EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001009760 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 11694 bases
Position: chrscaffold_13:3328718-3340411
Accession: 100765822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001007353	SLBP_RNA_bind	PF15247.6	5e-29	1	1
ENSCGRP00001007351	SLBP_RNA_bind	PF15247.6	5.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001011382	-	768	-	ENSCGRP00001007353	255 (aa)	-	-
ENSCGRT00001011380	-	828	-	ENSCGRP00001007351	275 (aa)	XP_003504157	UPI00022F5109

Gene Model

Click here to download ENSCGRG00001009760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001009760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001009760	-	100	96.000	ENSCGRG00001012991	-	100	96.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001009760	-	100	86.545	ENSG00000163950	SLBP	100	85.818	Homo_sapiens
ENSCGRG00001009760	-	91	43.929	ENSAPOG00000004953	slbp	97	44.000	Acanthochromis_polyacanthus
ENSCGRG00001009760	-	79	94.931	ENSAMEG00000016915	SLBP	100	94.931	Ailuropoda_melanoleuca
ENSCGRG00001009760	-	83	53.012	ENSACIG00000022308	slbp	94	51.429	Amphilophus_citrinellus
ENSCGRG00001009760	-	90	50.000	ENSAOCG00000024545	slbp	88	49.430	Amphiprion_ocellaris
ENSCGRG00001009760	-	85	50.575	ENSAPEG00000017629	slbp	94	47.703	Amphiprion_percula
ENSCGRG00001009760	-	85	50.763	ENSATEG00000016358	slbp	74	57.820	Anabas_testudineus
ENSCGRG00001009760	-	79	75.455	ENSAPLG00000015989	-	100	79.545	Anas_platyrhynchos
ENSCGRG00001009760	-	100	83.688	ENSANAG00000034769	SLBP	100	82.979	Aotus_nancymaae
ENSCGRG00001009760	-	82	52.191	ENSACLG00000007036	-	78	51.613	Astatotilapia_calliptera
ENSCGRG00001009760	-	84	56.452	ENSAMXG00000014527	slbp	77	63.333	Astyanax_mexicanus
ENSCGRG00001009760	-	100	85.455	ENSBTAG00000001328	SLBP	100	85.455	Bos_taurus
ENSCGRG00001009760	-	100	82.270	ENSCJAG00000001790	SLBP	100	82.270	Callithrix_jacchus
ENSCGRG00001009760	-	100	86.182	ENSCAFG00000015016	SLBP	100	86.182	Canis_familiaris
ENSCGRG00001009760	-	100	86.182	ENSCAFG00020012334	SLBP	100	86.182	Canis_lupus_dingo
ENSCGRG00001009760	-	100	85.091	ENSCHIG00000019364	SLBP	100	85.091	Capra_hircus
ENSCGRG00001009760	-	100	87.636	ENSTSYG00000000376	SLBP	100	86.545	Carlito_syrichta
ENSCGRG00001009760	-	66	90.055	ENSCAPG00000016340	SLBP	100	90.055	Cavia_aperea
ENSCGRG00001009760	-	100	85.305	ENSCPOG00000000031	SLBP	100	85.305	Cavia_porcellus
ENSCGRG00001009760	-	67	84.762	ENSCCAG00000026134	SLBP	85	82.857	Cebus_capucinus
ENSCGRG00001009760	-	100	86.545	ENSCATG00000029173	SLBP	100	85.818	Cercocebus_atys
ENSCGRG00001009760	-	100	85.091	ENSCLAG00000008157	SLBP	100	85.145	Chinchilla_lanigera
ENSCGRG00001009760	-	100	72.500	ENSCSAG00000015628	SLBP	100	72.500	Chlorocebus_sabaeus
ENSCGRG00001009760	-	100	69.858	ENSCPBG00000000746	SLBP	100	71.986	Chrysemys_picta_bellii
ENSCGRG00001009760	-	79	89.815	ENSCANG00000041008	SLBP	100	88.889	Colobus_angolensis_palliatus
ENSCGRG00001009760	-	100	100.000	ENSCGRG00000004506	Slbp	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001009760	-	83	51.793	ENSCSEG00000020337	-	81	54.667	Cynoglossus_semilaevis
