EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001010616 (Gene tree)
Gene ID: -
Gene Symbol: Urb1
Alias: 4921511H13Rik|5730405K23Rik
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 57168 bases
Position: chrscaffold_8:65527750-65584917
Accession: 100766838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008328	Npa1	PF11707.8	4.9e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012449	-	7406	XM_016968284	ENSCGRP00001008328	2266 (aa)	XP_016823773	-

Gene Model

Click here to download ENSCGRG00001010616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010616	Urb1	99	77.249	ENSG00000142207	URB1	99	77.441	Homo_sapiens
ENSCGRG00001010616	Urb1	97	46.590	ENSAPOG00000020308	urb1	98	47.188	Acanthochromis_polyacanthus
ENSCGRG00001010616	Urb1	99	74.890	ENSAMEG00000011998	URB1	98	75.100	Ailuropoda_melanoleuca
ENSCGRG00001010616	Urb1	95	44.480	ENSACIG00000003248	urb1	96	44.618	Amphilophus_citrinellus
ENSCGRG00001010616	Urb1	99	40.244	ENSAOCG00000010364	urb1	99	40.502	Amphiprion_ocellaris
ENSCGRG00001010616	Urb1	97	50.947	ENSAPEG00000010758	urb1	98	51.623	Amphiprion_percula
ENSCGRG00001010616	Urb1	98	44.135	ENSATEG00000011790	urb1	97	44.135	Anabas_testudineus
ENSCGRG00001010616	Urb1	97	54.635	ENSAPLG00000012791	URB1	100	54.725	Anas_platyrhynchos
ENSCGRG00001010616	Urb1	99	52.379	ENSACAG00000002817	URB1	98	52.467	Anolis_carolinensis
ENSCGRG00001010616	Urb1	100	76.220	ENSANAG00000024617	URB1	99	76.447	Aotus_nancymaae
ENSCGRG00001010616	Urb1	99	44.749	ENSACLG00000024865	urb1	99	44.894	Astatotilapia_calliptera
ENSCGRG00001010616	Urb1	99	40.193	ENSAMXG00000012306	urb1	98	40.309	Astyanax_mexicanus
ENSCGRG00001010616	Urb1	99	71.711	ENSBTAG00000012412	URB1	98	71.803	Bos_taurus
ENSCGRG00001010616	Urb1	99	75.879	ENSCJAG00000009118	URB1	99	76.101	Callithrix_jacchus
ENSCGRG00001010616	Urb1	99	75.055	ENSCAFG00000008892	URB1	99	75.156	Canis_familiaris
ENSCGRG00001010616	Urb1	99	74.714	ENSCAFG00020025987	-	98	74.877	Canis_lupus_dingo
ENSCGRG00001010616	Urb1	99	73.768	ENSCAFG00020025994	-	98	73.874	Canis_lupus_dingo
ENSCGRG00001010616	Urb1	99	71.491	ENSCHIG00000015645	URB1	98	71.613	Capra_hircus
ENSCGRG00001010616	Urb1	99	77.059	ENSTSYG00000013286	URB1	99	77.273	Carlito_syrichta
ENSCGRG00001010616	Urb1	98	74.201	ENSCAPG00000015589	URB1	99	74.201	Cavia_aperea
ENSCGRG00001010616	Urb1	99	75.385	ENSCPOG00000006748	URB1	98	75.602	Cavia_porcellus
ENSCGRG00001010616	Urb1	99	76.320	ENSCCAG00000021299	URB1	99	76.549	Cebus_capucinus
ENSCGRG00001010616	Urb1	99	76.805	ENSCATG00000042630	URB1	99	77.084	Cercocebus_atys
ENSCGRG00001010616	Urb1	100	76.199	ENSCLAG00000005262	URB1	99	76.560	Chinchilla_lanigera
ENSCGRG00001010616	Urb1	99	75.416	ENSCSAG00000009584	URB1	99	75.677	Chlorocebus_sabaeus
ENSCGRG00001010616	Urb1	99	57.467	ENSCPBG00000006454	URB1	99	57.578	Chrysemys_picta_bellii
ENSCGRG00001010616	Urb1	99	76.673	ENSCANG00000031088	URB1	99	76.951	Colobus_angolensis_palliatus
ENSCGRG00001010616	Urb1	98	99.370	ENSCGRG00000015840	Urb1	100	99.370	Cricetulus_griseus_crigri
