EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001010676 (Gene tree)
Gene ID: -
Gene Symbol: Xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 66764 bases
Position: chrscaffold_3:8140423-8207186
Accession: 894687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008407	XRN_N	PF03159.18	1e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012536	-	5498	-	ENSCGRP00001008407	930 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001010676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001010676	Xrn2	73	39.323	ENSCGRG00001019411	Xrn1	61	38.733

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010676	Xrn2	99	96.878	ENSG00000088930	XRN2	98	96.878	Homo_sapiens
ENSCGRG00001010676	Xrn2	99	72.436	ENSAPOG00000009818	xrn2	96	72.340	Acanthochromis_polyacanthus
ENSCGRG00001010676	Xrn2	99	96.340	ENSAMEG00000012581	XRN2	98	96.340	Ailuropoda_melanoleuca
ENSCGRG00001010676	Xrn2	92	71.331	ENSACIG00000015047	xrn2	95	75.240	Amphilophus_citrinellus
ENSCGRG00001010676	Xrn2	99	72.756	ENSAOCG00000023632	xrn2	96	72.766	Amphiprion_ocellaris
ENSCGRG00001010676	Xrn2	99	72.892	ENSAPEG00000014871	xrn2	96	72.582	Amphiprion_percula
ENSCGRG00001010676	Xrn2	97	71.939	ENSATEG00000001273	xrn2	98	70.947	Anabas_testudineus
ENSCGRG00001010676	Xrn2	97	83.736	ENSAPLG00000013869	XRN2	98	83.736	Anas_platyrhynchos
ENSCGRG00001010676	Xrn2	99	80.467	ENSACAG00000005565	XRN2	98	79.936	Anolis_carolinensis
ENSCGRG00001010676	Xrn2	99	96.233	ENSANAG00000020126	XRN2	98	96.233	Aotus_nancymaae
ENSCGRG00001010676	Xrn2	92	74.480	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSCGRG00001010676	Xrn2	100	72.292	ENSAMXG00000018301	xrn2	98	72.188	Astyanax_mexicanus
ENSCGRG00001010676	Xrn2	99	94.194	ENSBTAG00000011304	XRN2	98	94.194	Bos_taurus
ENSCGRG00001010676	Xrn2	88	55.128	WBGene00006964	xrn-2	88	54.943	Caenorhabditis_elegans
ENSCGRG00001010676	Xrn2	99	96.340	ENSCJAG00000005611	XRN2	98	96.340	Callithrix_jacchus
ENSCGRG00001010676	Xrn2	99	96.340	ENSCAFG00000005185	XRN2	98	96.340	Canis_familiaris
ENSCGRG00001010676	Xrn2	99	96.340	ENSCAFG00020027479	XRN2	98	96.340	Canis_lupus_dingo
ENSCGRG00001010676	Xrn2	100	94.105	ENSCHIG00000006921	XRN2	98	94.194	Capra_hircus
ENSCGRG00001010676	Xrn2	99	95.797	ENSTSYG00000008315	XRN2	98	95.797	Carlito_syrichta
ENSCGRG00001010676	Xrn2	97	81.347	ENSCAPG00000010773	XRN2	97	81.347	Cavia_aperea
ENSCGRG00001010676	Xrn2	99	96.878	ENSCPOG00000009407	XRN2	98	96.878	Cavia_porcellus
ENSCGRG00001010676	Xrn2	99	97.094	ENSCATG00000040350	XRN2	99	97.094	Cercocebus_atys
ENSCGRG00001010676	Xrn2	99	96.771	ENSCLAG00000013419	XRN2	98	96.771	Chinchilla_lanigera
