECAG00000023962	SF3A1	100	98.739	Equus_caballus
ENSCGRG00001008933	Sf3a1	73	93.449	ENSEEUG00000003159	SF3A1	82	93.443	Erinaceus_europaeus
ENSCGRG00001008933	Sf3a1	100	82.080	ENSELUG00000022578	sf3a1	97	83.486	Esox_lucius
ENSCGRG00001008933	Sf3a1	100	98.361	ENSFCAG00000011932	SF3A1	100	98.361	Felis_catus
ENSCGRG00001008933	Sf3a1	95	92.857	ENSFALG00000006944	SF3A1	96	93.035	Ficedula_albicollis
ENSCGRG00001008933	Sf3a1	100	98.613	ENSFDAG00000009560	SF3A1	100	98.613	Fukomys_damarensis
ENSCGRG00001008933	Sf3a1	100	83.899	ENSFHEG00000010866	sf3a1	97	85.526	Fundulus_heteroclitus
ENSCGRG00001008933	Sf3a1	100	80.605	ENSGMOG00000016024	sf3a1	97	80.940	Gadus_morhua
ENSCGRG00001008933	Sf3a1	95	93.783	ENSGALG00000007937	SF3A1	96	93.693	Gallus_gallus
ENSCGRG00001008933	Sf3a1	100	82.893	ENSGAFG00000009111	sf3a1	97	84.605	Gambusia_affinis
ENSCGRG00001008933	Sf3a1	100	82.242	ENSGACG00000011893	sf3a1	96	83.794	Gasterosteus_aculeatus
ENSCGRG00001008933	Sf3a1	96	90.933	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSCGRG00001008933	Sf3a1	100	98.235	ENSGGOG00000012631	SF3A1	100	98.235	Gorilla_gorilla
ENSCGRG00001008933	Sf3a1	100	83.879	ENSHBUG00000015795	sf3a1	97	86.166	Haplochromis_burtoni
ENSCGRG00001008933	Sf3a1	100	98.865	ENSHGLG00000007907	SF3A1	100	98.865	Heterocephalus_glaber_female
ENSCGRG00001008933	Sf3a1	100	98.865	ENSHGLG00100013799	SF3A1	100	98.865	Heterocephalus_glaber_male
ENSCGRG00001008933	Sf3a1	100	80.000	ENSHCOG00000015423	sf3a1	97	81.447	Hippocampus_comes
ENSCGRG00001008933	Sf3a1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.940	Ictalurus_punctatus
ENSCGRG00001008933	Sf3a1	100	98.739	ENSSTOG00000013892	SF3A1	100	98.739	Ictidomys_tridecemlineatus
ENSCGRG00001008933	Sf3a1	100	98.615	ENSJJAG00000022566	Sf3a1	100	98.615	Jaculus_jaculus
ENSCGRG00001008933	Sf3a1	100	82.516	ENSKMAG00000002400	sf3a1	97	85.132	Kryptolebias_marmoratus
ENSCGRG00001008933	Sf3a1	100	82.390	ENSLBEG00000022974	sf3a1	97	84.211	Labrus_bergylta
ENSCGRG00001008933	Sf3a1	100	87.202	ENSLACG00000003565	SF3A1	96	88.451	Latimeria_chalumnae
ENSCGRG00001008933	Sf3a1	100	84.962	ENSLOCG00000008251	sf3a1	96	86.894	Lepisosteus_oculatus
ENSCGRG00001008933	Sf3a1	100	98.235	ENSLAFG00000000448	SF3A1	100	98.235	Loxodonta_africana
ENSCGRG00001008933	Sf3a1	98	61.401	ENSLAFG00000026032	-	96	61.299	Loxodonta_africana
ENSCGRG00001008933	Sf3a1	100	98.361	ENSMFAG00000031979	SF3A1	100	98.361	Macaca_fascicularis
ENSCGRG00001008933	Sf3a1	100	98.361	ENSMMUG00000005547	SF3A1	100	98.361	Macaca_mulatta
ENSCGRG00001008933	Sf3a1	100	98.235	ENSMNEG00000037229	SF3A1	100	98.235	Macaca_nemestrina
ENSCGRG00001008933	Sf3a1	100	98.487	ENSMLEG00000041908	SF3A1	100	98.487	Mandrillus_leucophaeus
ENSCGRG00001008933	Sf3a1	97	85.511	ENSMAMG00000006460	sf3a1	95	86.842	Mastacembelus_armatus
ENSCGRG00001008933	Sf3a1	100	83.879	ENSMZEG00005009633	sf3a1	97	86.166	Maylandia_zebra
ENSCGRG00001008933	Sf3a1	95	93.783	ENSMGAG00000001330	SF3A1	99	93.693	Meleagris_gallopavo
ENSCGRG00001008933	Sf3a1	92	95.765	ENSMAUG00000020317	Sf3a1	94	95.765	Mesocricetus_auratus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSMICG00000010038	SF3A1	100	98.361	Microcebus_murinus
