EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001010861 (Gene tree)
Gene ID: -
Gene Symbol: Synj1
Alias: A930006D20Rik
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 73182 bases
Position: chrscaffold_8:65694845-65768026
Accession: 100757174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008688	Exo_endo_phos	PF03372.23	1.4e-14	1	1
ENSCGRP00001008670	Exo_endo_phos	PF03372.23	1.8e-14	1	1
ENSCGRP00001008665	Exo_endo_phos	PF03372.23	1.9e-14	1	1
ENSCGRP00001008688	DUF1866	PF08952.11	3e-57	1	1
ENSCGRP00001008670	DUF1866	PF08952.11	3.2e-57	1	1
ENSCGRP00001008665	DUF1866	PF08952.11	3.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012798	-	4800	-	ENSCGRP00001008665	1599 (aa)	-	-
ENSCGRT00001012803	-	4696	-	ENSCGRP00001008670	1557 (aa)	XP_007640198	UPI0004549577
ENSCGRT00001012823	-	3927	-	ENSCGRP00001008688	1308 (aa)	-	UPI00022F34F2

Gene Model

Click here to download ENSCGRG00001010861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001010861	Synj1	99	47.404	ENSCGRG00001004257	Synj2	88	53.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010861	Synj1	100	93.745	ENSG00000159082	SYNJ1	100	96.835	Homo_sapiens
ENSCGRG00001010861	Synj1	83	75.752	ENSAPOG00000002809	synj1	92	70.908	Acanthochromis_polyacanthus
ENSCGRG00001010861	Synj1	99	92.715	ENSAMEG00000015028	SYNJ1	98	87.223	Ailuropoda_melanoleuca
ENSCGRG00001010861	Synj1	99	67.122	ENSACIG00000008857	synj1	99	66.418	Amphilophus_citrinellus
ENSCGRG00001010861	Synj1	100	65.243	ENSAOCG00000009835	synj1	99	69.792	Amphiprion_ocellaris
ENSCGRG00001010861	Synj1	83	74.818	ENSAPEG00000021010	synj1	87	65.220	Amphiprion_percula
ENSCGRG00001010861	Synj1	99	68.120	ENSATEG00000002306	synj1	93	59.024	Anabas_testudineus
ENSCGRG00001010861	Synj1	100	84.534	ENSAPLG00000011832	SYNJ1	100	77.687	Anas_platyrhynchos
ENSCGRG00001010861	Synj1	100	82.864	ENSACAG00000003006	-	100	82.864	Anolis_carolinensis
ENSCGRG00001010861	Synj1	100	93.826	ENSANAG00000027325	SYNJ1	100	92.683	Aotus_nancymaae
ENSCGRG00001010861	Synj1	100	67.502	ENSACLG00000002255	synj1	99	69.115	Astatotilapia_calliptera
ENSCGRG00001010861	Synj1	83	76.208	ENSAMXG00000008208	synj1	83	69.469	Astyanax_mexicanus
ENSCGRG00001010861	Synj1	99	91.884	ENSBTAG00000003063	SYNJ1	100	91.433	Bos_taurus
ENSCGRG00001010861	Synj1	100	93.521	ENSCJAG00000009187	SYNJ1	100	92.378	Callithrix_jacchus
ENSCGRG00001010861	Synj1	99	92.331	ENSCAFG00000009041	SYNJ1	99	91.984	Canis_familiaris
ENSCGRG00001010861	Synj1	99	89.135	ENSCAFG00020025776	SYNJ1	98	87.328	Canis_lupus_dingo
ENSCGRG00001010861	Synj1	99	90.115	ENSCHIG00000005095	SYNJ1	100	84.517	Capra_hircus
ENSCGRG00001010861	Synj1	100	92.982	ENSTSYG00000014541	SYNJ1	100	91.838	Carlito_syrichta
ENSCGRG00001010861	Synj1	97	74.883	ENSCAPG00000014483	SYNJ1	99	79.553	Cavia_aperea
