EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011032 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 2384 bases
Position: chrscaffold_20:30627628-30630011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001008839	La	PF05383.17	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001012989	-	675	-	ENSCGRP00001008839	224 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001011032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011032	-	85	95.812	ENSCGRG00001000311	-	100	95.812
ENSCGRG00001011032	-	89	85.930	ENSCGRG00001011674	-	93	85.930

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011032	-	89	77.889	ENSG00000161813	LARP4	100	80.800	Homo_sapiens
ENSCGRG00001011032	-	75	58.523	ENSACIG00000000370	-	88	58.523	Amphilophus_citrinellus
ENSCGRG00001011032	-	69	70.968	ENSACIG00000001198	larp4aa	77	74.820	Amphilophus_citrinellus
ENSCGRG00001011032	-	75	62.722	ENSAPEG00000015441	larp4ab	82	53.631	Amphiprion_percula
ENSCGRG00001011032	-	83	63.441	ENSCCAG00000030343	-	99	63.441	Cebus_capucinus
ENSCGRG00001011032	-	83	70.430	ENSCATG00000039611	-	99	70.430	Cercocebus_atys
ENSCGRG00001011032	-	84	70.745	ENSCANG00000033097	-	74	70.745	Colobus_angolensis_palliatus
ENSCGRG00001011032	-	80	88.889	ENSCGRG00000000087	-	97	88.889	Cricetulus_griseus_crigri
ENSCGRG00001011032	-	69	63.226	ENSCVAG00000001411	-	87	63.226	Cyprinodon_variegatus
ENSCGRG00001011032	-	88	58.333	ENSDARG00000074979	larp4ab	86	67.974	Danio_rerio
ENSCGRG00001011032	-	50	56.250	ENSEBUG00000005290	-	52	56.250	Eptatretus_burgeri
ENSCGRG00001011032	-	81	83.978	ENSEASG00005004356	LARP4	50	83.978	Equus_asinus_asinus
ENSCGRG00001011032	-	78	78.736	ENSFDAG00000003796	-	95	78.736	Fukomys_damarensis
ENSCGRG00001011032	-	89	78.392	ENSGGOG00000015230	LARP4	53	78.392	Gorilla_gorilla
ENSCGRG00001011032	-	76	58.235	ENSHBUG00000021929	-	81	58.235	Haplochromis_burtoni
ENSCGRG00001011032	-	89	70.854	ENSHGLG00100000622	-	95	68.473	Heterocephalus_glaber_male
ENSCGRG00001011032	-	88	68.182	ENSJJAG00000014649	-	94	70.330	Jaculus_jaculus
ENSCGRG00001011032	-	83	71.505	ENSMFAG00000001037	-	99	71.505	Macaca_fascicularis
ENSCGRG00001011032	-	83	71.505	ENSMMUG00000045683	-	99	71.505	Macaca_mulatta
ENSCGRG00001011032	-	83	66.667	ENSMNEG00000037799	-	99	66.667	Macaca_nemestrina
ENSCGRG00001011032	-	83	68.280	ENSMLEG00000038232	-	99	68.280	Mandrillus_leucophaeus
ENSCGRG00001011032	-	83	74.866	ENSMICG00000030156	-	86	72.193	Microcebus_murinus
ENSCGRG00001011032	-	80	82.123	ENSMICG00000046883	-	99	82.123	Microcebus_murinus
ENSCGRG00001011032	-	63	76.761	ENSMODG00000004844	-	67	76.761	Monodelphis_domestica
ENSCGRG00001011032	-	72	61.628	ENSMALG00000015637	-	74	61.628	Monopterus_albus
ENSCGRG00001011032	-	78	64.045	ENSMALG00000018631	larp4aa	88	63.953	Monopterus_albus
ENSCGRG00001011032	-	89	78.392	MGP_CAROLIEiJ_G0020281	Larp4	52	78.392	Mus_caroli
ENSCGRG00001011032	-	70	63.694	ENSNBRG00000015675	larp4ab	87	57.669	Neolamprologus_brichardi
ENSCGRG00001011032	-	61	67.883	ENSORLG00000018835	-	65	67.883	Oryzias_latipes
ENSCGRG00001011032	-	61	67.883	ENSORLG00020009602	-	65	67.883	Oryzias_latipes_hni
ENSCGRG00001011032	-	62	66.187	ENSORLG00015005865	-	67	66.187	Oryzias_latipes_hsok
ENSCGRG00001011032	-	78	65.517	ENSOMEG00000019749	larp4aa	72	75.182	Oryzias_melastigma
ENSCGRG00001011032	-	65	65.517	ENSOMEG00000008561	-	75	65.517	Oryzias_melastigma
ENSCGRG00001011032	-	89	66.834	ENSPTRG00000045907	-	53	66.834	Pan_troglodytes
ENSCGRG00001011032	-	62	75.362	ENSPMGG00000023289	-	90	75.362	Periophthalmus_magnuspinnatus
ENSCGRG00001011032	-	78	57.714	ENSPMAG00000001038	-	68	57.714	Petromyzon_marinus
ENSCGRG00001011032	-	77	62.778	ENSPREG00000016263	larp4ab	75	66.667	Poecilia_reticulata
ENSCGRG00001011032	-	64	76.389	ENSPPYG00000006330	-	66	76.389	Pongo_abelii
ENSCGRG00001011032	-	76	58.824	ENSPNYG00000000915	-	69	58.824	Pundamilia_nyererei
ENSCGRG00001011032	-	63	71.831	ENSRNOG00000057943	AABR07058884.2	67	71.831	Rattus_norvegicus
ENSCGRG00001011032	-	78	66.667	ENSSBOG00000035851	-	95	66.667	Saimiri_boliviensis_boliviensis
ENSCGRG00001011032	-	72	68.944	ENSSPAG00000007222	larp4aa	76	72.789	Stegastes_partitus
ENSCGRG00001011032	-	87	56.410	ENSTRUG00000015939	larp4aa	51	57.672	Takifugu_rubripes
ENSCGRG00001011032	-	77	62.222	ENSXCOG00000019635	larp4ab	75	65.839	Xiphophorus_couchianus