ENSCGRG00001008933	Sf3a1	100	99.622	ENSMOCG00000008438	Sf3a1	100	99.622	Microtus_ochrogaster
ENSCGRG00001008933	Sf3a1	100	81.258	ENSMMOG00000015588	sf3a1	96	83.026	Mola_mola
ENSCGRG00001008933	Sf3a1	100	97.226	ENSMODG00000009270	SF3A1	100	97.226	Monodelphis_domestica
ENSCGRG00001008933	Sf3a1	100	84.257	ENSMALG00000000148	sf3a1	99	85.695	Monopterus_albus
ENSCGRG00001008933	Sf3a1	100	98.739	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.739	Mus_caroli
ENSCGRG00001008933	Sf3a1	100	98.739	ENSMUSG00000002129	Sf3a1	100	98.739	Mus_musculus
ENSCGRG00001008933	Sf3a1	100	98.739	MGP_PahariEiJ_G0016862	Sf3a1	100	98.739	Mus_pahari
ENSCGRG00001008933	Sf3a1	100	98.739	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.739	Mus_spretus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSMPUG00000013144	SF3A1	100	98.361	Mustela_putorius_furo
ENSCGRG00001008933	Sf3a1	100	98.487	ENSMLUG00000002139	SF3A1	100	98.487	Myotis_lucifugus
ENSCGRG00001008933	Sf3a1	100	98.865	ENSNGAG00000016977	Sf3a1	100	98.865	Nannospalax_galili
ENSCGRG00001008933	Sf3a1	100	83.271	ENSNBRG00000016642	sf3a1	96	86.166	Neolamprologus_brichardi
ENSCGRG00001008933	Sf3a1	100	98.487	ENSNLEG00000003686	SF3A1	100	98.487	Nomascus_leucogenys
ENSCGRG00001008933	Sf3a1	96	87.632	ENSMEUG00000008741	SF3A1	100	87.368	Notamacropus_eugenii
ENSCGRG00001008933	Sf3a1	100	97.856	ENSOPRG00000016636	SF3A1	100	97.856	Ochotona_princeps
ENSCGRG00001008933	Sf3a1	100	98.613	ENSODEG00000002571	SF3A1	100	98.613	Octodon_degus
ENSCGRG00001008933	Sf3a1	100	84.025	ENSONIG00000010848	sf3a1	97	85.789	Oreochromis_niloticus
ENSCGRG00001008933	Sf3a1	100	98.235	ENSOCUG00000007633	SF3A1	100	98.235	Oryctolagus_cuniculus
ENSCGRG00001008933	Sf3a1	96	81.890	ENSORLG00000013050	sf3a1	96	85.007	Oryzias_latipes
ENSCGRG00001008933	Sf3a1	99	80.633	ENSORLG00020003236	sf3a1	94	83.445	Oryzias_latipes_hni
ENSCGRG00001008933	Sf3a1	100	82.013	ENSORLG00015017411	sf3a1	97	84.868	Oryzias_latipes_hsok
ENSCGRG00001008933	Sf3a1	100	82.767	ENSOMEG00000013362	sf3a1	97	84.737	Oryzias_melastigma
ENSCGRG00001008933	Sf3a1	100	98.361	ENSOGAG00000012931	SF3A1	100	98.361	Otolemur_garnettii
ENSCGRG00001008933	Sf3a1	100	96.721	ENSOARG00000006849	SF3A1	100	96.721	Ovis_aries
ENSCGRG00001008933	Sf3a1	100	97.226	ENSPPAG00000041790	SF3A1	100	97.226	Pan_paniscus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSPPRG00000004391	SF3A1	100	98.361	Panthera_pardus
ENSCGRG00001008933	Sf3a1	97	98.316	ENSPTIG00000000844	SF3A1	100	98.316	Panthera_tigris_altaica
ENSCGRG00001008933	Sf3a1	100	98.235	ENSPTRG00000014240	SF3A1	100	98.235	Pan_troglodytes
ENSCGRG00001008933	Sf3a1	100	98.487	ENSPANG00000020772	SF3A1	100	98.487	Papio_anubis
ENSCGRG00001008933	Sf3a1	83	92.308	ENSPSIG00000012803	SF3A1	94	95.385	Pelodiscus_sinensis
ENSCGRG00001008933	Sf3a1	96	84.162	ENSPMGG00000023096	sf3a1	99	84.453	Periophthalmus_magnuspinnatus
ENSCGRG00001008933	Sf3a1	100	99.748	ENSPEMG00000009494	Sf3a1	100	99.748	Peromyscus_maniculatus_bairdii
ENSCGRG00001008933	Sf3a1	69	78.040	ENSPMAG00000007139	-	87	81.008	Petromyzon_marinus
ENSCGRG00001008933	Sf3a1	100	96.974	ENSPCIG00000022692	SF3A1	100	96.974	Phascolarctos_cinereus