ENSCGRG00001010861	Synj1	100	93.059	ENSCPOG00000012182	SYNJ1	100	93.059	Cavia_porcellus
ENSCGRG00001010861	Synj1	100	93.445	ENSCCAG00000020825	SYNJ1	100	92.302	Cebus_capucinus
ENSCGRG00001010861	Synj1	100	93.745	ENSCATG00000033891	SYNJ1	100	92.601	Cercocebus_atys
ENSCGRG00001010861	Synj1	100	93.745	ENSCLAG00000009796	SYNJ1	100	96.681	Chinchilla_lanigera
ENSCGRG00001010861	Synj1	100	93.593	ENSCSAG00000009654	SYNJ1	100	93.593	Chlorocebus_sabaeus
ENSCGRG00001010861	Synj1	82	90.554	ENSCHOG00000012390	SYNJ1	86	90.554	Choloepus_hoffmanni
ENSCGRG00001010861	Synj1	94	86.974	ENSCPBG00000006402	SYNJ1	97	86.974	Chrysemys_picta_bellii
ENSCGRG00001010861	Synj1	100	93.745	ENSCANG00000031359	SYNJ1	100	92.601	Colobus_angolensis_palliatus
ENSCGRG00001010861	Synj1	100	100.000	ENSCGRG00000015749	Synj1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001010861	Synj1	83	75.752	ENSCSEG00000019614	synj1	99	70.478	Cynoglossus_semilaevis
ENSCGRG00001010861	Synj1	83	73.399	ENSCVAG00000019250	synj1	93	69.773	Cyprinodon_variegatus
ENSCGRG00001010861	Synj1	84	76.375	ENSDARG00000025011	synj1	100	70.173	Danio_rerio
ENSCGRG00001010861	Synj1	98	88.742	ENSDNOG00000010732	SYNJ1	99	82.334	Dasypus_novemcinctus
ENSCGRG00001010861	Synj1	53	95.150	ENSDORG00000014735	-	100	96.681	Dipodomys_ordii
ENSCGRG00001010861	Synj1	86	95.726	ENSETEG00000018674	SYNJ1	73	95.726	Echinops_telfairi
ENSCGRG00001010861	Synj1	99	91.667	ENSEASG00005006287	SYNJ1	98	94.549	Equus_asinus_asinus
ENSCGRG00001010861	Synj1	99	92.830	ENSECAG00000004829	SYNJ1	99	93.090	Equus_caballus
ENSCGRG00001010861	Synj1	91	86.867	ENSEEUG00000005150	SYNJ1	95	86.867	Erinaceus_europaeus
ENSCGRG00001010861	Synj1	99	64.811	ENSELUG00000009731	synj1	89	66.909	Esox_lucius
ENSCGRG00001010861	Synj1	99	91.821	ENSFCAG00000012498	SYNJ1	100	91.400	Felis_catus
ENSCGRG00001010861	Synj1	74	77.732	ENSFALG00000004680	SYNJ1	100	69.697	Ficedula_albicollis
ENSCGRG00001010861	Synj1	100	93.364	ENSFDAG00000016818	SYNJ1	100	97.114	Fukomys_damarensis
ENSCGRG00001010861	Synj1	99	68.276	ENSFHEG00000017689	synj1	96	61.336	Fundulus_heteroclitus
ENSCGRG00001010861	Synj1	77	72.493	ENSGMOG00000014852	synj1	77	72.130	Gadus_morhua
ENSCGRG00001010861	Synj1	100	75.739	ENSGALG00000034317	SYNJ1	100	75.660	Gallus_gallus
ENSCGRG00001010861	Synj1	99	68.103	ENSGAFG00000019466	synj1	82	68.782	Gambusia_affinis
ENSCGRG00001010861	Synj1	99	63.094	ENSGACG00000020575	synj1	89	68.880	Gasterosteus_aculeatus
ENSCGRG00001010861	Synj1	100	84.575	ENSGAGG00000022523	SYNJ1	100	84.887	Gopherus_agassizii
ENSCGRG00001010861	Synj1	100	93.516	ENSGGOG00000015945	SYNJ1	99	93.561	Gorilla_gorilla
ENSCGRG00001010861	Synj1	100	67.502	ENSHBUG00000007774	synj1	99	69.115	Haplochromis_burtoni