ENSCGRG00001010616	Urb1	98	46.354	ENSCSEG00000012616	urb1	99	47.953	Cynoglossus_semilaevis
ENSCGRG00001010616	Urb1	99	44.656	ENSCVAG00000009076	urb1	99	51.140	Cyprinodon_variegatus
ENSCGRG00001010616	Urb1	97	45.641	ENSDARG00000060308	urb1	99	47.953	Danio_rerio
ENSCGRG00001010616	Urb1	85	74.445	ENSDNOG00000015586	URB1	98	74.790	Dasypus_novemcinctus
ENSCGRG00001010616	Urb1	100	75.407	ENSDORG00000006735	Urb1	99	75.624	Dipodomys_ordii
ENSCGRG00001010616	Urb1	92	74.909	ENSETEG00000009080	URB1	91	76.200	Echinops_telfairi
ENSCGRG00001010616	Urb1	99	74.449	ENSEASG00005007711	URB1	98	74.654	Equus_asinus_asinus
ENSCGRG00001010616	Urb1	97	81.922	ENSECAG00000013206	URB1	98	82.840	Equus_caballus
ENSCGRG00001010616	Urb1	58	83.817	ENSEEUG00000003626	-	57	83.817	Erinaceus_europaeus
ENSCGRG00001010616	Urb1	99	44.074	ENSELUG00000020516	urb1	97	44.563	Esox_lucius
ENSCGRG00001010616	Urb1	99	74.428	ENSFCAG00000002177	URB1	99	74.632	Felis_catus
ENSCGRG00001010616	Urb1	98	50.664	ENSFALG00000004636	URB1	99	50.752	Ficedula_albicollis
ENSCGRG00001010616	Urb1	99	75.901	ENSFDAG00000007288	URB1	94	76.258	Fukomys_damarensis
ENSCGRG00001010616	Urb1	99	41.151	ENSFHEG00000000202	urb1	99	42.177	Fundulus_heteroclitus
ENSCGRG00001010616	Urb1	92	46.344	ENSGMOG00000001838	urb1	93	46.454	Gadus_morhua
ENSCGRG00001010616	Urb1	99	55.526	ENSGALG00000015887	URB1	99	55.560	Gallus_gallus
ENSCGRG00001010616	Urb1	95	52.068	ENSGAFG00000020694	urb1	98	52.386	Gambusia_affinis
ENSCGRG00001010616	Urb1	99	44.025	ENSGACG00000011703	urb1	99	44.000	Gasterosteus_aculeatus
ENSCGRG00001010616	Urb1	99	57.024	ENSGAGG00000022544	URB1	99	57.130	Gopherus_agassizii
ENSCGRG00001010616	Urb1	99	77.289	ENSGGOG00000000285	URB1	99	77.530	Gorilla_gorilla
ENSCGRG00001010616	Urb1	99	44.701	ENSHBUG00000001904	urb1	99	44.846	Haplochromis_burtoni
ENSCGRG00001010616	Urb1	100	74.718	ENSHGLG00000004907	URB1	99	74.879	Heterocephalus_glaber_female
ENSCGRG00001010616	Urb1	100	75.308	ENSHGLG00100010749	URB1	99	75.434	Heterocephalus_glaber_male
ENSCGRG00001010616	Urb1	69	50.097	ENSHCOG00000018683	urb1	95	51.411	Hippocampus_comes
ENSCGRG00001010616	Urb1	99	40.330	ENSIPUG00000014721	urb1	99	40.473	Ictalurus_punctatus
ENSCGRG00001010616	Urb1	99	77.689	ENSSTOG00000004539	URB1	98	77.669	Ictidomys_tridecemlineatus
ENSCGRG00001010616	Urb1	99	41.055	ENSKMAG00000006001	urb1	98	46.944	Kryptolebias_marmoratus
ENSCGRG00001010616	Urb1	97	41.200	ENSLBEG00000027208	urb1	98	50.378	Labrus_bergylta
ENSCGRG00001010616	Urb1	99	47.910	ENSLACG00000017059	URB1	99	48.168	Latimeria_chalumnae
ENSCGRG00001010616	Urb1	99	44.415	ENSLOCG00000009190	urb1	99	44.644	Lepisosteus_oculatus
ENSCGRG00001010616	Urb1	100	71.753	ENSLAFG00000010407	URB1	99	72.190	Loxodonta_africana
ENSCGRG00001010616	Urb1	99	76.717	ENSMFAG00000034391	URB1	95	76.995	Macaca_fascicularis
ENSCGRG00001010616	Urb1	99	76.585	ENSMMUG00000010295	URB1	99	76.861	Macaca_mulatta
ENSCGRG00001010616	Urb1	99	75.275	ENSMNEG00000032981	URB1	98	75.535	Macaca_nemestrina
ENSCGRG00001010616	Urb1	99	76.849	ENSMLEG00000041435	URB1	99	77.129	Mandrillus_leucophaeus
