EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001010801 (Gene tree)
Gene ID: -
Gene Symbol: Patl2
Alias: 4930424G05Rik|Pat1a
Full Name: protein associated with topoisomerase II homolog 2 (yeast)
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 8357 bases
Position: chrscaffold_3:32390668-32399024
Accession: 1914828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008542	PAT1	PF09770.9	8.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012671	-	1500	-	ENSCGRP00001008542	500 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001010801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010801	Patl2	100	67.803	ENSG00000229474	PATL2	93	79.697	Homo_sapiens
ENSCGRG00001010801	Patl2	80	45.098	ENSAPOG00000022988	patl2	60	45.433	Acanthochromis_polyacanthus
ENSCGRG00001010801	Patl2	73	37.401	ENSAPOG00000021290	patl1	52	37.401	Acanthochromis_polyacanthus
ENSCGRG00001010801	Patl2	89	70.905	ENSAMEG00000014997	PATL2	90	70.638	Ailuropoda_melanoleuca
ENSCGRG00001010801	Patl2	76	37.755	ENSACIG00000005182	patl1	59	36.222	Amphilophus_citrinellus
ENSCGRG00001010801	Patl2	84	43.692	ENSAOCG00000023738	patl2	57	44.266	Amphiprion_ocellaris
ENSCGRG00001010801	Patl2	73	37.401	ENSAPEG00000021391	patl1	55	35.491	Amphiprion_percula
ENSCGRG00001010801	Patl2	84	43.868	ENSAPEG00000011299	patl2	68	44.213	Amphiprion_percula
ENSCGRG00001010801	Patl2	77	44.730	ENSATEG00000019567	patl2	61	44.750	Anabas_testudineus
ENSCGRG00001010801	Patl2	55	37.543	ENSAPLG00000013394	PATL1	59	37.801	Anas_platyrhynchos
ENSCGRG00001010801	Patl2	82	51.074	ENSAPLG00000003980	PATL2	69	51.074	Anas_platyrhynchos
ENSCGRG00001010801	Patl2	62	50.462	ENSACAG00000006951	-	98	48.219	Anolis_carolinensis
ENSCGRG00001010801	Patl2	100	67.486	ENSANAG00000022701	PATL2	96	66.541	Aotus_nancymaae
ENSCGRG00001010801	Patl2	80	44.604	ENSACLG00000010326	patl2	57	44.941	Astatotilapia_calliptera
ENSCGRG00001010801	Patl2	83	44.496	ENSAMXG00000020293	patl2	60	43.571	Astyanax_mexicanus
ENSCGRG00001010801	Patl2	73	36.316	ENSAMXG00000010731	patl1	60	33.970	Astyanax_mexicanus
ENSCGRG00001010801	Patl2	66	75.152	ENSBTAG00000001558	PATL2	92	75.152	Bos_taurus
ENSCGRG00001010801	Patl2	100	67.105	ENSCJAG00000002379	PATL2	96	66.729	Callithrix_jacchus
ENSCGRG00001010801	Patl2	98	66.731	ENSCAFG00000013629	PATL2	96	66.731	Canis_familiaris
ENSCGRG00001010801	Patl2	98	67.057	ENSCAFG00020022169	PATL2	94	67.057	Canis_lupus_dingo
ENSCGRG00001010801	Patl2	99	65.680	ENSCHIG00000026665	PATL2	94	65.286	Capra_hircus
ENSCGRG00001010801	Patl2	100	66.350	ENSTSYG00000032456	PATL2	96	66.350	Carlito_syrichta
ENSCGRG00001010801	Patl2	99	64.528	ENSCPOG00000002922	PATL2	100	63.774	Cavia_porcellus
ENSCGRG00001010801	Patl2	100	67.495	ENSCCAG00000025261	PATL2	96	68.642	Cebus_capucinus