ENSCGRG00001010676	Xrn2	99	97.094	ENSCSAG00000011094	XRN2	98	97.094	Chlorocebus_sabaeus
ENSCGRG00001010676	Xrn2	67	99.462	ENSCHOG00000013404	XRN2	68	99.462	Choloepus_hoffmanni
ENSCGRG00001010676	Xrn2	99	84.936	ENSCPBG00000023533	XRN2	98	84.509	Chrysemys_picta_bellii
ENSCGRG00001010676	Xrn2	88	59.905	ENSCING00000022336	-	100	60.263	Ciona_intestinalis
ENSCGRG00001010676	Xrn2	88	58.115	ENSCSAVG00000011217	-	100	61.641	Ciona_savignyi
ENSCGRG00001010676	Xrn2	99	97.094	ENSCANG00000040240	XRN2	98	97.094	Colobus_angolensis_palliatus
ENSCGRG00001010676	Xrn2	97	99.226	ENSCGRG00000006378	Xrn2	98	99.226	Cricetulus_griseus_crigri
ENSCGRG00001010676	Xrn2	55	73.425	ENSCSEG00000005628	xrn2	100	73.228	Cynoglossus_semilaevis
ENSCGRG00001010676	Xrn2	91	72.184	ENSCVAG00000018999	xrn2	98	77.714	Cyprinodon_variegatus
ENSCGRG00001010676	Xrn2	99	70.737	ENSDARG00000101900	xrn2	96	78.394	Danio_rerio
ENSCGRG00001010676	Xrn2	99	96.017	ENSDNOG00000001895	XRN2	98	96.017	Dasypus_novemcinctus
ENSCGRG00001010676	Xrn2	99	94.403	ENSDORG00000005434	Xrn2	98	94.403	Dipodomys_ordii
ENSCGRG00001010676	Xrn2	88	55.889	FBgn0031868	Rat1	87	55.811	Drosophila_melanogaster
ENSCGRG00001010676	Xrn2	99	82.562	ENSETEG00000001740	XRN2	91	93.674	Echinops_telfairi
ENSCGRG00001010676	Xrn2	86	71.429	ENSEBUG00000016136	xrn2	100	71.186	Eptatretus_burgeri
ENSCGRG00001010676	Xrn2	99	96.125	ENSEASG00005002484	XRN2	98	96.125	Equus_asinus_asinus
ENSCGRG00001010676	Xrn2	99	96.233	ENSECAG00000018988	XRN2	94	100.000	Equus_caballus
ENSCGRG00001010676	Xrn2	77	100.000	ENSEEUG00000009265	XRN2	76	100.000	Erinaceus_europaeus
ENSCGRG00001010676	Xrn2	98	72.264	ENSELUG00000000552	xrn2	98	71.249	Esox_lucius
ENSCGRG00001010676	Xrn2	99	96.125	ENSFCAG00000007970	XRN2	98	96.125	Felis_catus
ENSCGRG00001010676	Xrn2	99	82.995	ENSFALG00000004508	XRN2	98	82.995	Ficedula_albicollis
ENSCGRG00001010676	Xrn2	99	96.233	ENSFDAG00000016311	XRN2	98	96.233	Fukomys_damarensis
ENSCGRG00001010676	Xrn2	55	70.802	ENSFHEG00000013039	xrn2	98	70.420	Fundulus_heteroclitus
ENSCGRG00001010676	Xrn2	88	73.325	ENSGMOG00000013436	xrn2	100	73.325	Gadus_morhua
ENSCGRG00001010676	Xrn2	99	82.906	ENSGALG00000008372	XRN2	98	82.799	Gallus_gallus
ENSCGRG00001010676	Xrn2	91	74.797	ENSGAFG00000014284	xrn2	98	74.564	Gambusia_affinis
ENSCGRG00001010676	Xrn2	89	75.422	ENSGACG00000011870	xrn2	100	75.422	Gasterosteus_aculeatus
ENSCGRG00001010676	Xrn2	99	84.509	ENSGAGG00000004884	XRN2	98	84.081	Gopherus_agassizii
ENSCGRG00001010676	Xrn2	99	97.094	ENSGGOG00000013738	XRN2	98	97.094	Gorilla_gorilla
