EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001011284 (Gene tree)
Gene ID: -
Gene Symbol: Sfswap
Alias: 1190005N23Rik|6330437E22Rik|Sfrs8
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 70727 bases
Position: chrscaffold_22:239591-310317
Accession: 100755786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001009165	DRY_EERY	PF09750.9	2.1e-32	1	1
ENSCGRP00001009151	DRY_EERY	PF09750.9	2.2e-32	1	1
ENSCGRP00001009165	Surp	PF01805.20	3.3e-27	1	2
ENSCGRP00001009165	Surp	PF01805.20	3.3e-27	2	2
ENSCGRP00001009151	Surp	PF01805.20	3.8e-27	1	2
ENSCGRP00001009151	Surp	PF01805.20	3.8e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001013332	-	3313	XM_007650076	ENSCGRP00001009151	995 (aa)	XP_007648266	UPI0004543231
ENSCGRT00001013347	-	2838	XM_016967741	ENSCGRP00001009165	945 (aa)	XP_003509535	G3I2M7

Gene Model

Click here to download ENSCGRG00001011284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011284	Sfswap	100	88.328	ENSG00000061936	SFSWAP	100	88.749	Homo_sapiens
ENSCGRG00001011284	Sfswap	74	58.759	ENSAPOG00000005784	sfswap	88	80.952	Acanthochromis_polyacanthus
ENSCGRG00001011284	Sfswap	100	83.738	ENSAMEG00000013818	SFSWAP	100	84.266	Ailuropoda_melanoleuca
ENSCGRG00001011284	Sfswap	71	59.571	ENSAOCG00000016469	sfswap	63	64.631	Amphiprion_ocellaris
ENSCGRG00001011284	Sfswap	71	58.723	ENSAPEG00000004965	sfswap	63	64.631	Amphiprion_percula
ENSCGRG00001011284	Sfswap	79	81.818	ENSATEG00000021053	sfswap	57	62.439	Anabas_testudineus
ENSCGRG00001011284	Sfswap	100	75.653	ENSAPLG00000013808	SFSWAP	97	77.023	Anas_platyrhynchos
ENSCGRG00001011284	Sfswap	100	88.421	ENSANAG00000001518	SFSWAP	100	88.421	Aotus_nancymaae
ENSCGRG00001011284	Sfswap	74	58.665	ENSACLG00000020159	sfswap	84	66.848	Astatotilapia_calliptera
ENSCGRG00001011284	Sfswap	100	88.080	ENSBTAG00000000439	SFSWAP	100	88.328	Bos_taurus
ENSCGRG00001011284	Sfswap	100	88.514	ENSCJAG00000003613	SFSWAP	100	87.671	Callithrix_jacchus
ENSCGRG00001011284	Sfswap	100	86.152	ENSCAFG00000006625	SFSWAP	100	86.152	Canis_familiaris
ENSCGRG00001011284	Sfswap	87	79.095	ENSCAFG00020011254	SFSWAP	99	79.213	Canis_lupus_dingo
ENSCGRG00001011284	Sfswap	100	87.764	ENSCHIG00000008838	SFSWAP	100	87.553	Capra_hircus
ENSCGRG00001011284	Sfswap	100	87.764	ENSTSYG00000010303	SFSWAP	100	88.397	Carlito_syrichta
ENSCGRG00001011284	Sfswap	92	88.255	ENSCAPG00000004394	SFSWAP	96	89.168	Cavia_aperea
ENSCGRG00001011284	Sfswap	100	88.409	ENSCPOG00000005280	SFSWAP	100	89.252	Cavia_porcellus
ENSCGRG00001011284	Sfswap	100	87.987	ENSCCAG00000037255	SFSWAP	100	87.460	Cebus_capucinus
ENSCGRG00001011284	Sfswap	100	89.135	ENSCATG00000031094	SFSWAP	100	89.241	Cercocebus_atys
ENSCGRG00001011284	Sfswap	100	91.456	ENSCLAG00000008380	SFSWAP	100	91.561	Chinchilla_lanigera
ENSCGRG00001011284	Sfswap	100	89.030	ENSCSAG00000001884	SFSWAP	100	89.135	Chlorocebus_sabaeus
