EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001009525 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 32293 bases
Position: chrscaffold_1:148083713-148116005
Accession: 100756776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001007061	SRP54	PF00448.22	3.9e-78	1	1
ENSCGRP00001007061	SRP54_N	PF02881.19	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001011064	-	2091	XM_016980133	ENSCGRP00001007061	504 (aa)	XP_003511430	UPI0004548F23

Gene Model

Click here to download ENSCGRG00001009525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001009525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001009525	-	100	99.603	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSCGRG00001009525	-	100	95.833	ENSAPOG00000011314	srp54	100	95.833	Acanthochromis_polyacanthus
ENSCGRG00001009525	-	100	99.603	ENSAMEG00000015544	SRP54	100	99.603	Ailuropoda_melanoleuca
ENSCGRG00001009525	-	89	95.100	ENSACIG00000022831	srp54	97	95.100	Amphilophus_citrinellus
ENSCGRG00001009525	-	100	95.833	ENSAOCG00000019401	srp54	100	95.833	Amphiprion_ocellaris
ENSCGRG00001009525	-	100	95.833	ENSAPEG00000001977	srp54	100	95.833	Amphiprion_percula
ENSCGRG00001009525	-	100	96.230	ENSATEG00000013877	srp54	100	96.230	Anabas_testudineus
ENSCGRG00001009525	-	94	98.312	ENSAPLG00000010125	SRP54	95	98.312	Anas_platyrhynchos
ENSCGRG00001009525	-	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSCGRG00001009525	-	86	95.161	ENSACAG00000010631	-	100	95.161	Anolis_carolinensis
ENSCGRG00001009525	-	100	98.214	ENSACAG00000002103	-	100	98.214	Anolis_carolinensis
ENSCGRG00001009525	-	100	99.603	ENSANAG00000022133	SRP54	100	99.603	Aotus_nancymaae
ENSCGRG00001009525	-	100	96.032	ENSACLG00000015866	srp54	100	96.032	Astatotilapia_calliptera
ENSCGRG00001009525	-	100	96.032	ENSAMXG00000032669	SRP54	100	96.032	Astyanax_mexicanus
ENSCGRG00001009525	-	100	99.603	ENSBTAG00000019085	SRP54	100	99.603	Bos_taurus
ENSCGRG00001009525	-	98	71.687	WBGene00009012	F21D5.7	100	71.687	Caenorhabditis_elegans
ENSCGRG00001009525	-	100	99.603	ENSCJAG00000006581	SRP54	100	99.603	Callithrix_jacchus
ENSCGRG00001009525	-	100	99.603	ENSCAFG00000013331	SRP54	100	99.603	Canis_familiaris
ENSCGRG00001009525	-	100	99.603	ENSCAFG00020023427	SRP54	100	99.603	Canis_lupus_dingo
ENSCGRG00001009525	-	100	99.603	ENSCHIG00000026345	SRP54	100	99.603	Capra_hircus
ENSCGRG00001009525	-	100	99.405	ENSTSYG00000002680	-	100	99.405	Carlito_syrichta
ENSCGRG00001009525	-	94	88.211	ENSTSYG00000035333	-	93	88.211	Carlito_syrichta
ENSCGRG00001009525	-	94	64.082	ENSCAPG00000008780	SRP54	100	64.082	Cavia_aperea
ENSCGRG00001009525	-	100	99.206	ENSCPOG00000003691	SRP54	100	99.206	Cavia_porcellus
ENSCGRG00001009525	-	90	99.286	ENSCCAG00000024179	SRP54	100	99.523	Cebus_capucinus
