EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001010889 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 28144 bases
Position: chrscaffold_33:71285-99428
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008637	Nop52	PF05997.12	5.2e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012767	-	3335	-	ENSCGRP00001008637	745 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001010889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001010889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001010889	-	100	99.329	ENSCGRG00001023882	-	100	99.329

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001010889	-	100	65.921	ENSG00000160208	RRP1B	100	65.921	Homo_sapiens
ENSCGRG00001010889	-	64	49.219	ENSAPOG00000007490	-	51	46.575	Acanthochromis_polyacanthus
ENSCGRG00001010889	-	55	67.797	ENSAMEG00000011401	RRP1B	98	55.946	Ailuropoda_melanoleuca
ENSCGRG00001010889	-	58	51.351	ENSAOCG00000017894	-	95	53.425	Amphiprion_ocellaris
ENSCGRG00001010889	-	64	46.875	ENSAPEG00000024150	-	51	46.207	Amphiprion_percula
ENSCGRG00001010889	-	66	50.420	ENSATEG00000005045	-	50	50.420	Anabas_testudineus
ENSCGRG00001010889	-	94	42.895	ENSAPLG00000004310	RRP1B	100	43.338	Anas_platyrhynchos
ENSCGRG00001010889	-	100	63.732	ENSANAG00000034889	RRP1B	100	63.732	Aotus_nancymaae
ENSCGRG00001010889	-	100	59.235	ENSBTAG00000017418	RRP1B	100	59.235	Bos_taurus
ENSCGRG00001010889	-	50	51.187	ENSCJAG00000043205	RRP1	67	55.120	Callithrix_jacchus
ENSCGRG00001010889	-	100	62.978	ENSCJAG00000017077	RRP1B	100	62.978	Callithrix_jacchus
ENSCGRG00001010889	-	94	59.605	ENSCAFG00000010621	RRP1B	99	60.508	Canis_familiaris
ENSCGRG00001010889	-	100	60.027	ENSCAFG00020018901	RRP1B	100	60.875	Canis_lupus_dingo
ENSCGRG00001010889	-	100	60.898	ENSCHIG00000021519	RRP1B	100	60.898	Capra_hircus
ENSCGRG00001010889	-	100	58.995	ENSCPOG00000002396	RRP1B	100	58.995	Cavia_porcellus
ENSCGRG00001010889	-	100	64.567	ENSCCAG00000029384	RRP1B	100	64.567	Cebus_capucinus
ENSCGRG00001010889	-	53	49.265	ENSCCAG00000029828	RRP1	71	53.372	Cebus_capucinus
ENSCGRG00001010889	-	100	66.711	ENSCATG00000017423	RRP1B	100	66.711	Cercocebus_atys
ENSCGRG00001010889	-	54	45.913	ENSCLAG00000011639	RRP1	75	48.725	Chinchilla_lanigera
ENSCGRG00001010889	-	100	59.620	ENSCLAG00000005622	RRP1B	100	59.620	Chinchilla_lanigera
ENSCGRG00001010889	-	100	66.316	ENSCSAG00000007961	RRP1B	100	66.316	Chlorocebus_sabaeus
ENSCGRG00001010889	-	51	56.364	ENSCHOG00000002426	-	55	61.607	Choloepus_hoffmanni
ENSCGRG00001010889	-	99	47.545	ENSCPBG00000010310	RRP1B	98	47.755	Chrysemys_picta_bellii
ENSCGRG00001010889	-	53	32.401	ENSCING00000003304	-	71	35.799	Ciona_intestinalis
ENSCGRG00001010889	-	100	66.184	ENSCANG00000040952	RRP1B	100	66.184	Colobus_angolensis_palliatus
ENSCGRG00001010889	-	94	100.000	ENSCGRG00000001553	Rrp1b	97	99.858	Cricetulus_griseus_crigri
ENSCGRG00001010889	-	59	56.989	ENSCSEG00000020711	-	79	48.739	Cynoglossus_semilaevis
ENSCGRG00001010889	-	56	48.598	ENSDNOG00000019880	RRP1	80	51.546	Dasypus_novemcinctus