ENSCGRG00001011284	Sfswap	92	73.121	ENSCHOG00000003578	SFSWAP	100	73.235	Choloepus_hoffmanni
ENSCGRG00001011284	Sfswap	100	89.135	ENSCANG00000036501	SFSWAP	100	89.241	Colobus_angolensis_palliatus
ENSCGRG00001011284	Sfswap	100	100.000	ENSCGRG00000017417	Sfswap	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001011284	Sfswap	52	59.740	ENSCVAG00000001205	-	72	51.515	Cyprinodon_variegatus
ENSCGRG00001011284	Sfswap	100	85.600	ENSDNOG00000018742	SFSWAP	99	85.900	Dasypus_novemcinctus
ENSCGRG00001011284	Sfswap	97	82.898	ENSDORG00000010352	Sfswap	99	82.046	Dipodomys_ordii
ENSCGRG00001011284	Sfswap	51	46.610	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSCGRG00001011284	Sfswap	77	90.291	ENSETEG00000016657	-	86	91.262	Echinops_telfairi
ENSCGRG00001011284	Sfswap	84	38.229	ENSEBUG00000016748	SFSWAP	93	42.384	Eptatretus_burgeri
ENSCGRG00001011284	Sfswap	100	87.447	ENSEASG00005016502	SFSWAP	100	87.869	Equus_asinus_asinus
ENSCGRG00001011284	Sfswap	100	86.500	ENSECAG00000007657	SFSWAP	100	86.900	Equus_caballus
ENSCGRG00001011284	Sfswap	86	73.684	ENSEEUG00000001713	SFSWAP	99	73.374	Erinaceus_europaeus
ENSCGRG00001011284	Sfswap	100	52.253	ENSELUG00000010942	sfswap	99	64.234	Esox_lucius
ENSCGRG00001011284	Sfswap	100	86.061	ENSFCAG00000010778	SFSWAP	100	86.378	Felis_catus
ENSCGRG00001011284	Sfswap	97	76.964	ENSFALG00000009577	SFSWAP	96	76.350	Ficedula_albicollis
ENSCGRG00001011284	Sfswap	100	90.441	ENSFDAG00000017235	SFSWAP	100	90.231	Fukomys_damarensis
ENSCGRG00001011284	Sfswap	55	69.435	ENSGMOG00000009205	sfswap	83	70.764	Gadus_morhua
ENSCGRG00001011284	Sfswap	97	76.692	ENSGALG00000002487	SFSWAP	99	75.000	Gallus_gallus
ENSCGRG00001011284	Sfswap	99	50.859	ENSGAFG00000006272	sfswap	92	63.342	Gambusia_affinis
ENSCGRG00001011284	Sfswap	77	72.549	ENSGACG00000017647	sfswap	92	63.807	Gasterosteus_aculeatus
ENSCGRG00001011284	Sfswap	97	75.897	ENSGAGG00000002611	SFSWAP	98	74.627	Gopherus_agassizii
ENSCGRG00001011284	Sfswap	100	88.644	ENSGGOG00000014877	SFSWAP	100	89.064	Gorilla_gorilla
ENSCGRG00001011284	Sfswap	100	91.350	ENSHGLG00000019216	SFSWAP	100	91.456	Heterocephalus_glaber_female
ENSCGRG00001011284	Sfswap	100	91.139	ENSHGLG00100019350	SFSWAP	100	91.245	Heterocephalus_glaber_male
ENSCGRG00001011284	Sfswap	73	58.047	ENSHCOG00000009475	sfswap	99	50.149	Hippocampus_comes
ENSCGRG00001011284	Sfswap	98	55.703	ENSIPUG00000010598	sfswap	60	66.832	Ictalurus_punctatus
ENSCGRG00001011284	Sfswap	100	89.863	ENSSTOG00000000773	SFSWAP	100	89.863	Ictidomys_tridecemlineatus
ENSCGRG00001011284	Sfswap	100	91.456	ENSJJAG00000006609	Sfswap	100	91.561	Jaculus_jaculus
ENSCGRG00001011284	Sfswap	74	56.757	ENSKMAG00000013168	sfswap	85	56.982	Kryptolebias_marmoratus
ENSCGRG00001011284	Sfswap	100	65.329	ENSLACG00000018678	SFSWAP	98	63.816	Latimeria_chalumnae
ENSCGRG00001011284	Sfswap	92	84.247	ENSLAFG00000014462	SFSWAP	100	84.589	Loxodonta_africana