ENSCGRG00001010676	Xrn2	55	75.432	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSCGRG00001010676	Xrn2	99	95.371	ENSHGLG00000014831	XRN2	98	95.156	Heterocephalus_glaber_female
ENSCGRG00001010676	Xrn2	99	95.371	ENSHGLG00100013130	XRN2	98	95.156	Heterocephalus_glaber_male
ENSCGRG00001010676	Xrn2	97	71.568	ENSHCOG00000011994	xrn2	92	74.911	Hippocampus_comes
ENSCGRG00001010676	Xrn2	100	70.820	ENSIPUG00000006639	xrn2	98	70.613	Ictalurus_punctatus
ENSCGRG00001010676	Xrn2	99	96.663	ENSSTOG00000000589	XRN2	98	96.663	Ictidomys_tridecemlineatus
ENSCGRG00001010676	Xrn2	99	96.233	ENSJJAG00000022128	Xrn2	98	96.233	Jaculus_jaculus
ENSCGRG00001010676	Xrn2	55	80.588	ENSLBEG00000010041	xrn2	100	80.196	Labrus_bergylta
ENSCGRG00001010676	Xrn2	96	76.726	ENSLACG00000008307	XRN2	99	78.624	Latimeria_chalumnae
ENSCGRG00001010676	Xrn2	100	73.056	ENSLOCG00000016874	xrn2	98	73.056	Lepisosteus_oculatus
ENSCGRG00001010676	Xrn2	99	95.371	ENSLAFG00000014624	XRN2	98	95.371	Loxodonta_africana
ENSCGRG00001010676	Xrn2	99	97.094	ENSMFAG00000038122	XRN2	98	97.094	Macaca_fascicularis
ENSCGRG00001010676	Xrn2	99	97.094	ENSMMUG00000011405	XRN2	98	97.094	Macaca_mulatta
ENSCGRG00001010676	Xrn2	99	96.986	ENSMNEG00000040626	XRN2	98	96.986	Macaca_nemestrina
ENSCGRG00001010676	Xrn2	99	96.986	ENSMLEG00000041897	XRN2	98	96.986	Mandrillus_leucophaeus
ENSCGRG00001010676	Xrn2	97	73.632	ENSMAMG00000008633	xrn2	96	72.961	Mastacembelus_armatus
ENSCGRG00001010676	Xrn2	92	76.443	ENSMZEG00005022362	xrn2	97	76.328	Maylandia_zebra
ENSCGRG00001010676	Xrn2	99	82.641	ENSMGAG00000003196	XRN2	98	82.535	Meleagris_gallopavo
ENSCGRG00001010676	Xrn2	99	98.706	ENSMAUG00000021842	Xrn2	98	98.706	Mesocricetus_auratus
ENSCGRG00001010676	Xrn2	99	96.233	ENSMICG00000008126	XRN2	98	96.233	Microcebus_murinus
ENSCGRG00001010676	Xrn2	99	97.847	ENSMOCG00000012588	Xrn2	98	97.847	Microtus_ochrogaster
ENSCGRG00001010676	Xrn2	91	74.112	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSCGRG00001010676	Xrn2	99	90.635	ENSMODG00000006163	XRN2	98	90.635	Monodelphis_domestica
ENSCGRG00001010676	Xrn2	93	72.697	ENSMALG00000011355	xrn2	99	72.697	Monopterus_albus
ENSCGRG00001010676	Xrn2	99	97.097	MGP_CAROLIEiJ_G0024400	Xrn2	98	97.097	Mus_caroli
ENSCGRG00001010676	Xrn2	99	97.097	ENSMUSG00000027433	Xrn2	98	97.097	Mus_musculus
ENSCGRG00001010676	Xrn2	99	96.882	MGP_PahariEiJ_G0025843	Xrn2	98	96.882	Mus_pahari
ENSCGRG00001010676	Xrn2	99	97.097	MGP_SPRETEiJ_G0025318	Xrn2	98	97.097	Mus_spretus
ENSCGRG00001010676	Xrn2	99	94.503	ENSMPUG00000001198	XRN2	91	94.503	Mustela_putorius_furo