ENSCGRG00001010889	-	100	58.344	ENSDNOG00000032774	RRP1B	100	58.607	Dasypus_novemcinctus
ENSCGRG00001010889	-	93	58.368	ENSDORG00000005496	Rrp1b	100	58.650	Dipodomys_ordii
ENSCGRG00001010889	-	100	51.515	ENSETEG00000019489	RRP1B	100	51.842	Echinops_telfairi
ENSCGRG00001010889	-	100	63.325	ENSEASG00005001687	RRP1B	100	63.325	Equus_asinus_asinus
ENSCGRG00001010889	-	52	48.241	ENSEASG00005001673	RRP1	74	53.453	Equus_asinus_asinus
ENSCGRG00001010889	-	100	63.325	ENSECAG00000018018	RRP1B	100	63.325	Equus_caballus
ENSCGRG00001010889	-	52	48.622	ENSECAG00000015703	RRP1	74	53.754	Equus_caballus
ENSCGRG00001010889	-	65	55.556	ENSELUG00000015885	-	93	42.416	Esox_lucius
ENSCGRG00001010889	-	54	48.030	ENSFCAG00000008434	RRP1	82	50.262	Felis_catus
ENSCGRG00001010889	-	100	59.761	ENSFCAG00000010272	RRP1B	100	60.053	Felis_catus
ENSCGRG00001010889	-	92	41.522	ENSFALG00000002024	RRP1B	100	41.656	Ficedula_albicollis
ENSCGRG00001010889	-	96	58.978	ENSFDAG00000010899	RRP1B	96	59.254	Fukomys_damarensis
ENSCGRG00001010889	-	54	45.721	ENSFDAG00000013728	RRP1	74	49.112	Fukomys_damarensis
ENSCGRG00001010889	-	58	52.041	ENSFHEG00000016314	-	50	54.082	Fundulus_heteroclitus
ENSCGRG00001010889	-	63	44.954	ENSGMOG00000001953	-	69	44.954	Gadus_morhua
ENSCGRG00001010889	-	51	54.188	ENSGALG00000035696	RRP1B	100	43.338	Gallus_gallus
ENSCGRG00001010889	-	68	44.595	ENSGACG00000001438	rrp1	67	48.092	Gasterosteus_aculeatus
ENSCGRG00001010889	-	100	46.310	ENSGAGG00000000375	RRP1B	100	47.059	Gopherus_agassizii
ENSCGRG00001010889	-	100	65.789	ENSGGOG00000012069	RRP1B	100	65.789	Gorilla_gorilla
ENSCGRG00001010889	-	99	61.355	ENSHGLG00000004968	RRP1B	100	61.753	Heterocephalus_glaber_female
ENSCGRG00001010889	-	86	65.588	ENSHGLG00100002232	RRP1B	99	55.061	Heterocephalus_glaber_male
ENSCGRG00001010889	-	68	43.972	ENSHCOG00000018388	-	60	43.972	Hippocampus_comes
ENSCGRG00001010889	-	58	48.485	ENSIPUG00000000673	-	67	42.857	Ictalurus_punctatus
ENSCGRG00001010889	-	53	47.666	ENSSTOG00000011116	RRP1	75	52.059	Ictidomys_tridecemlineatus
ENSCGRG00001010889	-	99	66.891	ENSSTOG00000011790	RRP1B	96	68.393	Ictidomys_tridecemlineatus
ENSCGRG00001010889	-	100	64.559	ENSJJAG00000021279	Rrp1b	100	65.086	Jaculus_jaculus
ENSCGRG00001010889	-	60	47.899	ENSKMAG00000005539	rrp1	53	43.646	Kryptolebias_marmoratus
ENSCGRG00001010889	-	99	39.272	ENSLACG00000017332	-	99	40.285	Latimeria_chalumnae
ENSCGRG00001010889	-	50	49.744	ENSLAFG00000022901	RRP1	75	53.216	Loxodonta_africana
ENSCGRG00001010889	-	88	56.741	ENSLAFG00000000766	RRP1B	85	70.572	Loxodonta_africana
ENSCGRG00001010889	-	100	66.447	ENSMFAG00000039152	RRP1B	100	66.447	Macaca_fascicularis
ENSCGRG00001010889	-	53	50.253	ENSMMUG00000012304	RRP1	71	54.381	Macaca_mulatta
ENSCGRG00001010889	-	100	63.816	ENSMMUG00000000104	RRP1B	100	63.816	Macaca_mulatta
ENSCGRG00001010889	-	53	49.749	ENSMNEG00000031210	RRP1	71	54.079	Macaca_nemestrina
ENSCGRG00001010889	-	100	66.491	ENSMNEG00000034269	RRP1B	100	66.491	Macaca_nemestrina