ENSCGRG00001011284	Sfswap	100	88.500	ENSMFAG00000037352	SFSWAP	100	88.200	Macaca_fascicularis
ENSCGRG00001011284	Sfswap	100	89.346	ENSMMUG00000020343	SFSWAP	100	89.030	Macaca_mulatta
ENSCGRG00001011284	Sfswap	100	89.346	ENSMNEG00000041002	SFSWAP	100	89.030	Macaca_nemestrina
ENSCGRG00001011284	Sfswap	100	86.920	ENSMLEG00000035728	SFSWAP	100	86.498	Mandrillus_leucophaeus
ENSCGRG00001011284	Sfswap	97	75.407	ENSMGAG00000002191	SFSWAP	99	74.235	Meleagris_gallopavo
ENSCGRG00001011284	Sfswap	100	88.912	ENSMICG00000004465	SFSWAP	100	89.968	Microcebus_murinus
ENSCGRG00001011284	Sfswap	100	97.566	ENSMOCG00000014390	Sfswap	100	97.566	Microtus_ochrogaster
ENSCGRG00001011284	Sfswap	68	60.313	ENSMALG00000012603	sfswap	97	51.189	Monopterus_albus
ENSCGRG00001011284	Sfswap	100	96.614	MGP_CAROLIEiJ_G0027780	Sfswap	100	96.614	Mus_caroli
ENSCGRG00001011284	Sfswap	100	96.508	ENSMUSG00000029439	Sfswap	100	96.508	Mus_musculus
ENSCGRG00001011284	Sfswap	100	96.519	MGP_PahariEiJ_G0024360	Sfswap	100	96.519	Mus_pahari
ENSCGRG00001011284	Sfswap	100	96.296	MGP_SPRETEiJ_G0028779	Sfswap	100	96.296	Mus_spretus
ENSCGRG00001011284	Sfswap	100	84.989	ENSMPUG00000002218	SFSWAP	100	85.095	Mustela_putorius_furo
ENSCGRG00001011284	Sfswap	90	77.024	ENSMLUG00000011296	SFSWAP	100	78.420	Myotis_lucifugus
ENSCGRG00001011284	Sfswap	100	93.770	ENSNGAG00000018167	Sfswap	100	93.770	Nannospalax_galili
ENSCGRG00001011284	Sfswap	100	86.842	ENSNLEG00000008386	SFSWAP	100	86.947	Nomascus_leucogenys
ENSCGRG00001011284	Sfswap	71	87.319	ENSMEUG00000009556	-	79	87.319	Notamacropus_eugenii
ENSCGRG00001011284	Sfswap	100	74.316	ENSOPRG00000006983	-	99	89.209	Ochotona_princeps
ENSCGRG00001011284	Sfswap	100	91.034	ENSODEG00000008020	SFSWAP	100	91.034	Octodon_degus
ENSCGRG00001011284	Sfswap	96	54.509	ENSONIG00000003757	sfswap	99	53.557	Oreochromis_niloticus
ENSCGRG00001011284	Sfswap	51	78.732	ENSOANG00000013861	SFSWAP	100	81.756	Ornithorhynchus_anatinus
ENSCGRG00001011284	Sfswap	100	85.021	ENSOCUG00000002165	SFSWAP	100	83.781	Oryctolagus_cuniculus
ENSCGRG00001011284	Sfswap	75	57.531	ENSORLG00020010779	sfswap	55	66.033	Oryzias_latipes_hni
ENSCGRG00001011284	Sfswap	83	58.356	ENSOMEG00000022065	sfswap	89	67.297	Oryzias_melastigma
ENSCGRG00001011284	Sfswap	89	88.666	ENSOGAG00000016724	SFSWAP	99	88.784	Otolemur_garnettii
ENSCGRG00001011284	Sfswap	100	87.263	ENSOARG00000014314	SFSWAP	100	87.053	Ovis_aries
ENSCGRG00001011284	Sfswap	100	88.433	ENSPPAG00000036706	SFSWAP	100	88.854	Pan_paniscus
ENSCGRG00001011284	Sfswap	99	73.955	ENSPTIG00000004304	SFSWAP	97	87.186	Panthera_tigris_altaica
ENSCGRG00001011284	Sfswap	100	88.223	ENSPTRG00000005640	SFSWAP	100	88.644	Pan_troglodytes
ENSCGRG00001011284	Sfswap	100	89.135	ENSPANG00000019737	SFSWAP	100	89.241	Papio_anubis
ENSCGRG00001011284	Sfswap	63	72.126	ENSPSIG00000017807	SFSWAP	100	74.448	Pelodiscus_sinensis
ENSCGRG00001011284	Sfswap	100	97.252	ENSPEMG00000001237	Sfswap	100	97.252	Peromyscus_maniculatus_bairdii