ENSCGRG00001009760	-	83	49.200	ENSCVAG00000019592	-	76	55.610	Cyprinodon_variegatus
ENSCGRG00001009760	-	84	56.098	ENSDARG00000100558	slbp	67	62.069	Danio_rerio
ENSCGRG00001009760	-	100	78.445	ENSDNOG00000047539	SLBP	100	79.152	Dasypus_novemcinctus
ENSCGRG00001009760	-	79	92.130	ENSDORG00000003028	Slbp	100	92.130	Dipodomys_ordii
ENSCGRG00001009760	-	86	80.335	ENSETEG00000004641	SLBP	99	80.335	Echinops_telfairi
ENSCGRG00001009760	-	70	93.229	ENSEASG00005022714	SLBP	100	93.229	Equus_asinus_asinus
ENSCGRG00001009760	-	87	80.335	ENSECAG00000011689	SLBP	69	89.524	Equus_caballus
ENSCGRG00001009760	-	87	51.515	ENSELUG00000012854	slbp	92	49.042	Esox_lucius
ENSCGRG00001009760	-	100	87.636	ENSFCAG00000000169	SLBP	100	87.636	Felis_catus
ENSCGRG00001009760	-	100	69.395	ENSFALG00000010003	-	100	69.039	Ficedula_albicollis
ENSCGRG00001009760	-	92	90.119	ENSFDAG00000007592	SLBP	99	90.119	Fukomys_damarensis
ENSCGRG00001009760	-	82	50.607	ENSFHEG00000007497	slbp	80	50.463	Fundulus_heteroclitus
ENSCGRG00001009760	-	53	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSCGRG00001009760	-	100	69.039	ENSGALG00000015712	SLBP	100	71.174	Gallus_gallus
ENSCGRG00001009760	-	85	51.538	ENSGAFG00000019577	slbp	85	54.505	Gambusia_affinis
ENSCGRG00001009760	-	86	49.398	ENSGACG00000019596	slbp	82	55.392	Gasterosteus_aculeatus
ENSCGRG00001009760	-	86	68.443	ENSGAGG00000012096	SLBP	91	72.247	Gopherus_agassizii
ENSCGRG00001009760	-	100	86.545	ENSGGOG00000003167	SLBP	100	85.818	Gorilla_gorilla
ENSCGRG00001009760	-	82	51.969	ENSHBUG00000003338	-	78	51.613	Haplochromis_burtoni
ENSCGRG00001009760	-	84	84.475	ENSHGLG00000010461	-	96	84.483	Heterocephalus_glaber_female
ENSCGRG00001009760	-	89	85.088	ENSHGLG00000008313	-	100	81.176	Heterocephalus_glaber_female
ENSCGRG00001009760	-	100	76.364	ENSHGLG00000005955	-	100	76.364	Heterocephalus_glaber_female
ENSCGRG00001009760	-	100	87.636	ENSHGLG00100014018	-	100	87.636	Heterocephalus_glaber_male
ENSCGRG00001009760	-	84	84.475	ENSHGLG00100014906	-	96	84.483	Heterocephalus_glaber_male
ENSCGRG00001009760	-	89	85.965	ENSHGLG00100010510	-	100	81.961	Heterocephalus_glaber_male
ENSCGRG00001009760	-	89	47.925	ENSHCOG00000013425	slbp	80	52.273	Hippocampus_comes
ENSCGRG00001009760	-	70	67.172	ENSIPUG00000016780	slbp	74	67.172	Ictalurus_punctatus
ENSCGRG00001009760	-	100	90.909	ENSSTOG00000003262	SLBP	100	90.909	Ictidomys_tridecemlineatus
ENSCGRG00001009760	-	100	90.545	ENSJJAG00000002394	-	100	90.545	Jaculus_jaculus
ENSCGRG00001009760	-	100	92.000	ENSJJAG00000020549	-	100	92.000	Jaculus_jaculus
ENSCGRG00001009760	-	86	50.373	ENSKMAG00000008187	slbp	83	52.790	Kryptolebias_marmoratus
ENSCGRG00001009760	-	84	51.765	ENSLBEG00000024709	slbp	76	53.333	Labrus_bergylta
ENSCGRG00001009760	-	95	56.250	ENSLACG00000014623	SLBP	96	55.882	Latimeria_chalumnae
ENSCGRG00001009760	-	100	49.498	ENSLOCG00000011027	slbp	99	49.498	Lepisosteus_oculatus
ENSCGRG00001009760	-	85	86.266	ENSLAFG00000012933	SLBP	100	85.185	Loxodonta_africana
ENSCGRG00001009760	-	91	88.048	ENSMFAG00000030130	SLBP	81	86.719	Macaca_fascicularis
ENSCGRG00001009760	-	96	83.026	ENSMMUG00000032303	SLBP	96	89.401	Macaca_mulatta
