EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001009256 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1217 bases
Position: chrscaffold_0:123044985-123046201
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001006813	G-patch	PF01585.23	6.2e-12	1	1
ENSCGRP00001006811	G-patch	PF01585.23	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001010754	-	1020	-	ENSCGRP00001006813	339 (aa)	-	-
ENSCGRT00001010751	-	1038	-	ENSCGRP00001006811	345 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001009256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001009256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001009256	-	100	74.568	ENSCGRG00001013842	Rbm17	100	76.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001009256	-	100	74.074	ENSG00000134453	RBM17	100	76.060	Homo_sapiens
ENSCGRG00001009256	-	99	64.764	ENSAPOG00000007101	rbm17	99	65.509	Acanthochromis_polyacanthus
ENSCGRG00001009256	-	100	73.827	ENSAMEG00000002107	RBM17	100	75.810	Ailuropoda_melanoleuca
ENSCGRG00001009256	-	100	62.500	ENSACIG00000006251	rbm17	100	64.706	Amphilophus_citrinellus
ENSCGRG00001009256	-	100	64.865	ENSAOCG00000014892	rbm17	100	65.602	Amphiprion_ocellaris
ENSCGRG00001009256	-	100	64.865	ENSAPEG00000022779	rbm17	100	65.602	Amphiprion_percula
ENSCGRG00001009256	-	100	61.758	ENSATEG00000004406	rbm17	100	62.945	Anabas_testudineus
ENSCGRG00001009256	-	100	71.358	ENSAPLG00000004190	RBM17	100	73.333	Anas_platyrhynchos
ENSCGRG00001009256	-	88	65.405	ENSACAG00000005418	RBM17	99	67.568	Anolis_carolinensis
ENSCGRG00001009256	-	100	71.318	ENSANAG00000019330	-	99	80.992	Aotus_nancymaae
ENSCGRG00001009256	-	100	73.827	ENSANAG00000030127	RBM17	98	83.471	Aotus_nancymaae
ENSCGRG00001009256	-	100	62.500	ENSACLG00000003928	rbm17	100	65.750	Astatotilapia_calliptera
ENSCGRG00001009256	-	100	61.538	ENSAMXG00000005853	rbm17	100	63.980	Astyanax_mexicanus
ENSCGRG00001009256	-	100	72.346	ENSBTAG00000011094	-	100	74.321	Bos_taurus
ENSCGRG00001009256	-	100	73.580	ENSBTAG00000021951	RBM17	100	75.561	Bos_taurus
ENSCGRG00001009256	-	69	30.855	WBGene00010233	F58B3.7	91	30.966	Caenorhabditis_elegans
ENSCGRG00001009256	-	100	73.827	ENSCJAG00000020573	RBM17	100	76.060	Callithrix_jacchus
ENSCGRG00001009256	-	100	73.827	ENSCAFG00000005206	RBM17	100	75.810	Canis_familiaris
ENSCGRG00001009256	-	100	72.796	ENSCAFG00020005420	RBM17	100	74.811	Canis_lupus_dingo
ENSCGRG00001009256	-	100	72.840	ENSCHIG00000019921	-	100	73.827	Capra_hircus
ENSCGRG00001009256	-	100	73.580	ENSCHIG00000023204	-	100	75.561	Capra_hircus
ENSCGRG00001009256	-	100	73.827	ENSTSYG00000001165	RBM17	97	86.087	Carlito_syrichta
ENSCGRG00001009256	-	88	67.751	ENSCAPG00000006275	RBM17	100	67.622	Cavia_aperea
ENSCGRG00001009256	-	100	74.093	ENSCPOG00000005679	RBM17	100	74.938	Cavia_porcellus
ENSCGRG00001009256	-	100	73.827	ENSCCAG00000018655	RBM17	98	83.471	Cebus_capucinus
