EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011389 (Gene tree)
Gene ID: -
Gene Symbol: Snai3
Alias: Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 5596 bases
Position: chrscaffold_20:38693599-38699194
Accession: 100766252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001009257	zf-C2H2	PF00096.26	5.4e-24	1	4
ENSCGRP00001009257	zf-C2H2	PF00096.26	5.4e-24	2	4
ENSCGRP00001009257	zf-C2H2	PF00096.26	5.4e-24	3	4
ENSCGRP00001009257	zf-C2H2	PF00096.26	5.4e-24	4	4
ENSCGRP00001009257	zf-met	PF12874.7	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001013450	-	864	XM_003495092	ENSCGRP00001009257	287 (aa)	XP_003495140	UPI00022F340B

Gene Model

Click here to download ENSCGRG00001011389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011389	Snai3	55	38.519	ENSCGRG00001020646	Gm3854	57	38.519
ENSCGRG00001011389	Snai3	52	40.777	ENSCGRG00001001639	Zfp882	74	41.584
ENSCGRG00001011389	Snai3	55	43.396	ENSCGRG00001021088	Zfp354a	68	43.396
ENSCGRG00001011389	Snai3	59	43.373	ENSCGRG00001013279	Zfp784	60	43.373
ENSCGRG00001011389	Snai3	70	38.519	ENSCGRG00001024303	-	99	38.519
ENSCGRG00001011389	Snai3	99	47.387	ENSCGRG00001013674	Snai2	99	48.084
ENSCGRG00001011389	Snai3	76	42.500	ENSCGRG00001024630	-	80	42.500
ENSCGRG00001011389	Snai3	69	39.098	ENSCGRG00001012523	-	79	39.098
ENSCGRG00001011389	Snai3	100	43.046	ENSCGRG00001007749	Snai1	99	43.377
ENSCGRG00001011389	Snai3	64	41.322	ENSCGRG00001011966	Zfp715	64	41.322
ENSCGRG00001011389	Snai3	55	46.512	ENSCGRG00001007115	-	76	47.059
ENSCGRG00001011389	Snai3	62	34.641	ENSCGRG00001002297	-	68	34.641
ENSCGRG00001011389	Snai3	57	39.706	ENSCGRG00001010752	2610008E11Rik	60	39.706
ENSCGRG00001011389	Snai3	54	41.772	ENSCGRG00001017330	Repin1	70	41.772
ENSCGRG00001011389	Snai3	53	43.662	ENSCGRG00001013598	Zfp865	54	40.000
ENSCGRG00001011389	Snai3	51	41.228	ENSCGRG00001013939	Zfp454	67	41.228
ENSCGRG00001011389	Snai3	64	36.296	ENSCGRG00001007163	-	79	36.296
ENSCGRG00001011389	Snai3	51	50.649	ENSCGRG00001013561	Zfp768	54	38.261
ENSCGRG00001011389	Snai3	50	38.519	ENSCGRG00001002406	Zfp39	59	38.519
ENSCGRG00001011389	Snai3	53	41.270	ENSCGRG00001012640	Zfp94	70	41.270
ENSCGRG00001011389	Snai3	53	46.053	ENSCGRG00001023858	Zfp560	67	46.053
ENSCGRG00001011389	Snai3	51	40.441	ENSCGRG00001010581	Prdm5	74	43.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011389	Snai3	99	47.038	ENSG00000019549	SNAI2	99	47.735	Homo_sapiens
ENSCGRG00001011389	Snai3	100	70.548	ENSG00000185669	SNAI3	100	71.575	Homo_sapiens
ENSCGRG00001011389	Snai3	99	47.038	ENSAMEG00000009606	SNAI2	99	47.735	Ailuropoda_melanoleuca
ENSCGRG00001011389	Snai3	99	47.405	ENSANAG00000021163	SNAI2	99	48.097	Aotus_nancymaae
ENSCGRG00001011389	Snai3	100	73.288	ENSANAG00000032748	SNAI3	100	72.260	Aotus_nancymaae
ENSCGRG00001011389	Snai3	99	47.203	ENSBTAG00000013227	SNAI2	99	47.569	Bos_taurus