ENSCGRG00001010616	Urb1	99	42.776	ENSMAMG00000011238	urb1	98	42.775	Mastacembelus_armatus
ENSCGRG00001010616	Urb1	99	41.913	ENSMZEG00005011862	urb1	99	42.029	Maylandia_zebra
ENSCGRG00001010616	Urb1	98	55.669	ENSMGAG00000014512	URB1	99	55.669	Meleagris_gallopavo
ENSCGRG00001010616	Urb1	93	89.810	ENSMAUG00000010516	Urb1	99	89.810	Mesocricetus_auratus
ENSCGRG00001010616	Urb1	99	76.092	ENSMICG00000016424	URB1	99	75.959	Microcebus_murinus
ENSCGRG00001010616	Urb1	99	87.633	ENSMOCG00000012613	Urb1	98	87.941	Microtus_ochrogaster
ENSCGRG00001010616	Urb1	99	61.218	ENSMODG00000021076	URB1	99	61.474	Monodelphis_domestica
ENSCGRG00001010616	Urb1	99	42.264	ENSMALG00000017411	urb1	98	51.343	Monopterus_albus
ENSCGRG00001010616	Urb1	100	85.601	MGP_CAROLIEiJ_G0020948	Urb1	98	85.905	Mus_caroli
ENSCGRG00001010616	Urb1	100	85.601	ENSMUSG00000039929	Urb1	98	85.950	Mus_musculus
ENSCGRG00001010616	Urb1	100	85.645	MGP_PahariEiJ_G0016653	Urb1	98	85.905	Mus_pahari
ENSCGRG00001010616	Urb1	100	85.689	MGP_SPRETEiJ_G0021854	Urb1	98	85.995	Mus_spretus
ENSCGRG00001010616	Urb1	100	73.835	ENSMPUG00000001123	URB1	99	74.031	Mustela_putorius_furo
ENSCGRG00001010616	Urb1	99	79.049	ENSNGAG00000001905	Urb1	98	79.403	Nannospalax_galili
ENSCGRG00001010616	Urb1	82	45.592	ENSNBRG00000001049	urb1	98	45.754	Neolamprologus_brichardi
ENSCGRG00001010616	Urb1	99	75.441	ENSNLEG00000026872	URB1	99	75.658	Nomascus_leucogenys
ENSCGRG00001010616	Urb1	96	57.042	ENSMEUG00000010828	URB1	94	57.040	Notamacropus_eugenii
ENSCGRG00001010616	Urb1	99	68.943	ENSOPRG00000013482	URB1	99	68.953	Ochotona_princeps
ENSCGRG00001010616	Urb1	100	75.055	ENSODEG00000002587	URB1	98	75.357	Octodon_degus
ENSCGRG00001010616	Urb1	99	45.166	ENSONIG00000005599	urb1	99	45.310	Oreochromis_niloticus
ENSCGRG00001010616	Urb1	99	74.394	ENSOCUG00000009381	URB1	98	74.487	Oryctolagus_cuniculus
ENSCGRG00001010616	Urb1	99	43.019	ENSORLG00000003429	urb1	99	43.153	Oryzias_latipes
ENSCGRG00001010616	Urb1	99	42.963	ENSORLG00020013785	urb1	99	43.096	Oryzias_latipes_hni
ENSCGRG00001010616	Urb1	95	45.901	ENSORLG00015019421	urb1	96	46.154	Oryzias_latipes_hsok
ENSCGRG00001010616	Urb1	77	50.000	ENSOMEG00000002094	urb1	98	50.118	Oryzias_melastigma
ENSCGRG00001010616	Urb1	99	76.115	ENSOGAG00000017140	URB1	99	75.894	Otolemur_garnettii
ENSCGRG00001010616	Urb1	97	72.128	ENSOARG00000013679	URB1	98	72.641	Ovis_aries
ENSCGRG00001010616	Urb1	99	77.333	ENSPPAG00000003423	URB1	99	77.575	Pan_paniscus
ENSCGRG00001010616	Urb1	99	74.978	ENSPPRG00000023131	URB1	98	75.145	Panthera_pardus
ENSCGRG00001010616	Urb1	92	73.448	ENSPTIG00000016125	URB1	96	74.336	Panthera_tigris_altaica
ENSCGRG00001010616	Urb1	99	77.201	ENSPTRG00000013852	URB1	99	77.441	Pan_troglodytes
ENSCGRG00001010616	Urb1	99	76.937	ENSPANG00000021964	URB1	98	77.252	Papio_anubis
ENSCGRG00001010616	Urb1	99	45.688	ENSPKIG00000003683	urb1	98	45.784	Paramormyrops_kingsleyae
ENSCGRG00001010616	Urb1	99	88.757	ENSPEMG00000021205	Urb1	97	89.102	Peromyscus_maniculatus_bairdii
ENSCGRG00001010616	Urb1	80	33.859	ENSPMAG00000009733	URB1	99	35.339	Petromyzon_marinus