ENSCGRG00001009256	-	100	74.074	ENSCATG00000041566	RBM17	97	84.167	Cercocebus_atys
ENSCGRG00001009256	-	100	74.321	ENSCLAG00000012195	RBM17	99	76.296	Chinchilla_lanigera
ENSCGRG00001009256	-	100	74.074	ENSCSAG00000013564	RBM17	100	76.060	Chlorocebus_sabaeus
ENSCGRG00001009256	-	91	56.417	ENSCHOG00000005131	RBM17	100	58.556	Choloepus_hoffmanni
ENSCGRG00001009256	-	100	70.896	ENSCPBG00000019836	RBM17	100	72.886	Chrysemys_picta_bellii
ENSCGRG00001009256	-	100	39.604	ENSCSAVG00000008782	-	100	41.687	Ciona_savignyi
ENSCGRG00001009256	-	100	74.074	ENSCANG00000030987	RBM17	97	84.167	Colobus_angolensis_palliatus
ENSCGRG00001009256	-	97	72.376	ENSCANG00000023715	-	100	73.481	Colobus_angolensis_palliatus
ENSCGRG00001009256	-	100	74.568	ENSCGRG00000006907	Rbm17	100	76.543	Cricetulus_griseus_crigri
ENSCGRG00001009256	-	100	61.139	ENSCSEG00000018164	rbm17	100	64.356	Cynoglossus_semilaevis
ENSCGRG00001009256	-	100	62.871	ENSCVAG00000002476	rbm17	100	63.119	Cyprinodon_variegatus
ENSCGRG00001009256	-	100	59.189	ENSDARG00000031346	rbm17	100	62.291	Danio_rerio
ENSCGRG00001009256	-	100	74.065	ENSDNOG00000035920	RBM17	100	76.060	Dasypus_novemcinctus
ENSCGRG00001009256	-	99	35.561	FBgn0086683	Spf45	99	35.772	Drosophila_melanogaster
ENSCGRG00001009256	-	100	57.606	ENSETEG00000006642	RBM17	100	58.765	Echinops_telfairi
ENSCGRG00001009256	-	100	41.783	ENSEBUG00000010253	rbm17	99	41.783	Eptatretus_burgeri
ENSCGRG00001009256	-	91	72.460	ENSEASG00005009236	-	100	72.460	Equus_asinus_asinus
ENSCGRG00001009256	-	100	73.902	ENSEASG00005019205	-	100	74.623	Equus_asinus_asinus
ENSCGRG00001009256	-	100	68.766	ENSECAG00000001379	-	100	69.773	Equus_caballus
ENSCGRG00001009256	-	100	68.602	ENSECAG00000008939	RBM17	100	69.191	Equus_caballus
ENSCGRG00001009256	-	83	56.418	ENSEEUG00000013077	RBM17	98	59.104	Erinaceus_europaeus
ENSCGRG00001009256	-	100	60.140	ENSELUG00000006440	rbm17	100	60.839	Esox_lucius
ENSCGRG00001009256	-	100	73.827	ENSFCAG00000031988	RBM17	100	75.810	Felis_catus
ENSCGRG00001009256	-	100	70.823	ENSFALG00000001790	RBM17	100	72.818	Ficedula_albicollis
ENSCGRG00001009256	-	100	74.321	ENSFDAG00000007470	RBM17	100	76.296	Fukomys_damarensis
ENSCGRG00001009256	-	100	60.553	ENSFHEG00000001266	rbm17	100	66.154	Fundulus_heteroclitus
ENSCGRG00001009256	-	99	59.903	ENSGMOG00000008438	rbm17	100	60.386	Gadus_morhua
ENSCGRG00001009256	-	100	71.111	ENSGALG00000006332	RBM17	100	73.086	Gallus_gallus
ENSCGRG00001009256	-	100	61.179	ENSGAFG00000019879	rbm17	100	64.865	Gambusia_affinis
ENSCGRG00001009256	-	99	64.198	ENSGACG00000019174	rbm17	99	64.198	Gasterosteus_aculeatus
ENSCGRG00001009256	-	100	70.896	ENSGAGG00000019906	RBM17	100	72.886	Gopherus_agassizii
ENSCGRG00001009256	-	100	65.025	ENSHBUG00000016624	rbm17	100	66.256	Haplochromis_burtoni