ENSCGRG00001010889	-	100	63.434	ENSMLEG00000040044	RRP1B	99	66.109	Mandrillus_leucophaeus
ENSCGRG00001010889	-	51	54.188	ENSMGAG00000014591	RRP1B	100	42.912	Meleagris_gallopavo
ENSCGRG00001010889	-	100	87.114	ENSMAUG00000021508	Rrp1b	100	86.309	Mesocricetus_auratus
ENSCGRG00001010889	-	100	64.427	ENSMICG00000004686	RRP1B	100	64.427	Microcebus_murinus
ENSCGRG00001010889	-	53	50.000	ENSMICG00000004700	RRP1	87	50.765	Microcebus_murinus
ENSCGRG00001010889	-	100	79.625	ENSMOCG00000001117	Rrp1b	100	79.625	Microtus_ochrogaster
ENSCGRG00001010889	-	100	57.461	ENSMODG00000021033	RRP1B	100	57.461	Monodelphis_domestica
ENSCGRG00001010889	-	100	77.047	MGP_CAROLIEiJ_G0021376	Rrp1b	100	77.047	Mus_caroli
ENSCGRG00001010889	-	100	76.337	ENSMUSG00000058392	Rrp1b	100	76.471	Mus_musculus
ENSCGRG00001010889	-	100	78.792	MGP_PahariEiJ_G0023695	Rrp1b	100	78.792	Mus_pahari
ENSCGRG00001010889	-	100	76.337	MGP_SPRETEiJ_G0022290	Rrp1b	100	76.471	Mus_spretus
ENSCGRG00001010889	-	50	43.529	ENSMPUG00000009826	RRP1	80	46.530	Mustela_putorius_furo
ENSCGRG00001010889	-	83	54.127	ENSMPUG00000009810	RRP1B	99	55.151	Mustela_putorius_furo
ENSCGRG00001010889	-	99	62.483	ENSMLUG00000007738	RRP1B	99	62.351	Myotis_lucifugus
ENSCGRG00001010889	-	50	61.778	ENSMLUG00000017788	RRP1	95	42.713	Myotis_lucifugus
ENSCGRG00001010889	-	100	71.809	ENSNGAG00000021073	Rrp1b	100	70.878	Nannospalax_galili
ENSCGRG00001010889	-	100	64.854	ENSNLEG00000001490	RRP1B	100	64.854	Nomascus_leucogenys
ENSCGRG00001010889	-	53	50.000	ENSNLEG00000034734	RRP1	71	53.776	Nomascus_leucogenys
ENSCGRG00001010889	-	72	80.672	ENSMEUG00000003226	-	80	80.672	Notamacropus_eugenii
ENSCGRG00001010889	-	100	58.333	ENSODEG00000013177	RRP1B	100	58.201	Octodon_degus
ENSCGRG00001010889	-	99	47.175	ENSOANG00000006470	RRP1B	99	47.382	Ornithorhynchus_anatinus
ENSCGRG00001010889	-	94	53.997	ENSOCUG00000025931	RRP1B	100	53.521	Oryctolagus_cuniculus
ENSCGRG00001010889	-	65	45.652	ENSORLG00020007199	-	54	46.499	Oryzias_latipes_hni
ENSCGRG00001010889	-	64	45.652	ENSORLG00015004425	-	54	47.656	Oryzias_latipes_hsok
ENSCGRG00001010889	-	64	48.000	ENSOMEG00000016910	-	56	48.000	Oryzias_melastigma
ENSCGRG00001010889	-	73	69.343	ENSOGAG00000009872	RRP1B	99	62.447	Otolemur_garnettii
ENSCGRG00001010889	-	94	58.741	ENSOARG00000011314	RRP1B	100	58.741	Ovis_aries
ENSCGRG00001010889	-	94	65.272	ENSPPAG00000035319	RRP1B	99	65.181	Pan_paniscus
ENSCGRG00001010889	-	53	50.500	ENSPPAG00000029050	RRP1	71	54.683	Pan_paniscus
ENSCGRG00001010889	-	54	47.291	ENSPPRG00000010656	RRP1	73	53.049	Panthera_pardus
ENSCGRG00001010889	-	100	59.073	ENSPPRG00000010356	RRP1B	100	59.367	Panthera_pardus
ENSCGRG00001010889	-	50	42.408	ENSPTIG00000019473	RRP1	79	44.693	Panthera_tigris_altaica
ENSCGRG00001010889	-	81	63.027	ENSPTIG00000016894	RRP1B	99	61.033	Panthera_tigris_altaica
ENSCGRG00001010889	-	100	65.789	ENSPTRG00000013958	RRP1B	100	65.789	Pan_troglodytes
ENSCGRG00001010889	-	100	66.842	ENSPANG00000011090	RRP1B	100	66.842	Papio_anubis
ENSCGRG00001010889	-	53	49.497	ENSPANG00000015097	RRP1	71	54.079	Papio_anubis
