EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001008965 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 384 bases
Position: chrscaffold_0:152470259-152470642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006612	LSM	PF01423.22	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001010416	-	384	-	ENSCGRP00001006612	127 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001008965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001008965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001008965	-	51	43.939	ENSCGRG00001017142	Lsm6	83	43.939
ENSCGRG00001008965	-	57	93.151	ENSCGRG00001017100	-	87	92.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001008965	-	58	92.000	ENSG00000139343	SNRPF	87	92.000	Homo_sapiens
ENSCGRG00001008965	-	57	90.411	ENSAPOG00000003377	snrpf	57	90.411	Acanthochromis_polyacanthus
ENSCGRG00001008965	-	57	93.151	ENSAMEG00000002166	-	86	93.151	Ailuropoda_melanoleuca
ENSCGRG00001008965	-	59	78.947	ENSAMEG00000018718	-	87	80.000	Ailuropoda_melanoleuca
ENSCGRG00001008965	-	57	90.541	ENSACIG00000013216	snrpf	87	90.541	Amphilophus_citrinellus
ENSCGRG00001008965	-	57	90.541	ENSAOCG00000015108	snrpf	87	90.541	Amphiprion_ocellaris
ENSCGRG00001008965	-	57	90.541	ENSAPEG00000022022	snrpf	87	90.541	Amphiprion_percula
ENSCGRG00001008965	-	57	90.411	ENSATEG00000022625	snrpf	78	90.411	Anabas_testudineus
ENSCGRG00001008965	-	65	95.238	ENSACAG00000014073	SNRPF	97	95.238	Anolis_carolinensis
ENSCGRG00001008965	-	55	84.507	ENSANAG00000020297	-	65	84.507	Aotus_nancymaae
ENSCGRG00001008965	-	58	92.000	ENSANAG00000032845	SNRPF	87	92.000	Aotus_nancymaae
ENSCGRG00001008965	-	58	66.216	ENSANAG00000025860	-	85	66.216	Aotus_nancymaae
ENSCGRG00001008965	-	57	90.541	ENSACLG00000016066	snrpf	87	90.541	Astatotilapia_calliptera
ENSCGRG00001008965	-	58	86.667	ENSAMXG00000007421	snrpf	87	86.667	Astyanax_mexicanus
ENSCGRG00001008965	-	61	85.897	ENSBTAG00000050012	-	93	85.333	Bos_taurus
ENSCGRG00001008965	-	58	92.000	ENSBTAG00000016271	SNRPF	87	92.000	Bos_taurus
ENSCGRG00001008965	-	61	68.354	WBGene00004918	snr-5	87	70.270	Caenorhabditis_elegans
ENSCGRG00001008965	-	58	92.000	ENSCJAG00000002705	-	87	92.000	Callithrix_jacchus
ENSCGRG00001008965	-	58	92.000	ENSCAFG00000006395	-	68	92.000	Canis_familiaris
ENSCGRG00001008965	-	57	84.932	ENSCAFG00000031151	-	87	85.333	Canis_familiaris
ENSCGRG00001008965	-	57	84.932	ENSCAFG00020010823	-	87	85.333	Canis_lupus_dingo
ENSCGRG00001008965	-	61	82.051	ENSCAFG00020013161	-	74	90.000	Canis_lupus_dingo
ENSCGRG00001008965	-	58	86.667	ENSTSYG00000036502	-	87	86.667	Carlito_syrichta
ENSCGRG00001008965	-	77	76.768	ENSTSYG00000031636	-	62	87.838	Carlito_syrichta
ENSCGRG00001008965	-	58	81.333	ENSTSYG00000030635	-	87	81.333	Carlito_syrichta
ENSCGRG00001008965	-	57	93.151	ENSCAPG00000007242	SNRPF	86	93.151	Cavia_aperea
ENSCGRG00001008965	-	58	92.000	ENSCPOG00000013898	SNRPF	87	92.000	Cavia_porcellus