ENSCGRG00001009256	-	100	74.321	ENSHGLG00000011580	RBM17	100	76.296	Heterocephalus_glaber_female
ENSCGRG00001009256	-	100	74.321	ENSHGLG00100010460	RBM17	100	76.296	Heterocephalus_glaber_male
ENSCGRG00001009256	-	100	67.308	ENSHGLG00100010556	-	100	67.308	Heterocephalus_glaber_male
ENSCGRG00001009256	-	99	61.298	ENSHCOG00000010865	rbm17	100	62.260	Hippocampus_comes
ENSCGRG00001009256	-	62	61.603	ENSIPUG00000007699	Rbm17	100	63.750	Ictalurus_punctatus
ENSCGRG00001009256	-	100	74.815	ENSSTOG00000013591	RBM17	100	76.790	Ictidomys_tridecemlineatus
ENSCGRG00001009256	-	100	57.584	ENSJJAG00000000993	-	100	57.584	Jaculus_jaculus
ENSCGRG00001009256	-	100	74.568	ENSJJAG00000022886	Rbm17	100	76.543	Jaculus_jaculus
ENSCGRG00001009256	-	100	61.481	ENSKMAG00000021400	rbm17	100	64.286	Kryptolebias_marmoratus
ENSCGRG00001009256	-	100	64.373	ENSLBEG00000000881	rbm17	100	62.945	Labrus_bergylta
ENSCGRG00001009256	-	99	53.682	ENSLACG00000017297	RBM17	99	55.107	Latimeria_chalumnae
ENSCGRG00001009256	-	100	67.654	ENSLOCG00000015659	rbm17	100	68.395	Lepisosteus_oculatus
ENSCGRG00001009256	-	100	73.956	ENSLAFG00000011629	RBM17	100	75.921	Loxodonta_africana
ENSCGRG00001009256	-	100	74.074	ENSMFAG00000035521	RBM17	97	84.167	Macaca_fascicularis
ENSCGRG00001009256	-	100	74.074	ENSMMUG00000015152	RBM17	97	84.167	Macaca_mulatta
ENSCGRG00001009256	-	100	74.074	ENSMNEG00000017264	RBM17	97	84.167	Macaca_nemestrina
ENSCGRG00001009256	-	100	74.074	ENSMLEG00000029340	RBM17	97	84.167	Mandrillus_leucophaeus
ENSCGRG00001009256	-	100	64.524	ENSMAMG00000000387	rbm17	100	64.267	Mastacembelus_armatus
ENSCGRG00001009256	-	100	63.397	ENSMZEG00005015179	rbm17	100	65.750	Maylandia_zebra
ENSCGRG00001009256	-	100	70.588	ENSMGAG00000003981	RBM17	100	72.549	Meleagris_gallopavo
ENSCGRG00001009256	-	100	74.568	ENSMAUG00000019247	Rbm17	100	76.543	Mesocricetus_auratus
ENSCGRG00001009256	-	100	68.215	ENSMICG00000041489	-	100	69.927	Microcebus_murinus
ENSCGRG00001009256	-	100	74.074	ENSMICG00000003976	-	100	75.062	Microcebus_murinus
ENSCGRG00001009256	-	100	74.568	ENSMOCG00000011847	Rbm17	100	76.543	Microtus_ochrogaster
ENSCGRG00001009256	-	91	62.022	ENSMOCG00000014517	-	99	63.014	Microtus_ochrogaster
ENSCGRG00001009256	-	100	58.495	ENSMMOG00000010264	rbm17	100	59.223	Mola_mola
ENSCGRG00001009256	-	100	73.086	ENSMODG00000016648	RBM17	100	75.062	Monodelphis_domestica
ENSCGRG00001009256	-	100	63.158	ENSMALG00000010597	rbm17	100	66.240	Monopterus_albus
ENSCGRG00001009256	-	100	74.074	MGP_CAROLIEiJ_G0023173	Rbm17	100	76.049	Mus_caroli
ENSCGRG00001009256	-	100	74.074	ENSMUSG00000037197	Rbm17	100	76.049	Mus_musculus
ENSCGRG00001009256	-	100	74.568	MGP_PahariEiJ_G0019233	Rbm17	100	76.543	Mus_pahari
ENSCGRG00001009256	-	100	74.074	MGP_SPRETEiJ_G0024091	Rbm17	100	76.049	Mus_spretus
ENSCGRG00001009256	-	83	72.059	ENSMPUG00000016359	RBM17	94	74.412	Mustela_putorius_furo