ENSCGRG00001010676	Xrn2	99	95.910	ENSMLUG00000001536	XRN2	98	95.910	Myotis_lucifugus
ENSCGRG00001010676	Xrn2	99	97.847	ENSNGAG00000018138	Xrn2	98	97.847	Nannospalax_galili
ENSCGRG00001010676	Xrn2	92	76.647	ENSNBRG00000008062	xrn2	97	76.647	Neolamprologus_brichardi
ENSCGRG00001010676	Xrn2	99	96.986	ENSNLEG00000009991	XRN2	98	96.986	Nomascus_leucogenys
ENSCGRG00001010676	Xrn2	65	97.778	ENSMEUG00000008622	-	65	97.778	Notamacropus_eugenii
ENSCGRG00001010676	Xrn2	74	79.058	ENSOPRG00000001397	-	75	79.058	Ochotona_princeps
ENSCGRG00001010676	Xrn2	99	96.017	ENSODEG00000010745	-	98	96.017	Octodon_degus
ENSCGRG00001010676	Xrn2	98	86.900	ENSODEG00000000860	-	98	87.336	Octodon_degus
ENSCGRG00001010676	Xrn2	98	73.139	ENSONIG00000018720	xrn2	96	73.069	Oreochromis_niloticus
ENSCGRG00001010676	Xrn2	99	90.461	ENSOANG00000015673	XRN2	98	90.461	Ornithorhynchus_anatinus
ENSCGRG00001010676	Xrn2	99	96.878	ENSOCUG00000013468	XRN2	98	96.878	Oryctolagus_cuniculus
ENSCGRG00001010676	Xrn2	99	71.309	ENSORLG00000017213	xrn2	97	75.635	Oryzias_latipes
ENSCGRG00001010676	Xrn2	99	71.309	ENSORLG00020001824	xrn2	99	71.204	Oryzias_latipes_hni
ENSCGRG00001010676	Xrn2	99	71.099	ENSORLG00015019747	xrn2	99	70.995	Oryzias_latipes_hsok
ENSCGRG00001010676	Xrn2	91	74.596	ENSOMEG00000019820	xrn2	96	70.179	Oryzias_melastigma
ENSCGRG00001010676	Xrn2	99	95.914	ENSOGAG00000001068	XRN2	98	95.699	Otolemur_garnettii
ENSCGRG00001010676	Xrn2	97	94.033	ENSOARG00000004443	XRN2	98	94.033	Ovis_aries
ENSCGRG00001010676	Xrn2	99	97.094	ENSPPAG00000033549	XRN2	98	97.094	Pan_paniscus
ENSCGRG00001010676	Xrn2	99	96.125	ENSPPRG00000008732	XRN2	98	96.125	Panthera_pardus
ENSCGRG00001010676	Xrn2	97	96.018	ENSPTIG00000015683	XRN2	95	96.018	Panthera_tigris_altaica
ENSCGRG00001010676	Xrn2	99	97.094	ENSPTRG00000013308	XRN2	98	97.094	Pan_troglodytes
ENSCGRG00001010676	Xrn2	99	97.097	ENSPANG00000018088	XRN2	98	97.094	Papio_anubis
ENSCGRG00001010676	Xrn2	94	74.915	ENSPKIG00000016889	xrn2	94	73.102	Paramormyrops_kingsleyae
ENSCGRG00001010676	Xrn2	82	86.719	ENSPSIG00000014666	XRN2	100	86.068	Pelodiscus_sinensis
ENSCGRG00001010676	Xrn2	99	98.170	ENSPEMG00000000111	Xrn2	98	98.170	Peromyscus_maniculatus_bairdii
ENSCGRG00001010676	Xrn2	99	71.368	ENSPFOG00000004182	xrn2	97	71.991	Poecilia_formosa
ENSCGRG00001010676	Xrn2	91	75.261	ENSPLAG00000007351	xrn2	96	75.029	Poecilia_latipinna
ENSCGRG00001010676	Xrn2	94	69.888	ENSPMEG00000011798	xrn2	97	70.358	Poecilia_mexicana
ENSCGRG00001010676	Xrn2	91	75.261	ENSPREG00000012452	xrn2	99	73.430	Poecilia_reticulata
ENSCGRG00001010676	Xrn2	99	96.555	ENSPPYG00000010755	XRN2	98	96.555	Pongo_abelii