ENSCGRG00001008965	-	67	91.860	ENSCCAG00000017356	-	87	92.000	Cebus_capucinus
ENSCGRG00001008965	-	74	76.842	ENSCCAG00000033627	-	70	82.022	Cebus_capucinus
ENSCGRG00001008965	-	58	92.000	ENSCCAG00000037378	-	87	92.000	Cebus_capucinus
ENSCGRG00001008965	-	57	93.151	ENSCLAG00000007200	SNRPF	87	92.000	Chinchilla_lanigera
ENSCGRG00001008965	-	58	92.000	ENSCSAG00000003602	-	61	92.000	Chlorocebus_sabaeus
ENSCGRG00001008965	-	50	90.625	ENSCHOG00000009392	SNRPF	100	90.625	Choloepus_hoffmanni
ENSCGRG00001008965	-	58	84.000	ENSCPBG00000006227	-	87	84.000	Chrysemys_picta_bellii
ENSCGRG00001008965	-	67	84.884	ENSCPBG00000026463	-	87	85.333	Chrysemys_picta_bellii
ENSCGRG00001008965	-	67	81.395	ENSCPBG00000001985	-	89	82.667	Chrysemys_picta_bellii
ENSCGRG00001008965	-	65	88.095	ENSCPBG00000024287	-	59	89.041	Chrysemys_picta_bellii
ENSCGRG00001008965	-	65	82.143	ENSCSAVG00000007498	-	83	83.562	Ciona_savignyi
ENSCGRG00001008965	-	62	100.000	ENSCGRG00000018878	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001008965	-	57	93.151	ENSCGRG00000000336	-	87	92.000	Cricetulus_griseus_crigri
ENSCGRG00001008965	-	57	89.041	ENSCSEG00000004748	snrpf	87	88.000	Cynoglossus_semilaevis
ENSCGRG00001008965	-	57	90.411	ENSCVAG00000000397	snrpf	58	90.411	Cyprinodon_variegatus
ENSCGRG00001008965	-	58	87.013	ENSDARG00000105037	snrpf	88	87.013	Danio_rerio
ENSCGRG00001008965	-	58	90.667	ENSDNOG00000048989	-	67	90.667	Dasypus_novemcinctus
ENSCGRG00001008965	-	58	78.667	ENSDNOG00000049373	-	65	78.667	Dasypus_novemcinctus
ENSCGRG00001008965	-	56	80.556	ENSDORG00000025351	-	100	80.556	Dipodomys_ordii
ENSCGRG00001008965	-	65	73.810	FBgn0000426	SmF	83	76.712	Drosophila_melanogaster
ENSCGRG00001008965	-	58	92.000	ENSETEG00000001558	-	87	92.000	Echinops_telfairi
ENSCGRG00001008965	-	72	64.516	ENSEBUG00000001793	-	72	82.090	Eptatretus_burgeri
ENSCGRG00001008965	-	58	92.000	ENSECAG00000019817	SNRPF	61	92.000	Equus_caballus
ENSCGRG00001008965	-	57	93.151	ENSEEUG00000013509	SNRPF	86	93.151	Erinaceus_europaeus
ENSCGRG00001008965	-	58	89.333	ENSELUG00000003121	RUXF	87	89.333	Esox_lucius
ENSCGRG00001008965	-	67	87.209	ENSELUG00000007737	RUXF	86	88.000	Esox_lucius
ENSCGRG00001008965	-	58	92.000	ENSFCAG00000029966	-	87	92.000	Felis_catus
ENSCGRG00001008965	-	58	69.333	ENSFCAG00000021942	-	87	69.333	Felis_catus
ENSCGRG00001008965	-	65	75.000	ENSFCAG00000031148	-	69	72.000	Felis_catus
ENSCGRG00001008965	-	57	93.151	ENSFALG00000010799	SNRPF	85	93.151	Ficedula_albicollis
ENSCGRG00001008965	-	58	92.000	ENSFDAG00000002831	-	87	92.000	Fukomys_damarensis
ENSCGRG00001008965	-	57	90.411	ENSFHEG00000003240	snrpf	64	90.411	Fundulus_heteroclitus
ENSCGRG00001008965	-	57	90.411	ENSGMOG00000007741	snrpf	86	90.411	Gadus_morhua
ENSCGRG00001008965	-	58	92.000	ENSGALG00000011409	SNRPF	87	92.000	Gallus_gallus