ENSCGRG00001009256	-	100	73.153	ENSMLUG00000002302	-	100	75.123	Myotis_lucifugus
ENSCGRG00001009256	-	100	70.000	ENSMLUG00000025709	-	100	71.000	Myotis_lucifugus
ENSCGRG00001009256	-	100	74.568	ENSNGAG00000000741	Rbm17	100	76.543	Nannospalax_galili
ENSCGRG00001009256	-	100	58.730	ENSNGAG00000000663	-	100	58.730	Nannospalax_galili
ENSCGRG00001009256	-	100	63.476	ENSNBRG00000018148	rbm17	100	66.324	Neolamprologus_brichardi
ENSCGRG00001009256	-	100	74.074	ENSNLEG00000033350	RBM17	98	83.471	Nomascus_leucogenys
ENSCGRG00001009256	-	100	67.901	ENSMEUG00000011347	RBM17	100	69.877	Notamacropus_eugenii
ENSCGRG00001009256	-	100	66.832	ENSOPRG00000002993	RBM17	100	67.822	Ochotona_princeps
ENSCGRG00001009256	-	100	73.892	ENSODEG00000004393	RBM17	100	75.862	Octodon_degus
ENSCGRG00001009256	-	97	58.377	ENSODEG00000007286	-	99	58.377	Octodon_degus
ENSCGRG00001009256	-	100	64.303	ENSONIG00000011838	rbm17	100	65.526	Oreochromis_niloticus
ENSCGRG00001009256	-	100	71.960	ENSOANG00000015455	RBM17	100	74.938	Ornithorhynchus_anatinus
ENSCGRG00001009256	-	100	62.708	ENSORLG00000028798	rbm17	100	65.586	Oryzias_latipes
ENSCGRG00001009256	-	100	63.819	ENSORLG00020004593	rbm17	100	67.179	Oryzias_latipes_hni
ENSCGRG00001009256	-	100	65.356	ENSORLG00015000033	rbm17	100	66.339	Oryzias_latipes_hsok
ENSCGRG00001009256	-	100	63.183	ENSOMEG00000012060	rbm17	100	78.344	Oryzias_melastigma
ENSCGRG00001009256	-	100	73.827	ENSOGAG00000015687	RBM17	100	75.802	Otolemur_garnettii
ENSCGRG00001009256	-	100	73.580	ENSOARG00000012975	RBM17	100	75.561	Ovis_aries
ENSCGRG00001009256	-	100	74.074	ENSPPAG00000032347	RBM17	98	83.471	Pan_paniscus
ENSCGRG00001009256	-	100	73.827	ENSPPRG00000010706	RBM17	100	75.810	Panthera_pardus
ENSCGRG00001009256	-	100	73.827	ENSPTIG00000007596	RBM17	100	75.810	Panthera_tigris_altaica
ENSCGRG00001009256	-	100	74.074	ENSPTRG00000002265	RBM17	98	83.471	Pan_troglodytes
ENSCGRG00001009256	-	100	74.074	ENSPANG00000023425	RBM17	97	84.167	Papio_anubis
ENSCGRG00001009256	-	100	62.353	ENSPKIG00000025526	rbm17	100	62.439	Paramormyrops_kingsleyae
ENSCGRG00001009256	-	100	59.950	ENSPKIG00000005048	-	100	61.596	Paramormyrops_kingsleyae
ENSCGRG00001009256	-	100	70.123	ENSPSIG00000012332	RBM17	100	72.099	Pelodiscus_sinensis
ENSCGRG00001009256	-	100	62.287	ENSPMGG00000007980	rbm17	100	64.216	Periophthalmus_magnuspinnatus
ENSCGRG00001009256	-	100	74.568	ENSPEMG00000014320	Rbm17	100	76.543	Peromyscus_maniculatus_bairdii
ENSCGRG00001009256	-	100	72.973	ENSPCIG00000019260	-	100	74.939	Phascolarctos_cinereus
ENSCGRG00001009256	-	100	60.095	ENSPFOG00000013271	rbm17	100	63.420	Poecilia_formosa
ENSCGRG00001009256	-	100	62.469	ENSPLAG00000004455	rbm17	100	65.578	Poecilia_latipinna
ENSCGRG00001009256	-	100	61.916	ENSPMEG00000014864	rbm17	100	65.356	Poecilia_mexicana