ENSCGRG00001009525	-	100	99.603	ENSCATG00000034083	SRP54	100	99.603	Cercocebus_atys
ENSCGRG00001009525	-	100	99.603	ENSCLAG00000015076	SRP54	100	99.603	Chinchilla_lanigera
ENSCGRG00001009525	-	100	99.603	ENSCSAG00000015575	SRP54	100	99.603	Chlorocebus_sabaeus
ENSCGRG00001009525	-	95	87.734	ENSCHOG00000008986	SRP54	100	87.734	Choloepus_hoffmanni
ENSCGRG00001009525	-	100	98.810	ENSCPBG00000026195	SRP54	100	98.810	Chrysemys_picta_bellii
ENSCGRG00001009525	-	100	81.548	ENSCING00000007380	-	100	81.548	Ciona_intestinalis
ENSCGRG00001009525	-	100	99.603	ENSCANG00000028532	SRP54	100	99.603	Colobus_angolensis_palliatus
ENSCGRG00001009525	-	76	100.000	ENSCGRG00000009453	-	89	100.000	Cricetulus_griseus_crigri
ENSCGRG00001009525	-	100	95.040	ENSCSEG00000012392	srp54	100	95.040	Cynoglossus_semilaevis
ENSCGRG00001009525	-	100	95.833	ENSCVAG00000010395	srp54	100	95.833	Cyprinodon_variegatus
ENSCGRG00001009525	-	100	96.032	ENSDARG00000098367	srp54	100	96.032	Danio_rerio
ENSCGRG00001009525	-	100	99.603	ENSDNOG00000032525	SRP54	100	99.603	Dasypus_novemcinctus
ENSCGRG00001009525	-	89	85.045	ENSDORG00000005159	-	97	85.045	Dipodomys_ordii
ENSCGRG00001009525	-	96	77.938	FBgn0010747	Srp54k	98	77.510	Drosophila_melanogaster
ENSCGRG00001009525	-	100	98.810	ENSETEG00000016307	-	100	98.810	Echinops_telfairi
ENSCGRG00001009525	-	83	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSCGRG00001009525	-	100	87.500	ENSEBUG00000009437	-	100	87.500	Eptatretus_burgeri
ENSCGRG00001009525	-	100	99.603	ENSEASG00005002057	SRP54	100	99.603	Equus_asinus_asinus
ENSCGRG00001009525	-	99	99.398	ENSECAG00000018042	SRP54	98	99.398	Equus_caballus
ENSCGRG00001009525	-	100	83.333	ENSEEUG00000001511	SRP54	100	83.333	Erinaceus_europaeus
ENSCGRG00001009525	-	100	95.238	ENSELUG00000003395	srp54	100	95.238	Esox_lucius
ENSCGRG00001009525	-	100	99.802	ENSFCAG00000032033	SRP54	100	99.802	Felis_catus
ENSCGRG00001009525	-	100	98.413	ENSFALG00000005995	SRP54	100	98.413	Ficedula_albicollis
ENSCGRG00001009525	-	100	99.603	ENSFDAG00000016767	SRP54	100	99.603	Fukomys_damarensis
ENSCGRG00001009525	-	100	95.437	ENSFHEG00000004263	srp54	100	95.437	Fundulus_heteroclitus
ENSCGRG00001009525	-	95	89.958	ENSGMOG00000011391	srp54	100	89.958	Gadus_morhua
ENSCGRG00001009525	-	100	98.413	ENSGALG00000023135	SRP54	100	98.413	Gallus_gallus
ENSCGRG00001009525	-	100	96.032	ENSGAFG00000011586	srp54	100	96.032	Gambusia_affinis
ENSCGRG00001009525	-	100	95.437	ENSGACG00000004181	srp54	100	95.437	Gasterosteus_aculeatus
ENSCGRG00001009525	-	100	98.810	ENSGAGG00000014766	SRP54	100	98.810	Gopherus_agassizii
ENSCGRG00001009525	-	100	99.603	ENSGGOG00000002926	SRP54	100	99.603	Gorilla_gorilla
ENSCGRG00001009525	-	100	96.032	ENSHBUG00000005678	srp54	100	96.032	Haplochromis_burtoni