ENSCGRG00001009760	-	100	67.376	ENSMNEG00000008082	SLBP	100	66.667	Macaca_nemestrina
ENSCGRG00001009760	-	93	80.000	ENSMLEG00000024639	SLBP	98	79.216	Mandrillus_leucophaeus
ENSCGRG00001009760	-	85	47.490	ENSMAMG00000001046	-	90	47.656	Mastacembelus_armatus
ENSCGRG00001009760	-	82	51.969	ENSMZEG00005017261	-	78	51.613	Maylandia_zebra
ENSCGRG00001009760	-	79	76.498	ENSMGAG00000013085	SLBP	100	79.263	Meleagris_gallopavo
ENSCGRG00001009760	-	100	98.545	ENSMAUG00000009490	Slbp	100	98.545	Mesocricetus_auratus
ENSCGRG00001009760	-	100	86.545	ENSMICG00000014244	SLBP	100	85.455	Microcebus_murinus
ENSCGRG00001009760	-	100	96.727	ENSMOCG00000015826	Slbp	99	96.727	Microtus_ochrogaster
ENSCGRG00001009760	-	85	50.633	ENSMMOG00000010181	slbp	93	50.424	Mola_mola
ENSCGRG00001009760	-	92	82.171	ENSMODG00000004304	SLBP	99	82.171	Monodelphis_domestica
ENSCGRG00001009760	-	84	48.077	ENSMALG00000013883	-	54	55.502	Monopterus_albus
ENSCGRG00001009760	-	100	95.273	MGP_CAROLIEiJ_G0027117	Slbp	100	95.273	Mus_caroli
ENSCGRG00001009760	-	100	95.636	ENSMUSG00000004642	Slbp	100	95.636	Mus_musculus
ENSCGRG00001009760	-	100	95.636	MGP_PahariEiJ_G0016901	Slbp	100	95.636	Mus_pahari
ENSCGRG00001009760	-	100	95.636	MGP_SPRETEiJ_G0028113	Slbp	100	95.636	Mus_spretus
ENSCGRG00001009760	-	67	92.391	ENSMPUG00000011139	SLBP	94	92.391	Mustela_putorius_furo
ENSCGRG00001009760	-	79	88.532	ENSMLUG00000004425	SLBP	93	88.532	Myotis_lucifugus
ENSCGRG00001009760	-	100	89.455	ENSNGAG00000020799	Slbp	100	89.455	Nannospalax_galili
ENSCGRG00001009760	-	81	52.459	ENSNBRG00000006044	-	85	53.448	Neolamprologus_brichardi
ENSCGRG00001009760	-	100	84.397	ENSNLEG00000000048	SLBP	100	83.688	Nomascus_leucogenys
ENSCGRG00001009760	-	65	88.202	ENSMEUG00000002501	SLBP	100	88.202	Notamacropus_eugenii
ENSCGRG00001009760	-	100	85.455	ENSODEG00000012641	SLBP	100	85.455	Octodon_degus
ENSCGRG00001009760	-	82	52.362	ENSONIG00000017469	-	78	52.074	Oreochromis_niloticus
ENSCGRG00001009760	-	79	82.949	ENSOANG00000014243	SLBP	95	85.714	Ornithorhynchus_anatinus
ENSCGRG00001009760	-	84	51.440	ENSORLG00000024887	-	88	48.319	Oryzias_latipes
ENSCGRG00001009760	-	84	51.029	ENSORLG00020007798	slbp	75	53.431	Oryzias_latipes_hni
ENSCGRG00001009760	-	84	51.852	ENSORLG00015016656	slbp	73	54.545	Oryzias_latipes_hsok
ENSCGRG00001009760	-	84	51.029	ENSOMEG00000010818	slbp	73	55.779	Oryzias_melastigma
ENSCGRG00001009760	-	100	85.818	ENSOGAG00000009750	SLBP	100	85.091	Otolemur_garnettii
ENSCGRG00001009760	-	79	91.705	ENSOARG00000016090	SLBP	100	91.705	Ovis_aries
ENSCGRG00001009760	-	100	86.909	ENSPPAG00000033300	SLBP	100	86.182	Pan_paniscus
ENSCGRG00001009760	-	91	90.000	ENSPPRG00000016897	SLBP	100	90.000	Panthera_pardus
ENSCGRG00001009760	-	70	93.229	ENSPTIG00000015057	SLBP	100	93.229	Panthera_tigris_altaica
ENSCGRG00001009760	-	100	86.545	ENSPTRG00000015832	SLBP	100	85.818	Pan_troglodytes
ENSCGRG00001009760	-	100	82.746	ENSPANG00000004932	SLBP	100	82.042	Papio_anubis
ENSCGRG00001009760	-	88	53.257	ENSPKIG00000006183	slbp	94	51.282	Paramormyrops_kingsleyae
ENSCGRG00001009760	-	80	51.542	ENSPMGG00000017684	-	88	59.887	Periophthalmus_magnuspinnatus