ENSCGRG00001008965	-	57	90.411	ENSGAFG00000016187	snrpf	84	90.411	Gambusia_affinis
ENSCGRG00001008965	-	57	89.041	ENSGACG00000020055	snrpf	86	89.041	Gasterosteus_aculeatus
ENSCGRG00001008965	-	54	78.261	ENSGAGG00000014132	-	83	78.261	Gopherus_agassizii
ENSCGRG00001008965	-	57	86.486	ENSGAGG00000012945	-	69	86.667	Gopherus_agassizii
ENSCGRG00001008965	-	61	84.810	ENSGAGG00000022991	-	80	86.765	Gopherus_agassizii
ENSCGRG00001008965	-	57	93.243	ENSGGOG00000001127	-	87	93.243	Gorilla_gorilla
ENSCGRG00001008965	-	61	70.513	ENSGGOG00000039564	-	90	68.919	Gorilla_gorilla
ENSCGRG00001008965	-	65	73.810	ENSGGOG00000039936	-	83	70.667	Gorilla_gorilla
ENSCGRG00001008965	-	58	92.000	ENSHGLG00000009108	SNRPF	87	92.000	Heterocephalus_glaber_female
ENSCGRG00001008965	-	58	90.667	ENSHGLG00000021172	-	87	90.667	Heterocephalus_glaber_female
ENSCGRG00001008965	-	57	93.151	ENSHGLG00100008103	-	86	93.151	Heterocephalus_glaber_male
ENSCGRG00001008965	-	58	90.667	ENSHGLG00100019596	-	87	90.667	Heterocephalus_glaber_male
ENSCGRG00001008965	-	57	90.541	ENSIPUG00000018994	snrpf	87	90.541	Ictalurus_punctatus
ENSCGRG00001008965	-	58	92.000	ENSSTOG00000010434	-	87	92.000	Ictidomys_tridecemlineatus
ENSCGRG00001008965	-	67	75.581	ENSJJAG00000004558	-	89	76.000	Jaculus_jaculus
ENSCGRG00001008965	-	52	86.567	ENSJJAG00000004828	-	86	87.500	Jaculus_jaculus
ENSCGRG00001008965	-	58	92.000	ENSJJAG00000011272	-	87	92.000	Jaculus_jaculus
ENSCGRG00001008965	-	67	80.233	ENSJJAG00000010502	-	89	81.333	Jaculus_jaculus
ENSCGRG00001008965	-	58	90.667	ENSKMAG00000013566	snrpf	87	90.667	Kryptolebias_marmoratus
ENSCGRG00001008965	-	58	88.000	ENSLBEG00000008800	snrpf	87	88.000	Labrus_bergylta
ENSCGRG00001008965	-	57	93.151	ENSLACG00000002456	-	62	93.151	Latimeria_chalumnae
ENSCGRG00001008965	-	58	86.667	ENSLOCG00000015744	snrpf	87	86.667	Lepisosteus_oculatus
ENSCGRG00001008965	-	57	93.151	ENSLAFG00000017426	SNRPF	85	93.151	Loxodonta_africana
ENSCGRG00001008965	-	57	89.189	ENSMAMG00000016593	snrpf	87	89.189	Mastacembelus_armatus
ENSCGRG00001008965	-	57	90.541	ENSMZEG00005014701	snrpf	87	90.541	Maylandia_zebra
ENSCGRG00001008965	-	57	93.151	ENSMGAG00000011453	-	66	93.151	Meleagris_gallopavo
ENSCGRG00001008965	-	65	71.084	ENSMAUG00000010289	-	86	70.833	Mesocricetus_auratus
ENSCGRG00001008965	-	58	88.000	ENSMAUG00000008799	-	87	88.000	Mesocricetus_auratus
ENSCGRG00001008965	-	58	86.667	ENSMICG00000030494	-	60	86.667	Microcebus_murinus
ENSCGRG00001008965	-	58	92.000	ENSMICG00000012153	-	87	92.000	Microcebus_murinus
ENSCGRG00001008965	-	53	79.104	ENSMOCG00000020220	-	87	79.104	Microtus_ochrogaster
ENSCGRG00001008965	-	71	77.778	ENSMOCG00000022166	-	98	76.667	Microtus_ochrogaster
ENSCGRG00001008965	-	58	92.000	ENSMOCG00000020437	Snrpf	87	92.000	Microtus_ochrogaster
ENSCGRG00001008965	-	57	89.041	ENSMMOG00000007127	snrpf	86	89.041	Mola_mola
ENSCGRG00001008965	-	58	92.000	ENSMODG00000008091	SNRPF	66	92.000	Monodelphis_domestica