ENSCGRG00001010861	Synj1	100	93.211	ENSHGLG00000006420	SYNJ1	100	97.114	Heterocephalus_glaber_female
ENSCGRG00001010861	Synj1	99	93.180	ENSHGLG00100012591	SYNJ1	100	97.114	Heterocephalus_glaber_male
ENSCGRG00001010861	Synj1	99	63.484	ENSHCOG00000012774	synj1	96	65.640	Hippocampus_comes
ENSCGRG00001010861	Synj1	99	69.678	ENSIPUG00000010691	SYNJ1	95	63.250	Ictalurus_punctatus
ENSCGRG00001010861	Synj1	100	94.737	ENSSTOG00000015806	SYNJ1	100	94.737	Ictidomys_tridecemlineatus
ENSCGRG00001010861	Synj1	99	88.159	ENSJJAG00000020168	Synj1	100	83.481	Jaculus_jaculus
ENSCGRG00001010861	Synj1	86	72.405	ENSKMAG00000004221	synj1	96	71.968	Kryptolebias_marmoratus
ENSCGRG00001010861	Synj1	82	74.278	ENSLBEG00000015081	synj1	96	62.330	Labrus_bergylta
ENSCGRG00001010861	Synj1	100	76.133	ENSLACG00000005928	SYNJ1	98	69.669	Latimeria_chalumnae
ENSCGRG00001010861	Synj1	100	76.702	ENSLOCG00000009230	synj1	100	69.452	Lepisosteus_oculatus
ENSCGRG00001010861	Synj1	99	92.107	ENSLAFG00000011806	SYNJ1	100	84.306	Loxodonta_africana
ENSCGRG00001010861	Synj1	98	92.818	ENSMFAG00000018883	SYNJ1	99	93.470	Macaca_fascicularis
ENSCGRG00001010861	Synj1	100	93.455	ENSMMUG00000004624	SYNJ1	100	93.455	Macaca_mulatta
ENSCGRG00001010861	Synj1	100	93.669	ENSMNEG00000040077	SYNJ1	94	93.669	Macaca_nemestrina
ENSCGRG00001010861	Synj1	100	93.745	ENSMLEG00000037029	SYNJ1	100	92.601	Mandrillus_leucophaeus
ENSCGRG00001010861	Synj1	83	75.658	ENSMAMG00000013404	synj1	88	65.880	Mastacembelus_armatus
ENSCGRG00001010861	Synj1	83	75.273	ENSMZEG00005024358	synj1	99	69.811	Maylandia_zebra
ENSCGRG00001010861	Synj1	100	83.825	ENSMGAG00000014522	SYNJ1	100	76.976	Meleagris_gallopavo
ENSCGRG00001010861	Synj1	100	97.095	ENSMAUG00000009743	Synj1	100	97.980	Mesocricetus_auratus
ENSCGRG00001010861	Synj1	100	93.440	ENSMICG00000034953	SYNJ1	99	93.243	Microcebus_murinus
ENSCGRG00001010861	Synj1	99	67.145	ENSMMOG00000010203	synj1	99	67.069	Mola_mola
ENSCGRG00001010861	Synj1	99	80.092	ENSMODG00000021073	SYNJ1	100	79.939	Monodelphis_domestica
ENSCGRG00001010861	Synj1	99	68.033	ENSMALG00000014015	synj1	88	64.386	Monopterus_albus
ENSCGRG00001010861	Synj1	100	95.646	MGP_CAROLIEiJ_G0020951	Synj1	100	97.691	Mus_caroli
ENSCGRG00001010861	Synj1	100	96.104	ENSMUSG00000022973	Synj1	100	98.124	Mus_musculus
ENSCGRG00001010861	Synj1	100	96.333	MGP_PahariEiJ_G0016656	Synj1	100	98.124	Mus_pahari
ENSCGRG00001010861	Synj1	100	96.180	MGP_SPRETEiJ_G0021857	Synj1	100	98.413	Mus_spretus
ENSCGRG00001010861	Synj1	99	92.601	ENSMPUG00000001153	SYNJ1	100	86.932	Mustela_putorius_furo
ENSCGRG00001010861	Synj1	52	94.370	ENSMLUG00000026584	-	100	94.370	Myotis_lucifugus
ENSCGRG00001010861	Synj1	62	83.088	ENSMLUG00000005764	-	100	72.207	Myotis_lucifugus
ENSCGRG00001010861	Synj1	100	95.031	ENSNGAG00000000453	Synj1	100	96.970	Nannospalax_galili