ENSCGRG00001010801	Patl2	100	67.362	ENSCATG00000034794	PATL2	93	80.000	Cercocebus_atys
ENSCGRG00001010801	Patl2	99	67.636	ENSCLAG00000014407	PATL2	99	67.248	Chinchilla_lanigera
ENSCGRG00001010801	Patl2	98	67.761	ENSCSAG00000009601	PATL2	96	69.691	Chlorocebus_sabaeus
ENSCGRG00001010801	Patl2	73	36.641	ENSCSAG00000006095	PATL1	50	38.068	Chlorocebus_sabaeus
ENSCGRG00001010801	Patl2	73	36.869	ENSCHOG00000001611	PATL1	56	38.028	Choloepus_hoffmanni
ENSCGRG00001010801	Patl2	82	52.955	ENSCPBG00000006150	PATL2	64	52.955	Chrysemys_picta_bellii
ENSCGRG00001010801	Patl2	56	32.215	ENSCSAVG00000002430	-	76	32.203	Ciona_savignyi
ENSCGRG00001010801	Patl2	100	67.939	ENSCANG00000013856	PATL2	96	69.084	Colobus_angolensis_palliatus
ENSCGRG00001010801	Patl2	100	100.000	ENSCGRG00000013007	Patl2	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001010801	Patl2	79	46.154	ENSCSEG00000009438	patl2	58	46.154	Cynoglossus_semilaevis
ENSCGRG00001010801	Patl2	73	38.196	ENSCSEG00000008261	patl1	58	36.817	Cynoglossus_semilaevis
ENSCGRG00001010801	Patl2	73	36.053	ENSCVAG00000006664	patl1	55	33.967	Cyprinodon_variegatus
ENSCGRG00001010801	Patl2	80	39.312	ENSCVAG00000016203	patl2	63	39.568	Cyprinodon_variegatus
ENSCGRG00001010801	Patl2	82	35.697	ENSDARG00000017423	patl1	50	35.279	Danio_rerio
ENSCGRG00001010801	Patl2	77	45.939	ENSDARG00000089567	patl2	56	46.269	Danio_rerio
ENSCGRG00001010801	Patl2	100	64.432	ENSDNOG00000036837	PATL2	91	64.432	Dasypus_novemcinctus
ENSCGRG00001010801	Patl2	73	36.641	ENSDNOG00000038865	PATL1	63	37.784	Dasypus_novemcinctus
ENSCGRG00001010801	Patl2	99	69.548	ENSDORG00000026649	Patl2	99	67.850	Dipodomys_ordii
ENSCGRG00001010801	Patl2	66	73.333	ENSETEG00000005068	PATL2	93	73.333	Echinops_telfairi
ENSCGRG00001010801	Patl2	89	68.319	ENSEASG00005017984	PATL2	95	65.259	Equus_asinus_asinus
ENSCGRG00001010801	Patl2	99	67.495	ENSECAG00000013462	PATL2	95	67.686	Equus_caballus
ENSCGRG00001010801	Patl2	82	45.498	ENSELUG00000023244	patl2	58	45.708	Esox_lucius
ENSCGRG00001010801	Patl2	99	67.500	ENSFCAG00000027170	PATL2	95	67.308	Felis_catus
ENSCGRG00001010801	Patl2	82	52.246	ENSFALG00000009768	PATL2	59	52.482	Ficedula_albicollis
ENSCGRG00001010801	Patl2	100	65.243	ENSFDAG00000012242	PATL2	100	65.184	Fukomys_damarensis
ENSCGRG00001010801	Patl2	58	42.088	ENSFHEG00000009727	patl2	57	42.000	Fundulus_heteroclitus
ENSCGRG00001010801	Patl2	80	41.446	ENSGMOG00000005666	patl2	98	42.260	Gadus_morhua
ENSCGRG00001010801	Patl2	82	51.306	ENSGALG00000002167	PATL2	53	51.306	Gallus_gallus
ENSCGRG00001010801	Patl2	84	44.444	ENSGAFG00000019344	patl2	62	44.773	Gambusia_affinis
ENSCGRG00001010801	Patl2	73	38.320	ENSGACG00000016448	patl1	50	38.320	Gasterosteus_aculeatus
ENSCGRG00001010801	Patl2	73	36.548	ENSGAGG00000004461	PATL1	50	37.500	Gopherus_agassizii