ENSCGRG00001008965	-	57	90.541	ENSMALG00000012328	snrpf	87	90.541	Monopterus_albus
ENSCGRG00001008965	-	58	92.000	MGP_CAROLIEiJ_G0015735	-	87	92.000	Mus_caroli
ENSCGRG00001008965	-	58	92.000	ENSMUSG00000020018	Snrpf	87	92.000	Mus_musculus
ENSCGRG00001008965	-	58	92.000	MGP_PahariEiJ_G0031350	Snrpf	87	92.000	Mus_pahari
ENSCGRG00001008965	-	58	92.000	MGP_SPRETEiJ_G0016553	Snrpf	87	92.000	Mus_spretus
ENSCGRG00001008965	-	58	92.000	ENSMPUG00000007176	-	67	92.000	Mustela_putorius_furo
ENSCGRG00001008965	-	58	92.000	ENSMLUG00000027932	-	71	92.000	Myotis_lucifugus
ENSCGRG00001008965	-	58	92.000	ENSMLUG00000029201	-	71	92.000	Myotis_lucifugus
ENSCGRG00001008965	-	58	92.000	ENSMLUG00000026149	-	71	92.000	Myotis_lucifugus
ENSCGRG00001008965	-	57	93.151	ENSMLUG00000013577	-	86	93.151	Myotis_lucifugus
ENSCGRG00001008965	-	65	75.000	ENSMLUG00000026269	-	69	72.603	Myotis_lucifugus
ENSCGRG00001008965	-	58	92.000	ENSNGAG00000024292	-	87	92.000	Nannospalax_galili
ENSCGRG00001008965	-	57	90.411	ENSNBRG00000011682	snrpf	74	90.411	Neolamprologus_brichardi
ENSCGRG00001008965	-	57	65.753	ENSMEUG00000000671	SNRPF	86	65.753	Notamacropus_eugenii
ENSCGRG00001008965	-	57	93.243	ENSODEG00000010328	-	87	93.243	Octodon_degus
ENSCGRG00001008965	-	57	93.151	ENSOCUG00000010925	SNRPF	65	93.151	Oryctolagus_cuniculus
ENSCGRG00001008965	-	57	87.671	ENSORLG00020008216	snrpf	86	87.671	Oryzias_latipes_hni
ENSCGRG00001008965	-	57	87.671	ENSORLG00015007418	snrpf	86	87.671	Oryzias_latipes_hsok
ENSCGRG00001008965	-	57	89.189	ENSOMEG00000003018	snrpf	87	89.189	Oryzias_melastigma
ENSCGRG00001008965	-	58	92.000	ENSOGAG00000030323	-	87	92.000	Otolemur_garnettii
ENSCGRG00001008965	-	58	92.000	ENSOARG00000011853	-	65	92.000	Ovis_aries
ENSCGRG00001008965	-	65	73.810	ENSPPAG00000037544	-	83	70.667	Pan_paniscus
ENSCGRG00001008965	-	61	71.795	ENSPPAG00000037479	-	91	70.270	Pan_paniscus
ENSCGRG00001008965	-	65	73.810	ENSPPRG00000007449	-	77	73.333	Panthera_pardus
ENSCGRG00001008965	-	58	92.000	ENSPPRG00000005875	-	87	92.000	Panthera_pardus
ENSCGRG00001008965	-	58	92.000	ENSPTIG00000007520	SNRPF	87	92.000	Panthera_tigris_altaica
ENSCGRG00001008965	-	65	76.190	ENSPTIG00000005117	-	89	73.333	Panthera_tigris_altaica
ENSCGRG00001008965	-	61	71.795	ENSPTRG00000047717	-	91	70.270	Pan_troglodytes
ENSCGRG00001008965	-	65	73.810	ENSPTRG00000043814	-	83	70.667	Pan_troglodytes
ENSCGRG00001008965	-	57	90.411	ENSPKIG00000014784	snrpf	80	90.411	Paramormyrops_kingsleyae
ENSCGRG00001008965	-	57	93.151	ENSPSIG00000016462	SNRPF	85	93.151	Pelodiscus_sinensis
ENSCGRG00001008965	-	57	89.041	ENSPMGG00000023548	snrpf	86	89.041	Periophthalmus_magnuspinnatus
ENSCGRG00001008965	-	57	93.151	ENSPEMG00000023326	Snrpf	87	92.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001008965	-	57	90.541	ENSPLAG00000023932	snrpf	87	90.541	Poecilia_latipinna