ENSCGRG00001011389	Snai3	99	68.166	ENSBTAG00000017528	SNAI3	99	67.128	Bos_taurus
ENSCGRG00001011389	Snai3	99	47.038	ENSCJAG00000013499	SNAI2	99	47.735	Callithrix_jacchus
ENSCGRG00001011389	Snai3	99	46.713	ENSCAFG00000006638	SNAI2	99	46.713	Canis_familiaris
ENSCGRG00001011389	Snai3	100	65.411	ENSCAFG00000029458	SNAI3	100	66.438	Canis_familiaris
ENSCGRG00001011389	Snai3	100	65.753	ENSCAFG00020004719	SNAI3	100	66.781	Canis_lupus_dingo
ENSCGRG00001011389	Snai3	99	46.713	ENSCAFG00020015384	SNAI2	99	46.713	Canis_lupus_dingo
ENSCGRG00001011389	Snai3	99	47.203	ENSCHIG00000024410	SNAI2	99	47.569	Capra_hircus
ENSCGRG00001011389	Snai3	99	67.474	ENSCHIG00000018087	SNAI3	99	66.436	Capra_hircus
ENSCGRG00001011389	Snai3	91	68.061	ENSTSYG00000025594	SNAI3	91	68.061	Carlito_syrichta
ENSCGRG00001011389	Snai3	99	47.038	ENSCCAG00000024100	SNAI2	99	47.735	Cebus_capucinus
ENSCGRG00001011389	Snai3	99	47.038	ENSCATG00000028656	SNAI2	99	47.735	Cercocebus_atys
ENSCGRG00001011389	Snai3	100	72.603	ENSCATG00000031714	SNAI3	100	71.575	Cercocebus_atys
ENSCGRG00001011389	Snai3	99	47.387	ENSCLAG00000011797	SNAI2	99	48.084	Chinchilla_lanigera
ENSCGRG00001011389	Snai3	100	67.466	ENSCSAG00000003047	SNAI3	100	66.438	Chlorocebus_sabaeus
ENSCGRG00001011389	Snai3	99	47.038	ENSCSAG00000014787	SNAI2	99	47.735	Chlorocebus_sabaeus
ENSCGRG00001011389	Snai3	99	46.713	ENSCPBG00000020255	SNAI2	99	46.713	Chrysemys_picta_bellii
ENSCGRG00001011389	Snai3	99	58.923	ENSCPBG00000023474	SNAI3	99	56.902	Chrysemys_picta_bellii
ENSCGRG00001011389	Snai3	99	47.038	ENSCANG00000029656	SNAI2	99	47.735	Colobus_angolensis_palliatus
ENSCGRG00001011389	Snai3	93	70.849	ENSCANG00000031124	SNAI3	83	69.742	Colobus_angolensis_palliatus
ENSCGRG00001011389	Snai3	99	47.387	ENSCGRG00000012119	Snai2	99	48.084	Cricetulus_griseus_crigri
ENSCGRG00001011389	Snai3	100	100.000	ENSCGRG00000014932	Snai3	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001011389	Snai3	79	49.784	ENSDNOG00000035204	-	100	51.724	Dasypus_novemcinctus
ENSCGRG00001011389	Snai3	99	47.552	ENSDORG00000029620	Snai2	99	47.203	Dipodomys_ordii
ENSCGRG00001011389	Snai3	91	66.541	ENSEASG00005000614	SNAI3	87	67.669	Equus_asinus_asinus
ENSCGRG00001011389	Snai3	99	68.385	ENSECAG00000012131	SNAI3	99	69.416	Equus_caballus
ENSCGRG00001011389	Snai3	100	60.616	ENSEEUG00000000841	SNAI3	100	59.589	Erinaceus_europaeus
ENSCGRG00001011389	Snai3	99	48.276	ENSELUG00000018742	-	99	47.931	Esox_lucius
ENSCGRG00001011389	Snai3	100	64.726	ENSFCAG00000043885	SNAI3	100	63.699	Felis_catus
ENSCGRG00001011389	Snai3	99	47.038	ENSFDAG00000016958	SNAI2	99	47.735	Fukomys_damarensis
ENSCGRG00001011389	Snai3	99	59.322	ENSGAGG00000023571	SNAI3	99	56.949	Gopherus_agassizii
ENSCGRG00001011389	Snai3	99	46.713	ENSGAGG00000000426	SNAI2	99	46.713	Gopherus_agassizii
ENSCGRG00001011389	Snai3	100	71.233	ENSGGOG00000012559	SNAI3	100	72.260	Gorilla_gorilla