ENSCGRG00001010801	Patl2	100	68.121	ENSGGOG00000025923	PATL2	96	69.070	Gorilla_gorilla
ENSCGRG00001010801	Patl2	73	37.302	ENSHBUG00000005365	patl1	52	35.268	Haplochromis_burtoni
ENSCGRG00001010801	Patl2	80	44.552	ENSHBUG00000005929	patl2	65	44.681	Haplochromis_burtoni
ENSCGRG00001010801	Patl2	100	66.157	ENSHGLG00000017415	-	100	65.392	Heterocephalus_glaber_female
ENSCGRG00001010801	Patl2	100	65.530	ENSHGLG00100008419	-	100	64.773	Heterocephalus_glaber_male
ENSCGRG00001010801	Patl2	73	36.074	ENSHCOG00000001898	patl1	50	34.679	Hippocampus_comes
ENSCGRG00001010801	Patl2	80	44.634	ENSHCOG00000016754	patl2	57	44.976	Hippocampus_comes
ENSCGRG00001010801	Patl2	82	44.340	ENSIPUG00000020692	patl2	60	43.357	Ictalurus_punctatus
ENSCGRG00001010801	Patl2	100	69.714	ENSSTOG00000033848	PATL2	96	69.714	Ictidomys_tridecemlineatus
ENSCGRG00001010801	Patl2	82	42.654	ENSKMAG00000021275	patl2	58	43.023	Kryptolebias_marmoratus
ENSCGRG00001010801	Patl2	77	44.836	ENSLBEG00000022344	patl2	54	45.185	Labrus_bergylta
ENSCGRG00001010801	Patl2	82	44.394	ENSLACG00000005291	-	57	43.304	Latimeria_chalumnae
ENSCGRG00001010801	Patl2	99	65.019	ENSLAFG00000031124	PATL2	98	64.449	Loxodonta_africana
ENSCGRG00001010801	Patl2	100	67.742	ENSMFAG00000003565	PATL2	96	69.070	Macaca_fascicularis
ENSCGRG00001010801	Patl2	66	79.697	ENSMMUG00000014294	PATL2	93	79.697	Macaca_mulatta
ENSCGRG00001010801	Patl2	100	67.552	ENSMNEG00000034510	PATL2	96	69.829	Macaca_nemestrina
ENSCGRG00001010801	Patl2	100	69.070	ENSMLEG00000042248	PATL2	96	69.450	Mandrillus_leucophaeus
ENSCGRG00001010801	Patl2	87	40.517	ENSMAMG00000013327	patl2	73	40.890	Mastacembelus_armatus
ENSCGRG00001010801	Patl2	80	44.604	ENSMZEG00005014292	patl2	57	44.941	Maylandia_zebra
ENSCGRG00001010801	Patl2	83	50.597	ENSMGAG00000001309	PATL2	69	51.551	Meleagris_gallopavo
ENSCGRG00001010801	Patl2	100	90.476	ENSMAUG00000001008	Patl2	96	90.476	Mesocricetus_auratus
ENSCGRG00001010801	Patl2	66	78.485	ENSMICG00000005037	PATL2	93	78.485	Microcebus_murinus
ENSCGRG00001010801	Patl2	100	83.984	ENSMOCG00000015367	Patl2	98	83.398	Microtus_ochrogaster
ENSCGRG00001010801	Patl2	82	35.392	ENSMMOG00000013711	patl1	58	35.392	Mola_mola
ENSCGRG00001010801	Patl2	65	43.413	ENSMMOG00000001299	patl2	60	39.750	Mola_mola
ENSCGRG00001010801	Patl2	88	64.026	ENSMODG00000017690	PATL2	84	64.059	Monodelphis_domestica
ENSCGRG00001010801	Patl2	78	44.169	ENSMALG00000008131	patl2	54	44.286	Monopterus_albus
ENSCGRG00001010801	Patl2	100	78.626	MGP_CAROLIEiJ_G0024205	Patl2	98	78.626	Mus_caroli
ENSCGRG00001010801	Patl2	100	79.119	ENSMUSG00000027233	Patl2	98	78.161	Mus_musculus
ENSCGRG00001010801	Patl2	100	78.352	MGP_PahariEiJ_G0025648	Patl2	98	77.586	Mus_pahari
ENSCGRG00001010801	Patl2	100	78.585	MGP_SPRETEiJ_G0025122	Patl2	98	77.820	Mus_spretus
