EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011003 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 474 bases
Position: chrscaffold_15:45617752-45618225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008798	Ribosomal_L23	PF00276.20	3.9e-14	1	1
ENSCGRP00001008798	Ribosomal_L23eN	PF03939.13	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012944	-	474	-	ENSCGRP00001008798	157 (aa)	-	G3IDR0

Gene Model

Click here to download ENSCGRG00001011003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011003's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011003	-	69	60.909	ENSCGRG00001012775	-	100	65.942
ENSCGRG00001011003	-	65	61.165	ENSCGRG00001007764	-	98	65.649
ENSCGRG00001011003	-	81	65.625	ENSCGRG00001000422	Rpl23a	100	69.620
ENSCGRG00001011003	-	81	63.780	ENSCGRG00001019326	-	100	68.153
ENSCGRG00001011003	-	82	59.231	ENSCGRG00001013713	-	100	62.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011003	-	97	56.329	ENSAMEG00000005208	-	97	52.941	Ailuropoda_melanoleuca
ENSCGRG00001011003	-	55	60.465	ENSCAFG00000028825	-	66	60.465	Canis_familiaris
ENSCGRG00001011003	-	97	49.677	ENSCAFG00000006700	-	78	45.669	Canis_familiaris
ENSCGRG00001011003	-	80	56.693	ENSCAFG00000009706	-	81	56.452	Canis_familiaris
ENSCGRG00001011003	-	96	57.616	ENSCAFG00000015308	-	63	65.957	Canis_familiaris
ENSCGRG00001011003	-	100	55.414	ENSCAFG00000014107	-	80	54.331	Canis_familiaris
ENSCGRG00001011003	-	96	53.205	ENSCAFG00000003391	-	60	64.894	Canis_familiaris
ENSCGRG00001011003	-	73	58.772	ENSCAFG00000004716	-	74	59.292	Canis_familiaris
ENSCGRG00001011003	-	100	100.000	ENSCGRG00000019420	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001011003	-	99	53.846	ENSDNOG00000039276	-	97	53.846	Dasypus_novemcinctus
ENSCGRG00001011003	-	100	47.771	ENSDNOG00000041286	-	61	57.895	Dasypus_novemcinctus
ENSCGRG00001011003	-	54	52.941	MGP_CAROLIEiJ_G0018758	-	70	52.941	Mus_caroli
ENSCGRG00001011003	-	57	50.562	MGP_SPRETEiJ_G0019641	-	72	50.562	Mus_spretus
ENSCGRG00001011003	-	100	54.938	ENSOCUG00000021843	-	100	54.938	Oryctolagus_cuniculus