ENSCGRG00001011389	Snai3	99	47.038	ENSGGOG00000000959	SNAI2	99	47.735	Gorilla_gorilla
ENSCGRG00001011389	Snai3	51	72.603	ENSIPUG00000000131	snai2	99	46.552	Ictalurus_punctatus
ENSCGRG00001011389	Snai3	99	47.552	ENSSTOG00000028743	SNAI2	99	48.084	Ictidomys_tridecemlineatus
ENSCGRG00001011389	Snai3	100	77.740	ENSJJAG00000019934	Snai3	100	78.425	Jaculus_jaculus
ENSCGRG00001011389	Snai3	99	47.552	ENSLOCG00000005992	SNAI2	99	47.241	Lepisosteus_oculatus
ENSCGRG00001011389	Snai3	100	65.753	ENSLAFG00000005117	SNAI3	100	66.096	Loxodonta_africana
ENSCGRG00001011389	Snai3	99	46.367	ENSLAFG00000009299	SNAI2	99	46.367	Loxodonta_africana
ENSCGRG00001011389	Snai3	99	47.038	ENSMFAG00000046061	SNAI2	99	47.735	Macaca_fascicularis
ENSCGRG00001011389	Snai3	100	73.288	ENSMFAG00000032064	SNAI3	100	72.260	Macaca_fascicularis
ENSCGRG00001011389	Snai3	100	73.288	ENSMMUG00000008716	SNAI3	100	72.260	Macaca_mulatta
ENSCGRG00001011389	Snai3	99	47.038	ENSMMUG00000016195	SNAI2	99	47.735	Macaca_mulatta
ENSCGRG00001011389	Snai3	99	47.038	ENSMNEG00000034216	SNAI2	99	47.735	Macaca_nemestrina
ENSCGRG00001011389	Snai3	100	73.288	ENSMNEG00000045515	SNAI3	100	72.260	Macaca_nemestrina
ENSCGRG00001011389	Snai3	99	47.038	ENSMLEG00000034407	SNAI2	99	47.735	Mandrillus_leucophaeus
ENSCGRG00001011389	Snai3	92	70.741	ENSMLEG00000033191	SNAI3	92	69.630	Mandrillus_leucophaeus
ENSCGRG00001011389	Snai3	100	90.941	ENSMAUG00000001685	Snai3	100	90.941	Mesocricetus_auratus
ENSCGRG00001011389	Snai3	99	47.387	ENSMAUG00000008119	Snai2	99	48.084	Mesocricetus_auratus
ENSCGRG00001011389	Snai3	99	46.713	ENSMOCG00000006622	Snai2	99	46.713	Microtus_ochrogaster
ENSCGRG00001011389	Snai3	100	89.895	ENSMOCG00000003536	Snai3	100	89.895	Microtus_ochrogaster
ENSCGRG00001011389	Snai3	99	46.713	ENSMODG00000010173	SNAI2	99	48.276	Monodelphis_domestica
ENSCGRG00001011389	Snai3	99	48.084	MGP_CAROLIEiJ_G0020483	Snai2	99	47.751	Mus_caroli
ENSCGRG00001011389	Snai3	100	86.411	MGP_CAROLIEiJ_G0031662	Snai3	100	86.411	Mus_caroli
ENSCGRG00001011389	Snai3	99	48.084	ENSMUSG00000022676	Snai2	99	47.751	Mus_musculus
ENSCGRG00001011389	Snai3	100	87.456	ENSMUSG00000006587	Snai3	100	87.456	Mus_musculus
ENSCGRG00001011389	Snai3	99	48.084	MGP_PahariEiJ_G0016188	Snai2	99	47.751	Mus_pahari
ENSCGRG00001011389	Snai3	100	86.806	MGP_PahariEiJ_G0023260	Snai3	100	86.806	Mus_pahari
ENSCGRG00001011389	Snai3	99	48.084	MGP_SPRETEiJ_G0021379	Snai2	99	47.751	Mus_spretus
ENSCGRG00001011389	Snai3	100	87.456	MGP_SPRETEiJ_G0032780	Snai3	100	87.456	Mus_spretus
ENSCGRG00001011389	Snai3	100	64.041	ENSMPUG00000008104	SNAI3	100	65.068	Mustela_putorius_furo
ENSCGRG00001011389	Snai3	99	47.038	ENSMPUG00000010793	SNAI2	99	47.735	Mustela_putorius_furo
ENSCGRG00001011389	Snai3	99	47.038	ENSMLUG00000001086	SNAI2	99	47.735	Myotis_lucifugus
ENSCGRG00001011389	Snai3	100	78.840	ENSNGAG00000023039	Snai3	100	77.055	Nannospalax_galili