ENSCGRG00001010801	Patl2	99	65.177	ENSNGAG00000020368	Patl2	99	64.312	Nannospalax_galili
ENSCGRG00001010801	Patl2	80	43.826	ENSNBRG00000011745	patl2	62	43.972	Neolamprologus_brichardi
ENSCGRG00001010801	Patl2	100	69.656	ENSNLEG00000005673	PATL2	96	69.656	Nomascus_leucogenys
ENSCGRG00001010801	Patl2	67	37.500	ENSOPRG00000007963	PATL1	53	38.068	Ochotona_princeps
ENSCGRG00001010801	Patl2	73	37.302	ENSONIG00000004170	patl1	52	35.268	Oreochromis_niloticus
ENSCGRG00001010801	Patl2	80	44.737	ENSONIG00000011519	patl2	57	45.070	Oreochromis_niloticus
ENSCGRG00001010801	Patl2	67	37.536	ENSOANG00000011117	-	85	37.784	Ornithorhynchus_anatinus
ENSCGRG00001010801	Patl2	81	60.192	ENSOANG00000001538	-	94	60.192	Ornithorhynchus_anatinus
ENSCGRG00001010801	Patl2	99	66.092	ENSOCUG00000006339	PATL2	98	65.900	Oryctolagus_cuniculus
ENSCGRG00001010801	Patl2	80	43.204	ENSORLG00000005780	patl2	57	43.571	Oryzias_latipes
ENSCGRG00001010801	Patl2	81	43.437	ENSORLG00020016506	patl2	56	43.794	Oryzias_latipes_hni
ENSCGRG00001010801	Patl2	65	38.643	ENSORLG00015022240	patl1	56	35.141	Oryzias_latipes_hsok
ENSCGRG00001010801	Patl2	77	44.081	ENSORLG00015014500	patl2	55	44.444	Oryzias_latipes_hsok
ENSCGRG00001010801	Patl2	74	44.386	ENSOMEG00000021628	patl2	62	42.727	Oryzias_melastigma
ENSCGRG00001010801	Patl2	97	66.601	ENSOGAG00000004709	PATL2	95	66.089	Otolemur_garnettii
ENSCGRG00001010801	Patl2	99	62.030	ENSOARG00000003762	PATL2	98	62.030	Ovis_aries
ENSCGRG00001010801	Patl2	100	67.547	ENSPPAG00000007221	PATL2	96	68.302	Pan_paniscus
ENSCGRG00001010801	Patl2	100	66.795	ENSPPRG00000004279	PATL2	96	66.795	Panthera_pardus
ENSCGRG00001010801	Patl2	100	67.179	ENSPTIG00000018964	PATL2	96	66.987	Panthera_tigris_altaica
ENSCGRG00001010801	Patl2	100	67.736	ENSPTRG00000041536	PATL2	96	68.491	Pan_troglodytes
ENSCGRG00001010801	Patl2	100	67.871	ENSPANG00000018026	PATL2	96	69.772	Papio_anubis
ENSCGRG00001010801	Patl2	73	45.358	ENSPKIG00000016887	patl2	55	45.343	Paramormyrops_kingsleyae
ENSCGRG00001010801	Patl2	73	37.234	ENSPKIG00000016224	patl1	50	37.234	Paramormyrops_kingsleyae
ENSCGRG00001010801	Patl2	90	45.436	ENSPSIG00000017690	PATL2	98	48.232	Pelodiscus_sinensis
ENSCGRG00001010801	Patl2	77	41.960	ENSPMGG00000014550	patl2	63	42.365	Periophthalmus_magnuspinnatus
ENSCGRG00001010801	Patl2	99	84.344	ENSPEMG00000016509	Patl2	98	83.757	Peromyscus_maniculatus_bairdii
ENSCGRG00001010801	Patl2	88	66.063	ENSPCIG00000018256	PATL2	89	65.179	Phascolarctos_cinereus
ENSCGRG00001010801	Patl2	76	38.010	ENSPFOG00000007768	patl1	50	38.010	Poecilia_formosa
ENSCGRG00001010801	Patl2	84	43.981	ENSPFOG00000007305	patl2	60	44.318	Poecilia_formosa
ENSCGRG00001010801	Patl2	84	43.981	ENSPLAG00000020713	patl2	60	44.318	Poecilia_latipinna
ENSCGRG00001010801	Patl2	84	43.981	ENSPMEG00000018942	patl2	60	44.318	Poecilia_mexicana