ENSCGRG00001008965	-	57	90.541	ENSPMEG00000003377	snrpf	87	90.541	Poecilia_mexicana
ENSCGRG00001008965	-	57	89.189	ENSPREG00000022635	snrpf	85	89.189	Poecilia_reticulata
ENSCGRG00001008965	-	58	92.000	ENSPPYG00000004847	-	87	92.000	Pongo_abelii
ENSCGRG00001008965	-	58	92.000	ENSPCOG00000023833	-	87	92.000	Propithecus_coquereli
ENSCGRG00001008965	-	58	92.000	ENSPVAG00000009036	SNRPF	87	92.000	Pteropus_vampyrus
ENSCGRG00001008965	-	57	90.541	ENSPNYG00000021712	snrpf	87	90.541	Pundamilia_nyererei
ENSCGRG00001008965	-	57	89.189	ENSPNAG00000019117	snrpf	87	89.189	Pygocentrus_nattereri
ENSCGRG00001008965	-	58	92.000	ENSRNOG00000005556	Snrpf	87	92.000	Rattus_norvegicus
ENSCGRG00001008965	-	58	90.667	ENSRBIG00000030414	-	87	90.667	Rhinopithecus_bieti
ENSCGRG00001008965	-	58	90.667	ENSRROG00000021975	-	87	90.667	Rhinopithecus_roxellana
ENSCGRG00001008965	-	54	54.930	YPR182W	SMX3	83	54.930	Saccharomyces_cerevisiae
ENSCGRG00001008965	-	58	92.000	ENSSBOG00000036179	-	87	92.000	Saimiri_boliviensis_boliviensis
ENSCGRG00001008965	-	58	80.000	ENSSBOG00000032297	-	86	80.000	Saimiri_boliviensis_boliviensis
ENSCGRG00001008965	-	58	92.000	ENSSBOG00000012868	-	87	92.000	Saimiri_boliviensis_boliviensis
ENSCGRG00001008965	-	58	71.795	ENSSBOG00000027638	-	88	71.795	Saimiri_boliviensis_boliviensis
ENSCGRG00001008965	-	57	93.151	ENSSHAG00000012294	SNRPF	66	93.151	Sarcophilus_harrisii
ENSCGRG00001008965	-	57	89.041	ENSSMAG00000005533	snrpf	84	89.041	Scophthalmus_maximus
ENSCGRG00001008965	-	50	87.692	ENSSDUG00000016283	snrpf	77	87.692	Seriola_dumerili
ENSCGRG00001008965	-	61	72.152	ENSSLDG00000003885	-	89	75.342	Seriola_lalandi_dorsalis
ENSCGRG00001008965	-	58	89.333	ENSSLDG00000005119	snrpf	87	89.333	Seriola_lalandi_dorsalis
ENSCGRG00001008965	-	57	93.243	ENSSPUG00000014590	-	87	93.243	Sphenodon_punctatus
ENSCGRG00001008965	-	57	90.411	ENSSPAG00000003283	snrpf	83	90.411	Stegastes_partitus
ENSCGRG00001008965	-	58	92.000	ENSSSCG00000000895	SNRPF	87	92.000	Sus_scrofa
ENSCGRG00001008965	-	58	88.000	ENSTNIG00000012672	snrpf	87	88.000	Tetraodon_nigroviridis
ENSCGRG00001008965	-	58	65.333	ENSTTRG00000006070	SNRPF	87	65.333	Tursiops_truncatus
ENSCGRG00001008965	-	67	80.233	ENSUAMG00000001101	-	88	81.333	Ursus_americanus
ENSCGRG00001008965	-	58	92.000	ENSUAMG00000008176	-	87	92.000	Ursus_americanus
ENSCGRG00001008965	-	58	92.000	ENSUMAG00000003528	-	87	92.000	Ursus_maritimus
ENSCGRG00001008965	-	58	81.333	ENSUMAG00000006177	-	88	81.333	Ursus_maritimus
ENSCGRG00001008965	-	58	92.000	ENSVPAG00000008712	-	87	92.000	Vicugna_pacos
ENSCGRG00001008965	-	61	85.897	ENSVVUG00000023821	-	96	85.333	Vulpes_vulpes
ENSCGRG00001008965	-	57	66.667	ENSXETG00000021630	snrpf	86	66.667	Xenopus_tropicalis
ENSCGRG00001008965	-	57	90.411	ENSXCOG00000013860	snrpf	84	90.411	Xiphophorus_couchianus
ENSCGRG00001008965	-	57	90.541	ENSXMAG00000015448	snrpf	87	90.541	Xiphophorus_maculatus