ENSCGRG00001009525	-	100	99.603	ENSHGLG00000002850	SRP54	100	99.603	Heterocephalus_glaber_female
ENSCGRG00001009525	-	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSCGRG00001009525	-	100	99.603	ENSHGLG00100005263	SRP54	100	99.603	Heterocephalus_glaber_male
ENSCGRG00001009525	-	100	94.444	ENSHCOG00000021127	srp54	100	94.444	Hippocampus_comes
ENSCGRG00001009525	-	100	95.238	ENSIPUG00000001420	srp54	100	95.238	Ictalurus_punctatus
ENSCGRG00001009525	-	100	99.603	ENSSTOG00000016023	SRP54	100	99.603	Ictidomys_tridecemlineatus
ENSCGRG00001009525	-	87	76.591	ENSJJAG00000016404	-	100	76.591	Jaculus_jaculus
ENSCGRG00001009525	-	100	94.841	ENSJJAG00000013417	-	100	94.841	Jaculus_jaculus
ENSCGRG00001009525	-	100	95.437	ENSKMAG00000007707	srp54	100	95.437	Kryptolebias_marmoratus
ENSCGRG00001009525	-	100	95.833	ENSLBEG00000021122	srp54	100	95.833	Labrus_bergylta
ENSCGRG00001009525	-	100	95.833	ENSLBEG00000018690	srp54	100	95.833	Labrus_bergylta
ENSCGRG00001009525	-	100	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSCGRG00001009525	-	100	96.825	ENSLOCG00000009440	srp54	100	96.825	Lepisosteus_oculatus
ENSCGRG00001009525	-	100	99.603	ENSLAFG00000012007	SRP54	100	99.603	Loxodonta_africana
ENSCGRG00001009525	-	100	99.603	ENSMFAG00000044371	SRP54	100	99.603	Macaca_fascicularis
ENSCGRG00001009525	-	100	99.603	ENSMMUG00000015073	FAM177A1	100	99.603	Macaca_mulatta
ENSCGRG00001009525	-	100	99.603	ENSMNEG00000006947	SRP54	100	99.603	Macaca_nemestrina
ENSCGRG00001009525	-	100	99.603	ENSMLEG00000042251	SRP54	100	99.603	Mandrillus_leucophaeus
ENSCGRG00001009525	-	100	96.032	ENSMAMG00000004803	srp54	100	96.032	Mastacembelus_armatus
ENSCGRG00001009525	-	100	96.032	ENSMZEG00005027528	srp54	100	96.032	Maylandia_zebra
ENSCGRG00001009525	-	100	93.676	ENSMGAG00000012481	SRP54	100	93.676	Meleagris_gallopavo
ENSCGRG00001009525	-	100	99.802	ENSMAUG00000014447	-	100	99.802	Mesocricetus_auratus
ENSCGRG00001009525	-	100	99.603	ENSMICG00000010270	SRP54	100	99.603	Microcebus_murinus
ENSCGRG00001009525	-	87	99.773	ENSMOCG00000000948	-	100	99.773	Microtus_ochrogaster
ENSCGRG00001009525	-	89	94.183	ENSMMOG00000020303	srp54	98	94.183	Mola_mola
ENSCGRG00001009525	-	100	99.405	ENSMODG00000023150	-	100	99.405	Monodelphis_domestica
ENSCGRG00001009525	-	100	99.405	ENSMODG00000012925	-	100	99.405	Monodelphis_domestica
ENSCGRG00001009525	-	89	94.643	ENSMALG00000009163	srp54	99	94.643	Monopterus_albus
ENSCGRG00001009525	-	100	99.802	MGP_CAROLIEiJ_G0017754	-	100	99.802	Mus_caroli
ENSCGRG00001009525	-	100	99.802	ENSMUSG00000112449	Srp54b	100	99.802	Mus_musculus
ENSCGRG00001009525	-	100	99.008	ENSMUSG00000079108	Srp54c	100	99.008	Mus_musculus
ENSCGRG00001009525	-	100	99.802	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSCGRG00001009525	-	100	99.802	MGP_PahariEiJ_G0029510	-	100	99.802	Mus_pahari
