EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001010752 (Gene tree)
Gene ID: -
Gene Symbol: 2610008E11Rik
Alias: -
Full Name: RIKEN cDNA 2610008E11 gene
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 21225 bases
Position: chrscaffold_1:101127478-101148702
Accession: 1919378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	1	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	2	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	3	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	4	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	5	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	6	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	7	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	8	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	9	10
ENSCGRP00001008480	zf-C2H2	PF00096.26	2.4e-57	10	10
ENSCGRP00001008480	zf-met	PF12874.7	3.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012609	-	1992	-	ENSCGRP00001008480	664 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001010752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001010752	2610008E11Rik	81	46.029	ENSCGRG00001012523	-	97	46.029
ENSCGRG00001010752	2610008E11Rik	60	39.706	ENSCGRG00001011389	Snai3	57	39.706
ENSCGRG00001010752	2610008E11Rik	96	56.075	ENSCGRG00001002406	Zfp39	93	56.075
ENSCGRG00001010752	2610008E11Rik	98	45.667	ENSCGRG00001007115	-	99	45.667
ENSCGRG00001010752	2610008E11Rik	61	41.379	ENSCGRG00001005125	Wt1	53	43.119
ENSCGRG00001010752	2610008E11Rik	78	35.529	ENSCGRG00001009557	Zfp319	96	34.156
ENSCGRG00001010752	2610008E11Rik	94	50.862	ENSCGRG00001010967	Zfp1	99	50.862
ENSCGRG00001010752	2610008E11Rik	74	49.704	ENSCGRG00001019468	Zfp628	60	46.890
ENSCGRG00001010752	2610008E11Rik	78	48.763	ENSCGRG00001013561	Zfp768	58	48.432
ENSCGRG00001010752	2610008E11Rik	94	47.269	ENSCGRG00001007163	-	100	47.269
ENSCGRG00001010752	2610008E11Rik	99	46.154	ENSCGRG00001000576	Zfp26	90	46.154
ENSCGRG00001010752	2610008E11Rik	95	52.542	ENSCGRG00001021088	Zfp354a	98	39.419
ENSCGRG00001010752	2610008E11Rik	94	38.462	ENSCGRG00001018100	Zfp202	63	40.370
ENSCGRG00001010752	2610008E11Rik	67	35.652	ENSCGRG00001004071	Patz1	54	30.286
ENSCGRG00001010752	2610008E11Rik	77	40.193	ENSCGRG00001019408	Zbtb17	57	40.193
ENSCGRG00001010752	2610008E11Rik	81	40.310	ENSCGRG00001012398	Zfp236	73	39.735
ENSCGRG00001010752	2610008E11Rik	77	34.921	ENSCGRG00001001429	Zfp574	87	35.038
ENSCGRG00001010752	2610008E11Rik	76	47.411	ENSCGRG00001013602	-	92	47.411
ENSCGRG00001010752	2610008E11Rik	79	35.573	ENSCGRG00001013598	Zfp865	81	31.053
ENSCGRG00001010752	2610008E11Rik	67	38.596	ENSCGRG00001008879	Maz	60	30.303
ENSCGRG00001010752	2610008E11Rik	84	38.095	ENSCGRG00001023314	-	52	38.095
ENSCGRG00001010752	2610008E11Rik	96	48.966	ENSCGRG00001024630	-	97	47.826
ENSCGRG00001010752	2610008E11Rik	59	40.351	ENSCGRG00001007749	Snai1	53	40.351
ENSCGRG00001010752	2610008E11Rik	95	49.130	ENSCGRG00001012803	-	94	49.130
ENSCGRG00001010752	2610008E11Rik	96	46.708	ENSCGRG00001024303	-	98	52.521
ENSCGRG00001010752	2610008E11Rik	76	43.280	ENSCGRG00001002297	-	94	40.702
ENSCGRG00001010752	2610008E11Rik	95	47.706	ENSCGRG00001023858	Zfp560	90	45.886
ENSCGRG00001010752	2610008E11Rik	94	44.444	ENSCGRG00001011966	Zfp715	95	44.444
ENSCGRG00001010752	2610008E11Rik	61	39.416	ENSCGRG00001013674	Snai2	53	39.416
ENSCGRG00001010752	2610008E11Rik	74	45.562	ENSCGRG00001011074	Mynn	57	42.128
ENSCGRG00001010752	2610008E11Rik	88	45.938	ENSCGRG00001017579	Zfp112	75	45.938
ENSCGRG00001010752	2610008E11Rik	60	32.420	ENSCGRG00001013279	Zfp784	67	31.944
ENSCGRG00001010752	2610008E11Rik	75	47.811	ENSCGRG00001012640	Zfp94	77	47.811
ENSCGRG00001010752	2610008E11Rik	94	57.143	ENSCGRG00001020646	Gm3854	91	57.143
ENSCGRG00001010752	2610008E11Rik	74	50.481	ENSCGRG00001013367	Zfp61	59	50.481
ENSCGRG00001010752	2610008E11Rik	74	44.712	ENSCGRG00001004047	-	76	45.517
ENSCGRG00001010752	2610008E11Rik	94	49.544	ENSCGRG00001013939	Zfp454	97	49.544
ENSCGRG00001010752	2610008E11Rik	75	39.932	ENSCGRG00001010581	Prdm5	78	39.932
ENSCGRG00001010752	2610008E11Rik	95	43.016	ENSCGRG00001001639	Zfp882	100	43.016
ENSCGRG00001010752	2610008E11Rik	74	45.610	ENSCGRG00001015424	-	66	45.610
ENSCGRG00001010752	2610008E11Rik	75	34.824	ENSCGRG00001017330	Repin1	82	36.916
ENSCGRG00001010752	2610008E11Rik	73	37.391	ENSCGRG00001023063	Zfp423	97	37.391
ENSCGRG00001010752	2610008E11Rik	76	51.773	ENSCGRG00001019143	-	88	51.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010752	2610008E11Rik	80	55.882	ENSCLAG00000001377	-	99	55.882	Chinchilla_lanigera
ENSCGRG00001010752	2610008E11Rik	99	100.000	ENSCGRG00000008922	2610008E11Rik	99	100.000	Cricetulus_griseus_crigri
ENSCGRG00001010752	2610008E11Rik	94	53.036	ENSFDAG00000005609	-	99	53.036	Fukomys_damarensis
ENSCGRG00001010752	2610008E11Rik	95	52.916	ENSFDAG00000020138	-	99	53.213	Fukomys_damarensis
ENSCGRG00001010752	2610008E11Rik	95	44.272	ENSHGLG00000001150	-	99	51.378	Heterocephalus_glaber_female
ENSCGRG00001010752	2610008E11Rik	95	53.586	ENSHGLG00100005328	-	99	53.586	Heterocephalus_glaber_male
ENSCGRG00001010752	2610008E11Rik	95	44.272	ENSHGLG00100009889	-	99	51.378	Heterocephalus_glaber_male
ENSCGRG00001010752	2610008E11Rik	100	97.139	ENSMAUG00000007597	2610008E11Rik	100	97.139	Mesocricetus_auratus
ENSCGRG00001010752	2610008E11Rik	84	86.535	ENSNGAG00000014809	2610008E11Rik	98	86.535	Nannospalax_galili
ENSCGRG00001010752	2610008E11Rik	94	55.668	ENSOCUG00000027634	-	98	55.668	Oryctolagus_cuniculus
ENSCGRG00001010752	2610008E11Rik	84	60.606	ENSRNOG00000014331	Zfp810	100	60.606	Rattus_norvegicus