ENSCGRG00001010676	Xrn2	99	89.796	ENSPCAG00000011191	XRN2	98	89.796	Procavia_capensis
ENSCGRG00001010676	Xrn2	99	88.913	ENSPCOG00000016468	XRN2	98	88.913	Propithecus_coquereli
ENSCGRG00001010676	Xrn2	92	94.156	ENSPVAG00000004596	XRN2	90	94.156	Pteropus_vampyrus
ENSCGRG00001010676	Xrn2	92	74.480	ENSPNYG00000001765	xrn2	97	74.365	Pundamilia_nyererei
ENSCGRG00001010676	Xrn2	100	72.245	ENSPNAG00000010956	xrn2	98	71.830	Pygocentrus_nattereri
ENSCGRG00001010676	Xrn2	99	97.634	ENSRNOG00000011785	Xrn2	98	97.634	Rattus_norvegicus
ENSCGRG00001010676	Xrn2	88	97.188	ENSRBIG00000036193	XRN2	100	97.188	Rhinopithecus_bieti
ENSCGRG00001010676	Xrn2	99	97.097	ENSRROG00000044400	XRN2	88	97.094	Rhinopithecus_roxellana
ENSCGRG00001010676	Xrn2	70	52.055	YOR048C	RAT1	63	53.606	Saccharomyces_cerevisiae
ENSCGRG00001010676	Xrn2	99	96.555	ENSSBOG00000021014	XRN2	98	96.555	Saimiri_boliviensis_boliviensis
ENSCGRG00001010676	Xrn2	100	72.842	ENSSFOG00015001091	xrn2	98	72.421	Scleropages_formosus
ENSCGRG00001010676	Xrn2	94	73.476	ENSSMAG00000007834	xrn2	96	70.421	Scophthalmus_maximus
ENSCGRG00001010676	Xrn2	93	72.398	ENSSDUG00000012802	xrn2	99	72.738	Seriola_dumerili
ENSCGRG00001010676	Xrn2	95	74.774	ENSSLDG00000021273	xrn2	100	74.661	Seriola_lalandi_dorsalis
ENSCGRG00001010676	Xrn2	76	100.000	ENSSARG00000005859	-	74	100.000	Sorex_araneus
ENSCGRG00001010676	Xrn2	99	79.189	ENSSPUG00000005485	XRN2	96	78.655	Sphenodon_punctatus
ENSCGRG00001010676	Xrn2	99	72.370	ENSSPAG00000016027	xrn2	96	72.157	Stegastes_partitus
ENSCGRG00001010676	Xrn2	99	94.618	ENSSSCG00000007109	XRN2	98	94.618	Sus_scrofa
ENSCGRG00001010676	Xrn2	99	82.002	ENSTGUG00000007535	XRN2	98	81.470	Taeniopygia_guttata
ENSCGRG00001010676	Xrn2	97	71.663	ENSTRUG00000015489	xrn2	94	70.978	Takifugu_rubripes
ENSCGRG00001010676	Xrn2	99	72.727	ENSTNIG00000010712	xrn2	97	72.727	Tetraodon_nigroviridis
ENSCGRG00001010676	Xrn2	99	95.910	ENSTBEG00000004119	XRN2	98	95.910	Tupaia_belangeri
ENSCGRG00001010676	Xrn2	93	96.216	ENSTTRG00000009087	XRN2	91	96.216	Tursiops_truncatus
ENSCGRG00001010676	Xrn2	99	96.448	ENSUAMG00000024634	XRN2	98	96.448	Ursus_americanus
ENSCGRG00001010676	Xrn2	97	96.128	ENSUMAG00000004012	XRN2	93	96.128	Ursus_maritimus
ENSCGRG00001010676	Xrn2	88	88.943	ENSVPAG00000010694	XRN2	89	88.943	Vicugna_pacos
ENSCGRG00001010676	Xrn2	99	96.233	ENSVVUG00000012178	XRN2	98	96.233	Vulpes_vulpes
ENSCGRG00001010676	Xrn2	100	74.443	ENSXETG00000023501	xrn2	98	75.080	Xenopus_tropicalis
ENSCGRG00001010676	Xrn2	99	70.288	ENSXMAG00000000242	xrn2	92	79.562	Xiphophorus_maculatus