ENSCGRG00001009760	-	100	97.455	ENSPEMG00000018369	Slbp	100	97.455	Peromyscus_maniculatus_bairdii
ENSCGRG00001009760	-	100	75.083	ENSPCIG00000013575	SLBP	86	75.083	Phascolarctos_cinereus
ENSCGRG00001009760	-	85	50.965	ENSPFOG00000000462	slbp	80	54.505	Poecilia_formosa
ENSCGRG00001009760	-	85	51.351	ENSPLAG00000008300	slbp	85	52.444	Poecilia_latipinna
ENSCGRG00001009760	-	85	50.965	ENSPMEG00000020807	slbp	80	54.505	Poecilia_mexicana
ENSCGRG00001009760	-	85	50.965	ENSPREG00000004561	slbp	80	54.505	Poecilia_reticulata
ENSCGRG00001009760	-	100	86.909	ENSPPYG00000014529	SLBP	100	86.182	Pongo_abelii
ENSCGRG00001009760	-	100	87.273	ENSPCOG00000017399	SLBP	100	86.182	Propithecus_coquereli
ENSCGRG00001009760	-	100	80.364	ENSPVAG00000002807	SLBP	100	80.364	Pteropus_vampyrus
ENSCGRG00001009760	-	82	51.969	ENSPNYG00000005451	-	78	51.613	Pundamilia_nyererei
ENSCGRG00001009760	-	82	58.750	ENSPNAG00000018503	slbp	89	58.750	Pygocentrus_nattereri
ENSCGRG00001009760	-	100	95.273	ENSRNOG00000037162	Slbp	100	95.273	Rattus_norvegicus
ENSCGRG00001009760	-	100	86.545	ENSRBIG00000039159	SLBP	100	85.818	Rhinopithecus_bieti
ENSCGRG00001009760	-	96	86.364	ENSRROG00000030081	SLBP	97	85.606	Rhinopithecus_roxellana
ENSCGRG00001009760	-	70	89.583	ENSSBOG00000033897	SLBP	100	88.542	Saimiri_boliviensis_boliviensis
ENSCGRG00001009760	-	100	74.247	ENSSHAG00000013939	SLBP	100	74.247	Sarcophilus_harrisii
ENSCGRG00001009760	-	91	54.909	ENSSFOG00015019429	slbp	98	51.825	Scleropages_formosus
ENSCGRG00001009760	-	73	51.802	ENSSMAG00000016028	-	77	52.055	Scophthalmus_maximus
ENSCGRG00001009760	-	82	50.800	ENSSDUG00000000855	-	77	55.399	Seriola_dumerili
ENSCGRG00001009760	-	50	53.333	ENSSLDG00000022893	-	89	52.980	Seriola_lalandi_dorsalis
ENSCGRG00001009760	-	70	42.188	ENSSLDG00000007554	-	66	42.188	Seriola_lalandi_dorsalis
ENSCGRG00001009760	-	92	69.412	ENSSPUG00000016007	SLBP	98	67.537	Sphenodon_punctatus
ENSCGRG00001009760	-	82	51.190	ENSSPAG00000004021	slbp	81	56.938	Stegastes_partitus
ENSCGRG00001009760	-	100	84.000	ENSSSCG00000008676	SLBP	100	84.000	Sus_scrofa
ENSCGRG00001009760	-	93	69.349	ENSTGUG00000010626	-	100	71.264	Taeniopygia_guttata
ENSCGRG00001009760	-	91	50.554	ENSTRUG00000000688	slbp	97	48.689	Takifugu_rubripes
ENSCGRG00001009760	-	88	46.923	ENSTNIG00000000484	-	82	49.091	Tetraodon_nigroviridis
ENSCGRG00001009760	-	68	94.118	ENSTBEG00000004085	SLBP	100	68.110	Tupaia_belangeri
ENSCGRG00001009760	-	65	88.764	ENSTTRG00000004010	-	100	88.764	Tursiops_truncatus
ENSCGRG00001009760	-	79	93.981	ENSTTRG00000010901	-	100	93.981	Tursiops_truncatus
ENSCGRG00001009760	-	100	87.365	ENSUAMG00000012990	SLBP	100	87.365	Ursus_americanus
ENSCGRG00001009760	-	70	93.229	ENSUMAG00000006119	SLBP	100	93.229	Ursus_maritimus
ENSCGRG00001009760	-	100	85.455	ENSVVUG00000015578	-	100	85.455	Vulpes_vulpes
ENSCGRG00001009760	-	94	55.094	ENSXETG00000003876	slbp	95	57.895	Xenopus_tropicalis
ENSCGRG00001009760	-	76	54.185	ENSXCOG00000008275	slbp	85	54.464	Xiphophorus_couchianus
ENSCGRG00001009760	-	85	50.965	ENSXMAG00000001331	-	79	54.505	Xiphophorus_maculatus