ENSCGRG00001010889	-	99	46.598	ENSPSIG00000008152	RRP1B	96	47.529	Pelodiscus_sinensis
ENSCGRG00001010889	-	100	83.356	ENSPEMG00000022490	Rrp1b	100	83.490	Peromyscus_maniculatus_bairdii
ENSCGRG00001010889	-	61	48.945	ENSPCIG00000015523	-	74	58.651	Phascolarctos_cinereus
ENSCGRG00001010889	-	100	58.571	ENSPCIG00000015513	RRP1B	100	58.901	Phascolarctos_cinereus
ENSCGRG00001010889	-	54	42.054	ENSPFOG00000007424	-	99	35.508	Poecilia_formosa
ENSCGRG00001010889	-	52	42.894	ENSPLAG00000016684	-	76	36.563	Poecilia_latipinna
ENSCGRG00001010889	-	68	45.736	ENSPREG00000015673	-	79	45.736	Poecilia_reticulata
ENSCGRG00001010889	-	100	66.316	ENSPPYG00000011470	RRP1B	100	66.316	Pongo_abelii
ENSCGRG00001010889	-	53	50.251	ENSPPYG00000011474	RRP1	71	54.354	Pongo_abelii
ENSCGRG00001010889	-	85	84.211	ENSPCAG00000013723	RRP1B	91	84.211	Procavia_capensis
ENSCGRG00001010889	-	100	65.481	ENSPCOG00000017927	RRP1B	100	65.481	Propithecus_coquereli
ENSCGRG00001010889	-	99	55.395	ENSPVAG00000001436	RRP1B	99	55.731	Pteropus_vampyrus
ENSCGRG00001010889	-	59	60.241	ENSPNAG00000007718	-	51	42.045	Pygocentrus_nattereri
ENSCGRG00001010889	-	100	80.134	ENSRNOG00000001194	Rrp1b	100	80.134	Rattus_norvegicus
ENSCGRG00001010889	-	100	62.500	ENSRBIG00000041689	RRP1B	100	62.500	Rhinopithecus_bieti
ENSCGRG00001010889	-	100	66.447	ENSRROG00000031499	RRP1B	100	66.447	Rhinopithecus_roxellana
ENSCGRG00001010889	-	94	61.828	ENSSBOG00000034727	RRP1B	99	61.828	Saimiri_boliviensis_boliviensis
ENSCGRG00001010889	-	50	50.133	ENSSBOG00000034689	RRP1	71	53.659	Saimiri_boliviensis_boliviensis
ENSCGRG00001010889	-	100	58.191	ENSSHAG00000017789	RRP1B	100	58.191	Sarcophilus_harrisii
ENSCGRG00001010889	-	64	50.000	ENSSMAG00000016847	-	85	42.297	Scophthalmus_maximus
ENSCGRG00001010889	-	68	47.482	ENSSDUG00000000551	-	54	46.939	Seriola_dumerili
ENSCGRG00001010889	-	66	47.482	ENSSLDG00000002538	-	54	46.939	Seriola_lalandi_dorsalis
ENSCGRG00001010889	-	77	61.837	ENSSARG00000003108	-	80	61.837	Sorex_araneus
ENSCGRG00001010889	-	100	43.875	ENSSPUG00000002834	RRP1B	100	44.125	Sphenodon_punctatus
ENSCGRG00001010889	-	64	49.219	ENSSPAG00000005370	-	51	49.219	Stegastes_partitus
ENSCGRG00001010889	-	100	55.232	ENSSSCG00000021698	RRP1B	100	55.232	Sus_scrofa
ENSCGRG00001010889	-	94	43.593	ENSTGUG00000005926	RRP1B	100	43.725	Taeniopygia_guttata
ENSCGRG00001010889	-	61	45.833	ENSTNIG00000005053	rrp1	70	45.833	Tetraodon_nigroviridis
ENSCGRG00001010889	-	82	68.766	ENSTBEG00000000422	RRP1B	100	74.556	Tupaia_belangeri
ENSCGRG00001010889	-	100	58.069	ENSTTRG00000000723	RRP1B	100	58.730	Tursiops_truncatus
ENSCGRG00001010889	-	100	58.223	ENSUAMG00000026765	RRP1B	100	59.019	Ursus_americanus
ENSCGRG00001010889	-	64	74.603	ENSUMAG00000025510	RRP1B	92	74.603	Ursus_maritimus
ENSCGRG00001010889	-	94	60.141	ENSVVUG00000024509	RRP1B	99	60.423	Vulpes_vulpes
ENSCGRG00001010889	-	62	45.902	ENSXETG00000013683	rrp1b	66	51.020	Xenopus_tropicalis
ENSCGRG00001010889	-	64	45.522	ENSXMAG00000023123	-	99	34.105	Xiphophorus_maculatus