ENSCGRG00001009256	-	100	61.042	ENSPREG00000015589	rbm17	100	65.823	Poecilia_reticulata
ENSCGRG00001009256	-	80	55.625	ENSPPYG00000019042	-	100	56.688	Pongo_abelii
ENSCGRG00001009256	-	99	56.010	ENSPPYG00000019881	-	100	58.568	Pongo_abelii
ENSCGRG00001009256	-	100	74.074	ENSPPYG00000002067	RBM17	100	76.060	Pongo_abelii
ENSCGRG00001009256	-	100	68.395	ENSPCAG00000016879	RBM17	100	70.370	Procavia_capensis
ENSCGRG00001009256	-	100	73.580	ENSPCOG00000027881	RBM17	100	75.561	Propithecus_coquereli
ENSCGRG00001009256	-	100	66.917	ENSPVAG00000015499	RBM17	100	67.920	Pteropus_vampyrus
ENSCGRG00001009256	-	100	67.292	ENSPNYG00000015274	rbm17	100	68.097	Pundamilia_nyererei
ENSCGRG00001009256	-	61	65.471	ENSPNAG00000030046	rbm17	100	64.179	Pygocentrus_nattereri
ENSCGRG00001009256	-	100	74.568	ENSRNOG00000018767	Rbm17	100	76.543	Rattus_norvegicus
ENSCGRG00001009256	-	100	74.074	ENSRBIG00000043727	RBM17	97	84.167	Rhinopithecus_bieti
ENSCGRG00001009256	-	100	74.074	ENSRROG00000044142	RBM17	97	84.167	Rhinopithecus_roxellana
ENSCGRG00001009256	-	100	73.580	ENSSBOG00000031661	-	93	85.217	Saimiri_boliviensis_boliviensis
ENSCGRG00001009256	-	100	69.849	ENSSBOG00000023653	-	100	70.603	Saimiri_boliviensis_boliviensis
ENSCGRG00001009256	-	100	73.153	ENSSHAG00000012480	-	100	75.123	Sarcophilus_harrisii
ENSCGRG00001009256	-	100	62.927	ENSSFOG00015009892	rbm17	100	63.659	Scleropages_formosus
ENSCGRG00001009256	-	100	63.224	ENSSMAG00000012368	rbm17	100	65.553	Scophthalmus_maximus
ENSCGRG00001009256	-	100	64.962	ENSSDUG00000015015	rbm17	100	66.667	Seriola_dumerili
ENSCGRG00001009256	-	100	64.962	ENSSLDG00000014486	rbm17	100	66.667	Seriola_lalandi_dorsalis
ENSCGRG00001009256	-	99	71.072	ENSSPUG00000001036	RBM17	99	73.067	Sphenodon_punctatus
ENSCGRG00001009256	-	100	64.619	ENSSPAG00000002338	rbm17	100	65.500	Stegastes_partitus
ENSCGRG00001009256	-	100	73.580	ENSSSCG00000011134	RBM17	100	75.561	Sus_scrofa
ENSCGRG00001009256	-	100	70.617	ENSTGUG00000002013	RBM17	100	72.593	Taeniopygia_guttata
ENSCGRG00001009256	-	100	63.882	ENSTRUG00000010698	rbm17	100	64.619	Takifugu_rubripes
ENSCGRG00001009256	-	100	65.111	ENSTNIG00000006892	rbm17	100	65.848	Tetraodon_nigroviridis
ENSCGRG00001009256	-	86	96.970	ENSTBEG00000014686	RBM17	86	96.970	Tupaia_belangeri
ENSCGRG00001009256	-	88	71.154	ENSTTRG00000001344	RBM17	100	73.352	Tursiops_truncatus
ENSCGRG00001009256	-	100	72.796	ENSUAMG00000009499	RBM17	100	74.811	Ursus_americanus
ENSCGRG00001009256	-	100	73.580	ENSUMAG00000012237	RBM17	100	75.561	Ursus_maritimus
ENSCGRG00001009256	-	100	65.432	ENSVPAG00000005497	RBM17	100	65.432	Vicugna_pacos
ENSCGRG00001009256	-	100	72.796	ENSVVUG00000006780	RBM17	100	74.811	Vulpes_vulpes
ENSCGRG00001009256	-	99	65.423	ENSXETG00000018123	rbm17	100	66.418	Xenopus_tropicalis
ENSCGRG00001009256	-	100	62.245	ENSXMAG00000008674	rbm17	100	66.071	Xiphophorus_maculatus