ENSCGRG00001009525	-	100	99.603	ENSMPUG00000016302	SRP54	100	99.603	Mustela_putorius_furo
ENSCGRG00001009525	-	100	99.008	ENSMLUG00000008958	SRP54	100	99.008	Myotis_lucifugus
ENSCGRG00001009525	-	100	89.881	ENSNGAG00000019806	-	100	89.881	Nannospalax_galili
ENSCGRG00001009525	-	87	95.682	ENSNBRG00000006000	srp54	100	95.682	Neolamprologus_brichardi
ENSCGRG00001009525	-	100	99.603	ENSNLEG00000003496	SRP54	100	99.603	Nomascus_leucogenys
ENSCGRG00001009525	-	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSCGRG00001009525	-	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSCGRG00001009525	-	100	99.603	ENSODEG00000004865	SRP54	100	99.603	Octodon_degus
ENSCGRG00001009525	-	100	96.032	ENSONIG00000011768	srp54	100	96.032	Oreochromis_niloticus
ENSCGRG00001009525	-	100	99.603	ENSOANG00000014051	SRP54	100	99.603	Ornithorhynchus_anatinus
ENSCGRG00001009525	-	100	99.008	ENSOCUG00000007838	SRP54	100	99.008	Oryctolagus_cuniculus
ENSCGRG00001009525	-	100	95.833	ENSORLG00000010027	srp54	100	95.833	Oryzias_latipes
ENSCGRG00001009525	-	100	95.833	ENSORLG00020001878	srp54	100	95.833	Oryzias_latipes_hni
ENSCGRG00001009525	-	100	95.833	ENSORLG00015021866	srp54	100	95.833	Oryzias_latipes_hsok
ENSCGRG00001009525	-	100	96.032	ENSOMEG00000020952	srp54	100	96.032	Oryzias_melastigma
ENSCGRG00001009525	-	100	99.603	ENSOGAG00000012188	SRP54	100	99.603	Otolemur_garnettii
ENSCGRG00001009525	-	100	99.603	ENSOARG00000007160	SRP54	100	99.603	Ovis_aries
ENSCGRG00001009525	-	100	99.603	ENSPPAG00000017434	SRP54	100	99.603	Pan_paniscus
ENSCGRG00001009525	-	100	98.810	ENSPPRG00000014047	SRP54	100	98.810	Panthera_pardus
ENSCGRG00001009525	-	100	99.802	ENSPTIG00000000744	SRP54	96	99.802	Panthera_tigris_altaica
ENSCGRG00001009525	-	100	99.603	ENSPTRG00000006259	FAM177A1	100	99.603	Pan_troglodytes
ENSCGRG00001009525	-	100	99.603	ENSPANG00000023853	SRP54	100	99.603	Papio_anubis
ENSCGRG00001009525	-	100	95.635	ENSPKIG00000001953	srp54	100	95.635	Paramormyrops_kingsleyae
ENSCGRG00001009525	-	100	98.611	ENSPSIG00000006476	SRP54	100	98.611	Pelodiscus_sinensis
ENSCGRG00001009525	-	91	93.043	ENSPMGG00000004127	srp54	99	93.043	Periophthalmus_magnuspinnatus
ENSCGRG00001009525	-	100	86.905	ENSPEMG00000019634	-	100	86.905	Peromyscus_maniculatus_bairdii
ENSCGRG00001009525	-	100	89.087	ENSPMAG00000006078	-	100	89.087	Petromyzon_marinus
ENSCGRG00001009525	-	100	99.405	ENSPCIG00000016175	SRP54	100	99.405	Phascolarctos_cinereus
ENSCGRG00001009525	-	100	96.032	ENSPFOG00000008870	srp54	100	96.032	Poecilia_formosa
ENSCGRG00001009525	-	100	96.032	ENSPLAG00000009889	srp54	100	96.032	Poecilia_latipinna
ENSCGRG00001009525	-	100	96.032	ENSPMEG00000008601	srp54	100	96.032	Poecilia_mexicana