ENSCGRG00001008933	Sf3a1	100	74.497	ENSPFOG00000016768	sf3a1	93	78.231	Poecilia_formosa
ENSCGRG00001008933	Sf3a1	100	83.396	ENSPLAG00000017268	sf3a1	97	84.868	Poecilia_latipinna
ENSCGRG00001008933	Sf3a1	84	85.542	ENSPMEG00000019811	sf3a1	98	84.488	Poecilia_mexicana
ENSCGRG00001008933	Sf3a1	100	83.522	ENSPREG00000010347	sf3a1	97	85.395	Poecilia_reticulata
ENSCGRG00001008933	Sf3a1	100	98.487	ENSPPYG00000011707	SF3A1	100	98.487	Pongo_abelii
ENSCGRG00001008933	Sf3a1	57	98.340	ENSPCAG00000003266	SF3A1	57	98.340	Procavia_capensis
ENSCGRG00001008933	Sf3a1	100	98.613	ENSPCOG00000026630	SF3A1	100	98.613	Propithecus_coquereli
ENSCGRG00001008933	Sf3a1	100	94.325	ENSPVAG00000017719	SF3A1	94	97.718	Pteropus_vampyrus
ENSCGRG00001008933	Sf3a1	100	83.879	ENSPNYG00000018706	sf3a1	97	86.166	Pundamilia_nyererei
ENSCGRG00001008933	Sf3a1	96	84.265	ENSPNAG00000003721	sf3a1	97	84.273	Pygocentrus_nattereri
ENSCGRG00001008933	Sf3a1	100	98.865	ENSRNOG00000005218	Sf3a1	100	98.865	Rattus_norvegicus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSRBIG00000032167	SF3A1	100	98.361	Rhinopithecus_bieti
ENSCGRG00001008933	Sf3a1	100	98.361	ENSRROG00000044908	SF3A1	100	98.361	Rhinopithecus_roxellana
ENSCGRG00001008933	Sf3a1	97	94.315	ENSSBOG00000021960	SF3A1	100	98.523	Saimiri_boliviensis_boliviensis
ENSCGRG00001008933	Sf3a1	99	92.785	ENSSHAG00000003666	SF3A1	96	94.737	Sarcophilus_harrisii
ENSCGRG00001008933	Sf3a1	100	82.979	ENSSFOG00015004579	sf3a1	97	85.733	Scleropages_formosus
ENSCGRG00001008933	Sf3a1	100	81.509	ENSSMAG00000004275	sf3a1	97	83.553	Scophthalmus_maximus
ENSCGRG00001008933	Sf3a1	100	83.648	ENSSDUG00000022219	sf3a1	97	85.658	Seriola_dumerili
ENSCGRG00001008933	Sf3a1	100	83.648	ENSSLDG00000012642	sf3a1	97	85.658	Seriola_lalandi_dorsalis
ENSCGRG00001008933	Sf3a1	97	94.948	ENSSARG00000005960	SF3A1	98	95.263	Sorex_araneus
ENSCGRG00001008933	Sf3a1	96	91.839	ENSSPUG00000018863	SF3A1	96	92.996	Sphenodon_punctatus
ENSCGRG00001008933	Sf3a1	100	84.277	ENSSPAG00000011856	sf3a1	97	86.184	Stegastes_partitus
ENSCGRG00001008933	Sf3a1	100	98.487	ENSSSCG00000010002	SF3A1	100	98.487	Sus_scrofa
ENSCGRG00001008933	Sf3a1	95	93.799	ENSTGUG00000010547	SF3A1	99	93.709	Taeniopygia_guttata
ENSCGRG00001008933	Sf3a1	100	81.384	ENSTRUG00000006118	sf3a1	97	82.368	Takifugu_rubripes
ENSCGRG00001008933	Sf3a1	64	84.758	ENSTNIG00000005713	sf3a1	81	84.821	Tetraodon_nigroviridis
ENSCGRG00001008933	Sf3a1	100	91.299	ENSTBEG00000012771	SF3A1	100	91.299	Tupaia_belangeri
ENSCGRG00001008933	Sf3a1	100	98.237	ENSTTRG00000001535	SF3A1	100	98.237	Tursiops_truncatus
ENSCGRG00001008933	Sf3a1	99	97.459	ENSUAMG00000006750	SF3A1	99	97.459	Ursus_americanus
ENSCGRG00001008933	Sf3a1	99	97.449	ENSUMAG00000016665	SF3A1	99	97.449	Ursus_maritimus
ENSCGRG00001008933	Sf3a1	100	98.361	ENSVVUG00000003075	SF3A1	100	98.361	Vulpes_vulpes
ENSCGRG00001008933	Sf3a1	100	85.822	ENSXETG00000016144	sf3a1	96	87.270	Xenopus_tropicalis
ENSCGRG00001008933	Sf3a1	100	83.019	ENSXCOG00000015653	sf3a1	97	84.737	Xiphophorus_couchianus
ENSCGRG00001008933	Sf3a1	100	83.145	ENSXMAG00000002753	sf3a1	97	84.474	Xiphophorus_maculatus