ENSCGRG00001010861	Synj1	83	71.662	ENSNBRG00000011936	synj1	95	58.839	Neolamprologus_brichardi
ENSCGRG00001010861	Synj1	88	89.494	ENSNLEG00000003734	SYNJ1	100	88.061	Nomascus_leucogenys
ENSCGRG00001010861	Synj1	88	76.660	ENSMEUG00000004158	-	73	76.660	Notamacropus_eugenii
ENSCGRG00001010861	Synj1	93	91.130	ENSOPRG00000013602	SYNJ1	93	92.439	Ochotona_princeps
ENSCGRG00001010861	Synj1	53	95.720	ENSODEG00000002409	-	100	97.114	Octodon_degus
ENSCGRG00001010861	Synj1	99	70.130	ENSONIG00000004667	synj1	100	66.990	Oreochromis_niloticus
ENSCGRG00001010861	Synj1	97	84.681	ENSOANG00000006929	SYNJ1	96	77.763	Ornithorhynchus_anatinus
ENSCGRG00001010861	Synj1	99	89.518	ENSOCUG00000001420	SYNJ1	100	84.430	Oryctolagus_cuniculus
ENSCGRG00001010861	Synj1	83	75.319	ENSORLG00000004320	synj1	100	66.207	Oryzias_latipes
ENSCGRG00001010861	Synj1	83	73.479	ENSORLG00020011994	synj1	98	67.444	Oryzias_latipes_hni
ENSCGRG00001010861	Synj1	83	75.023	ENSORLG00015018077	synj1	80	68.565	Oryzias_latipes_hsok
ENSCGRG00001010861	Synj1	83	74.932	ENSOMEG00000014322	synj1	99	67.783	Oryzias_melastigma
ENSCGRG00001010861	Synj1	100	88.847	ENSOGAG00000006010	SYNJ1	98	84.591	Otolemur_garnettii
ENSCGRG00001010861	Synj1	99	91.159	ENSOARG00000013414	SYNJ1	98	85.094	Ovis_aries
ENSCGRG00001010861	Synj1	100	93.822	ENSPPAG00000026784	SYNJ1	100	92.677	Pan_paniscus
ENSCGRG00001010861	Synj1	99	92.978	ENSPPRG00000023469	SYNJ1	100	91.553	Panthera_pardus
ENSCGRG00001010861	Synj1	99	92.978	ENSPTIG00000007930	SYNJ1	100	91.476	Panthera_tigris_altaica
ENSCGRG00001010861	Synj1	100	93.822	ENSPTRG00000023787	SYNJ1	99	93.720	Pan_troglodytes
ENSCGRG00001010861	Synj1	100	89.726	ENSPTRG00000048135	-	99	93.720	Pan_troglodytes
ENSCGRG00001010861	Synj1	100	93.745	ENSPANG00000022531	SYNJ1	100	93.745	Papio_anubis
ENSCGRG00001010861	Synj1	88	77.003	ENSPKIG00000022603	synj1	95	75.500	Paramormyrops_kingsleyae
ENSCGRG00001010861	Synj1	83	75.159	ENSPMGG00000016831	synj1	90	67.124	Periophthalmus_magnuspinnatus
ENSCGRG00001010861	Synj1	100	96.407	ENSPEMG00000018767	Synj1	100	98.124	Peromyscus_maniculatus_bairdii
ENSCGRG00001010861	Synj1	78	61.213	ENSPMAG00000002887	synj1	96	53.359	Petromyzon_marinus
ENSCGRG00001010861	Synj1	99	85.310	ENSPCIG00000016372	SYNJ1	100	85.432	Phascolarctos_cinereus
ENSCGRG00001010861	Synj1	84	75.339	ENSPFOG00000016886	synj1	100	65.945	Poecilia_formosa
ENSCGRG00001010861	Synj1	100	63.184	ENSPLAG00000017559	synj1	99	68.363	Poecilia_latipinna
ENSCGRG00001010861	Synj1	99	65.106	ENSPMEG00000007643	synj1	79	67.290	Poecilia_mexicana
ENSCGRG00001010861	Synj1	100	66.225	ENSPREG00000012412	synj1	98	69.114	Poecilia_reticulata
ENSCGRG00001010861	Synj1	99	93.211	ENSPPYG00000011365	SYNJ1	96	92.681	Pongo_abelii
ENSCGRG00001010861	Synj1	86	91.429	ENSPCAG00000009906	SYNJ1	89	91.429	Procavia_capensis