ENSCGRG00001009525	-	100	96.032	ENSPREG00000004505	srp54	100	96.032	Poecilia_reticulata
ENSCGRG00001009525	-	100	94.444	ENSPPYG00000005739	SRP54	100	94.444	Pongo_abelii
ENSCGRG00001009525	-	100	95.635	ENSPCAG00000006268	SRP54	100	95.635	Procavia_capensis
ENSCGRG00001009525	-	100	97.624	ENSPCOG00000022473	SRP54	100	97.624	Propithecus_coquereli
ENSCGRG00001009525	-	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSCGRG00001009525	-	100	96.032	ENSPNYG00000009717	srp54	100	96.032	Pundamilia_nyererei
ENSCGRG00001009525	-	100	95.833	ENSPNAG00000008544	srp54	100	95.833	Pygocentrus_nattereri
ENSCGRG00001009525	-	100	99.603	ENSRNOG00000032776	Srp54a	100	99.603	Rattus_norvegicus
ENSCGRG00001009525	-	100	99.603	ENSRROG00000041292	SRP54	100	99.603	Rhinopithecus_roxellana
ENSCGRG00001009525	-	86	53.288	YPR088C	SRP54	95	48.467	Saccharomyces_cerevisiae
ENSCGRG00001009525	-	94	99.578	ENSSBOG00000035145	SRP54	100	99.578	Saimiri_boliviensis_boliviensis
ENSCGRG00001009525	-	68	99.417	ENSSHAG00000000671	SRP54	100	99.417	Sarcophilus_harrisii
ENSCGRG00001009525	-	100	96.230	ENSSFOG00015013920	srp54	100	96.230	Scleropages_formosus
ENSCGRG00001009525	-	100	89.888	ENSSMAG00000002441	srp54	100	89.888	Scophthalmus_maximus
ENSCGRG00001009525	-	100	96.032	ENSSDUG00000018586	srp54	100	96.032	Seriola_dumerili
ENSCGRG00001009525	-	100	95.833	ENSSLDG00000010476	srp54	100	95.833	Seriola_lalandi_dorsalis
ENSCGRG00001009525	-	100	99.603	ENSSARG00000002744	SRP54	100	99.603	Sorex_araneus
ENSCGRG00001009525	-	100	98.810	ENSSPUG00000013101	SRP54	100	98.810	Sphenodon_punctatus
ENSCGRG00001009525	-	100	95.833	ENSSPAG00000002354	srp54	100	95.833	Stegastes_partitus
ENSCGRG00001009525	-	100	99.603	ENSSSCG00000001955	SRP54	100	99.603	Sus_scrofa
ENSCGRG00001009525	-	94	98.312	ENSTGUG00000011945	-	95	98.312	Taeniopygia_guttata
ENSCGRG00001009525	-	100	95.437	ENSTRUG00000007057	srp54	100	95.437	Takifugu_rubripes
ENSCGRG00001009525	-	100	95.040	ENSTNIG00000002589	srp54	100	95.040	Tetraodon_nigroviridis
ENSCGRG00001009525	-	89	91.051	ENSTBEG00000011409	SRP54	100	91.051	Tupaia_belangeri
ENSCGRG00001009525	-	100	89.881	ENSTTRG00000000928	SRP54	100	89.881	Tursiops_truncatus
ENSCGRG00001009525	-	52	99.237	ENSUAMG00000012385	SRP54	100	99.237	Ursus_americanus
ENSCGRG00001009525	-	100	99.603	ENSUMAG00000011234	SRP54	100	99.603	Ursus_maritimus
ENSCGRG00001009525	-	94	99.367	ENSVPAG00000005668	SRP54	100	99.367	Vicugna_pacos
ENSCGRG00001009525	-	100	99.603	ENSVVUG00000019962	SRP54	100	99.603	Vulpes_vulpes
ENSCGRG00001009525	-	100	82.249	ENSXETG00000012290	srp54	100	82.249	Xenopus_tropicalis
ENSCGRG00001009525	-	88	95.937	ENSXCOG00000004658	srp54	96	95.937	Xiphophorus_couchianus
ENSCGRG00001009525	-	100	96.032	ENSXMAG00000018315	srp54	100	96.032	Xiphophorus_maculatus