ENSCGRG00001010801	Patl2	73	42.857	ENSPREG00000023066	patl2	61	42.487	Poecilia_reticulata
ENSCGRG00001010801	Patl2	100	67.641	ENSPCOG00000000295	PATL2	93	78.485	Propithecus_coquereli
ENSCGRG00001010801	Patl2	80	44.310	ENSPNYG00000017381	patl2	65	44.444	Pundamilia_nyererei
ENSCGRG00001010801	Patl2	83	44.976	ENSPNAG00000002315	patl2	61	43.590	Pygocentrus_nattereri
ENSCGRG00001010801	Patl2	73	37.037	ENSPNAG00000017907	patl1	51	36.038	Pygocentrus_nattereri
ENSCGRG00001010801	Patl2	99	77.756	ENSRNOG00000017061	Patl2	98	76.596	Rattus_norvegicus
ENSCGRG00001010801	Patl2	100	66.414	ENSRBIG00000040369	PATL2	96	68.121	Rhinopithecus_bieti
ENSCGRG00001010801	Patl2	100	66.603	ENSRROG00000028786	PATL2	96	68.311	Rhinopithecus_roxellana
ENSCGRG00001010801	Patl2	100	65.472	ENSSBOG00000034766	PATL2	96	66.290	Saimiri_boliviensis_boliviensis
ENSCGRG00001010801	Patl2	74	36.772	ENSSFOG00015009614	patl1	54	35.952	Scleropages_formosus
ENSCGRG00001010801	Patl2	75	44.359	ENSSFOG00015000720	patl2	56	45.098	Scleropages_formosus
ENSCGRG00001010801	Patl2	81	44.181	ENSSMAG00000017262	patl2	64	42.787	Scophthalmus_maximus
ENSCGRG00001010801	Patl2	77	44.332	ENSSDUG00000022927	patl2	55	44.691	Seriola_dumerili
ENSCGRG00001010801	Patl2	76	37.150	ENSSDUG00000005362	patl1	51	35.635	Seriola_dumerili
ENSCGRG00001010801	Patl2	77	43.467	ENSSLDG00000017922	patl2	59	43.842	Seriola_lalandi_dorsalis
ENSCGRG00001010801	Patl2	76	37.150	ENSSLDG00000019146	patl1	54	35.412	Seriola_lalandi_dorsalis
ENSCGRG00001010801	Patl2	92	65.560	ENSSARG00000009047	PATL2	96	66.170	Sorex_araneus
ENSCGRG00001010801	Patl2	64	54.128	ENSSPUG00000019065	PATL2	94	54.762	Sphenodon_punctatus
ENSCGRG00001010801	Patl2	80	41.505	ENSSPAG00000004784	patl2	62	41.905	Stegastes_partitus
ENSCGRG00001010801	Patl2	73	35.550	ENSSSCG00000013124	PATL1	52	37.143	Sus_scrofa
ENSCGRG00001010801	Patl2	74	53.906	ENSTGUG00000004619	-	98	53.906	Taeniopygia_guttata
ENSCGRG00001010801	Patl2	84	42.361	ENSTRUG00000005647	patl2	60	42.727	Takifugu_rubripes
ENSCGRG00001010801	Patl2	67	38.068	ENSTTRG00000009389	PATL1	53	38.068	Tursiops_truncatus
ENSCGRG00001010801	Patl2	100	66.917	ENSUAMG00000018533	PATL2	96	66.792	Ursus_americanus
ENSCGRG00001010801	Patl2	73	35.878	ENSUMAG00000018634	PATL1	51	37.216	Ursus_maritimus
ENSCGRG00001010801	Patl2	100	66.917	ENSUMAG00000007738	PATL2	96	66.792	Ursus_maritimus
ENSCGRG00001010801	Patl2	73	36.387	ENSVVUG00000016668	PATL1	50	37.784	Vulpes_vulpes
ENSCGRG00001010801	Patl2	97	66.211	ENSVVUG00000011576	PATL2	87	69.149	Vulpes_vulpes
ENSCGRG00001010801	Patl2	82	44.394	ENSXETG00000014167	patl2	71	45.093	Xenopus_tropicalis
ENSCGRG00001010801	Patl2	73	37.467	ENSXCOG00000010808	patl1	66	37.995	Xiphophorus_couchianus
ENSCGRG00001010801	Patl2	84	43.981	ENSXMAG00000018464	patl2	60	44.318	Xiphophorus_maculatus