ENSCGRG00001010861	Synj1	93	89.223	ENSPCOG00000024841	SYNJ1	96	89.216	Propithecus_coquereli
ENSCGRG00001010861	Synj1	99	87.969	ENSPVAG00000000892	SYNJ1	100	82.636	Pteropus_vampyrus
ENSCGRG00001010861	Synj1	83	74.135	ENSPNYG00000022989	synj1	100	65.784	Pundamilia_nyererei
ENSCGRG00001010861	Synj1	84	76.337	ENSPNAG00000021119	synj1	91	76.337	Pygocentrus_nattereri
ENSCGRG00001010861	Synj1	100	95.795	ENSRNOG00000002051	Synj1	100	95.576	Rattus_norvegicus
ENSCGRG00001010861	Synj1	100	93.669	ENSRBIG00000034477	SYNJ1	100	92.525	Rhinopithecus_bieti
ENSCGRG00001010861	Synj1	100	93.745	ENSRROG00000039256	SYNJ1	100	92.601	Rhinopithecus_roxellana
ENSCGRG00001010861	Synj1	100	93.598	ENSSBOG00000021001	SYNJ1	100	92.454	Saimiri_boliviensis_boliviensis
ENSCGRG00001010861	Synj1	99	83.156	ENSSHAG00000008538	SYNJ1	99	76.700	Sarcophilus_harrisii
ENSCGRG00001010861	Synj1	100	69.806	ENSSFOG00015006095	synj1	95	61.757	Scleropages_formosus
ENSCGRG00001010861	Synj1	99	66.052	ENSSMAG00000018066	synj1	99	67.754	Scophthalmus_maximus
ENSCGRG00001010861	Synj1	83	75.386	ENSSDUG00000013058	synj1	88	65.191	Seriola_dumerili
ENSCGRG00001010861	Synj1	83	76.047	ENSSLDG00000021406	synj1	96	70.515	Seriola_lalandi_dorsalis
ENSCGRG00001010861	Synj1	68	95.301	ENSSARG00000009490	SYNJ1	73	95.301	Sorex_araneus
ENSCGRG00001010861	Synj1	100	81.417	ENSSPUG00000012552	SYNJ1	94	77.822	Sphenodon_punctatus
ENSCGRG00001010861	Synj1	78	74.489	ENSSPAG00000006812	SYNJ1	81	68.006	Stegastes_partitus
ENSCGRG00001010861	Synj1	83	75.000	ENSSPAG00000017029	synj1	98	65.125	Stegastes_partitus
ENSCGRG00001010861	Synj1	100	91.812	ENSSSCG00000012035	SYNJ1	100	91.964	Sus_scrofa
ENSCGRG00001010861	Synj1	100	83.700	ENSTGUG00000013445	SYNJ1	100	76.430	Taeniopygia_guttata
ENSCGRG00001010861	Synj1	86	72.928	ENSTRUG00000006907	synj1	99	65.850	Takifugu_rubripes
ENSCGRG00001010861	Synj1	99	68.151	ENSTNIG00000009940	synj1	100	65.841	Tetraodon_nigroviridis
ENSCGRG00001010861	Synj1	93	85.474	ENSTBEG00000016298	SYNJ1	92	86.265	Tupaia_belangeri
ENSCGRG00001010861	Synj1	99	83.948	ENSTTRG00000002222	SYNJ1	100	77.434	Tursiops_truncatus
ENSCGRG00001010861	Synj1	99	88.574	ENSUAMG00000018606	SYNJ1	99	95.816	Ursus_americanus
ENSCGRG00001010861	Synj1	98	93.796	ENSUMAG00000018419	SYNJ1	99	95.816	Ursus_maritimus
ENSCGRG00001010861	Synj1	87	97.143	ENSVPAG00000001241	SYNJ1	87	97.143	Vicugna_pacos
ENSCGRG00001010861	Synj1	100	93.053	ENSVVUG00000023125	SYNJ1	100	93.053	Vulpes_vulpes
ENSCGRG00001010861	Synj1	100	77.978	ENSXETG00000009899	synj1	100	68.614	Xenopus_tropicalis
ENSCGRG00001010861	Synj1	83	75.477	ENSXCOG00000011896	synj1	99	69.947	Xiphophorus_couchianus
ENSCGRG00001010861	Synj1	84	75.475	ENSXMAG00000017524	synj1	100	69.294	Xiphophorus_maculatus