ENSCGRG00001010616	Urb1	99	60.999	ENSPCIG00000016350	URB1	99	61.384	Phascolarctos_cinereus
ENSCGRG00001010616	Urb1	97	42.948	ENSPLAG00000004371	urb1	99	42.948	Poecilia_latipinna
ENSCGRG00001010616	Urb1	99	43.714	ENSPMEG00000006634	urb1	98	43.856	Poecilia_mexicana
ENSCGRG00001010616	Urb1	99	43.265	ENSPREG00000013453	urb1	99	43.401	Poecilia_reticulata
ENSCGRG00001010616	Urb1	99	76.543	ENSPPYG00000011359	URB1	99	76.728	Pongo_abelii
ENSCGRG00001010616	Urb1	99	62.687	ENSPCAG00000007430	URB1	98	63.130	Procavia_capensis
ENSCGRG00001010616	Urb1	99	77.008	ENSPCOG00000022695	URB1	99	77.008	Propithecus_coquereli
ENSCGRG00001010616	Urb1	99	73.128	ENSPVAG00000000889	URB1	98	73.360	Pteropus_vampyrus
ENSCGRG00001010616	Urb1	99	43.482	ENSPNYG00000010589	urb1	99	43.526	Pundamilia_nyererei
ENSCGRG00001010616	Urb1	99	39.398	ENSPNAG00000019324	urb1	98	39.621	Pygocentrus_nattereri
ENSCGRG00001010616	Urb1	100	85.827	ENSRNOG00000002080	Urb1	98	86.358	Rattus_norvegicus
ENSCGRG00001010616	Urb1	99	76.540	ENSRBIG00000033122	URB1	99	76.817	Rhinopithecus_bieti
ENSCGRG00001010616	Urb1	99	76.585	ENSRROG00000040237	URB1	99	76.861	Rhinopithecus_roxellana
ENSCGRG00001010616	Urb1	99	76.199	ENSSBOG00000027672	URB1	99	76.447	Saimiri_boliviensis_boliviensis
ENSCGRG00001010616	Urb1	99	60.989	ENSSHAG00000005140	URB1	99	61.170	Sarcophilus_harrisii
ENSCGRG00001010616	Urb1	93	44.866	ENSSFOG00015000339	urb1	98	45.126	Scleropages_formosus
ENSCGRG00001010616	Urb1	99	43.665	ENSSMAG00000003782	urb1	99	43.627	Scophthalmus_maximus
ENSCGRG00001010616	Urb1	99	44.614	ENSSDUG00000012313	urb1	99	44.718	Seriola_dumerili
ENSCGRG00001010616	Urb1	99	44.483	ENSSLDG00000023179	urb1	99	44.577	Seriola_lalandi_dorsalis
ENSCGRG00001010616	Urb1	99	53.957	ENSSPUG00000012447	URB1	98	54.369	Sphenodon_punctatus
ENSCGRG00001010616	Urb1	99	43.777	ENSSPAG00000006325	urb1	99	43.995	Stegastes_partitus
ENSCGRG00001010616	Urb1	99	72.879	ENSSSCG00000032024	URB1	98	73.019	Sus_scrofa
ENSCGRG00001010616	Urb1	74	57.330	ENSTGUG00000013442	URB1	100	57.271	Taeniopygia_guttata
ENSCGRG00001010616	Urb1	99	43.454	ENSTRUG00000009372	urb1	99	43.497	Takifugu_rubripes
ENSCGRG00001010616	Urb1	99	42.826	ENSTNIG00000016277	urb1	99	42.738	Tetraodon_nigroviridis
ENSCGRG00001010616	Urb1	81	79.827	ENSTBEG00000010044	URB1	79	79.827	Tupaia_belangeri
ENSCGRG00001010616	Urb1	91	73.931	ENSTTRG00000007712	URB1	92	74.348	Tursiops_truncatus
ENSCGRG00001010616	Urb1	99	74.537	ENSUAMG00000012231	URB1	98	74.788	Ursus_americanus
ENSCGRG00001010616	Urb1	93	75.318	ENSUMAG00000017419	URB1	97	76.259	Ursus_maritimus
ENSCGRG00001010616	Urb1	68	84.127	ENSVPAG00000001164	URB1	67	84.127	Vicugna_pacos
ENSCGRG00001010616	Urb1	99	74.780	ENSVVUG00000000551	URB1	98	74.944	Vulpes_vulpes
ENSCGRG00001010616	Urb1	99	49.201	ENSXETG00000009895	urb1	99	49.519	Xenopus_tropicalis
ENSCGRG00001010616	Urb1	99	41.084	ENSXCOG00000005500	urb1	97	45.573	Xiphophorus_couchianus
ENSCGRG00001010616	Urb1	99	41.148	ENSXMAG00000007253	urb1	97	45.796	Xiphophorus_maculatus