ENSCGRG00001011284	Sfswap	84	59.452	ENSPFOG00000019657	sfswap	57	63.000	Poecilia_formosa
ENSCGRG00001011284	Sfswap	84	59.041	ENSPLAG00000008513	sfswap	92	62.594	Poecilia_latipinna
ENSCGRG00001011284	Sfswap	84	59.452	ENSPMEG00000008716	sfswap	92	63.000	Poecilia_mexicana
ENSCGRG00001011284	Sfswap	84	58.493	ENSPREG00000006692	sfswap	92	62.344	Poecilia_reticulata
ENSCGRG00001011284	Sfswap	98	88.317	ENSPPYG00000005129	SFSWAP	100	88.639	Pongo_abelii
ENSCGRG00001011284	Sfswap	58	87.500	ENSPCAG00000004977	-	65	87.500	Procavia_capensis
ENSCGRG00001011284	Sfswap	100	88.291	ENSPCOG00000023786	SFSWAP	100	89.662	Propithecus_coquereli
ENSCGRG00001011284	Sfswap	92	85.540	ENSPVAG00000014918	SFSWAP	92	85.185	Pteropus_vampyrus
ENSCGRG00001011284	Sfswap	74	57.084	ENSPNYG00000012660	sfswap	53	66.576	Pundamilia_nyererei
ENSCGRG00001011284	Sfswap	87	54.478	ENSPNAG00000007073	sfswap	53	67.885	Pygocentrus_nattereri
ENSCGRG00001011284	Sfswap	100	96.787	ENSRNOG00000000931	Sfswap	100	96.787	Rattus_norvegicus
ENSCGRG00001011284	Sfswap	100	82.893	ENSRBIG00000036330	SFSWAP	94	92.346	Rhinopithecus_bieti
ENSCGRG00001011284	Sfswap	100	88.819	ENSRROG00000032001	SFSWAP	100	88.924	Rhinopithecus_roxellana
ENSCGRG00001011284	Sfswap	100	87.777	ENSSBOG00000026217	SFSWAP	100	89.632	Saimiri_boliviensis_boliviensis
ENSCGRG00001011284	Sfswap	92	80.226	ENSSHAG00000014232	SFSWAP	100	81.448	Sarcophilus_harrisii
ENSCGRG00001011284	Sfswap	82	56.739	ENSSMAG00000018718	sfswap	77	64.267	Scophthalmus_maximus
ENSCGRG00001011284	Sfswap	71	61.473	ENSSDUG00000021680	sfswap	76	66.404	Seriola_dumerili
ENSCGRG00001011284	Sfswap	77	60.931	ENSSLDG00000010835	sfswap	75	66.842	Seriola_lalandi_dorsalis
ENSCGRG00001011284	Sfswap	78	87.379	ENSSARG00000000424	SFSWAP	85	87.379	Sorex_araneus
ENSCGRG00001011284	Sfswap	81	81.159	ENSSPUG00000010272	SFSWAP	99	74.576	Sphenodon_punctatus
ENSCGRG00001011284	Sfswap	71	59.915	ENSSPAG00000014310	sfswap	55	67.292	Stegastes_partitus
ENSCGRG00001011284	Sfswap	100	87.579	ENSSSCG00000009744	SFSWAP	100	87.789	Sus_scrofa
ENSCGRG00001011284	Sfswap	97	76.566	ENSTGUG00000004623	SFSWAP	99	76.598	Taeniopygia_guttata
ENSCGRG00001011284	Sfswap	54	93.750	ENSTBEG00000004983	-	66	93.750	Tupaia_belangeri
ENSCGRG00001011284	Sfswap	100	78.023	ENSTTRG00000013478	SFSWAP	93	92.105	Tursiops_truncatus
ENSCGRG00001011284	Sfswap	100	84.372	ENSUAMG00000016807	SFSWAP	100	80.639	Ursus_americanus
ENSCGRG00001011284	Sfswap	90	78.923	ENSUMAG00000002957	SFSWAP	91	85.995	Ursus_maritimus
ENSCGRG00001011284	Sfswap	50	93.023	ENSVPAG00000010479	-	65	92.683	Vicugna_pacos
ENSCGRG00001011284	Sfswap	100	86.258	ENSVVUG00000010753	SFSWAP	100	86.258	Vulpes_vulpes
ENSCGRG00001011284	Sfswap	97	59.635	ENSXETG00000009350	sfswap	94	65.278	Xenopus_tropicalis
ENSCGRG00001011284	Sfswap	84	59.315	ENSXMAG00000009020	sfswap	92	62.344	Xiphophorus_maculatus