ENSCGRG00001011389	Snai3	99	47.387	ENSNLEG00000013421	SNAI2	99	48.084	Nomascus_leucogenys
ENSCGRG00001011389	Snai3	100	71.575	ENSNLEG00000000595	SNAI3	100	72.603	Nomascus_leucogenys
ENSCGRG00001011389	Snai3	98	47.902	ENSMEUG00000009510	SNAI2	100	47.902	Notamacropus_eugenii
ENSCGRG00001011389	Snai3	99	48.097	ENSOANG00000007267	SNAI2	99	47.059	Ornithorhynchus_anatinus
ENSCGRG00001011389	Snai3	100	67.474	ENSOGAG00000000419	SNAI3	100	69.204	Otolemur_garnettii
ENSCGRG00001011389	Snai3	99	47.203	ENSOARG00000013030	SNAI2	99	47.569	Ovis_aries
ENSCGRG00001011389	Snai3	90	47.388	ENSOARG00000013069	-	99	46.269	Ovis_aries
ENSCGRG00001011389	Snai3	99	47.038	ENSPPAG00000015662	SNAI2	99	47.735	Pan_paniscus
ENSCGRG00001011389	Snai3	100	70.548	ENSPPAG00000043301	SNAI3	100	71.575	Pan_paniscus
ENSCGRG00001011389	Snai3	99	64.583	ENSPPRG00000008511	SNAI3	99	63.542	Panthera_pardus
ENSCGRG00001011389	Snai3	99	47.735	ENSPPRG00000012562	-	99	48.432	Panthera_pardus
ENSCGRG00001011389	Snai3	100	70.548	ENSPTRG00000008460	SNAI3	100	71.575	Pan_troglodytes
ENSCGRG00001011389	Snai3	99	47.038	ENSPTRG00000020235	SNAI2	99	47.735	Pan_troglodytes
ENSCGRG00001011389	Snai3	99	47.038	ENSPANG00000017540	SNAI2	99	47.735	Papio_anubis
ENSCGRG00001011389	Snai3	100	72.945	ENSPANG00000000509	SNAI3	100	71.918	Papio_anubis
ENSCGRG00001011389	Snai3	99	51.827	ENSPKIG00000007872	SNAI3	99	52.159	Paramormyrops_kingsleyae
ENSCGRG00001011389	Snai3	99	46.552	ENSPKIG00000002254	SNAI2	99	48.601	Paramormyrops_kingsleyae
ENSCGRG00001011389	Snai3	99	46.713	ENSPSIG00000016395	SNAI2	99	46.713	Pelodiscus_sinensis
ENSCGRG00001011389	Snai3	76	61.304	ENSPSIG00000004262	SNAI3	91	59.565	Pelodiscus_sinensis
ENSCGRG00001011389	Snai3	56	65.217	ENSPMGG00000013179	SNAI2	99	48.084	Periophthalmus_magnuspinnatus
ENSCGRG00001011389	Snai3	99	47.387	ENSPEMG00000011739	Snai2	99	48.084	Peromyscus_maniculatus_bairdii
ENSCGRG00001011389	Snai3	99	48.276	ENSPCIG00000025156	SNAI2	99	48.276	Phascolarctos_cinereus
ENSCGRG00001011389	Snai3	100	70.890	ENSPPYG00000007643	SNAI3	100	71.918	Pongo_abelii
ENSCGRG00001011389	Snai3	99	47.038	ENSPPYG00000018578	SNAI2	99	47.735	Pongo_abelii
ENSCGRG00001011389	Snai3	99	47.387	ENSPCOG00000015656	SNAI2	99	48.084	Propithecus_coquereli
ENSCGRG00001011389	Snai3	99	47.222	ENSPVAG00000009457	SNAI2	99	48.084	Pteropus_vampyrus
ENSCGRG00001011389	Snai3	100	87.456	ENSRNOG00000013586	Snai3	100	87.456	Rattus_norvegicus
ENSCGRG00001011389	Snai3	100	73.288	ENSRBIG00000025770	SNAI3	100	72.260	Rhinopithecus_bieti
ENSCGRG00001011389	Snai3	99	47.038	ENSRBIG00000041133	SNAI2	99	47.735	Rhinopithecus_bieti
ENSCGRG00001011389	Snai3	100	73.630	ENSRROG00000032757	SNAI3	100	72.603	Rhinopithecus_roxellana
ENSCGRG00001011389	Snai3	99	47.038	ENSRROG00000032273	SNAI2	99	47.735	Rhinopithecus_roxellana
ENSCGRG00001011389	Snai3	99	47.038	ENSSBOG00000035774	SNAI2	99	47.735	Saimiri_boliviensis_boliviensis
ENSCGRG00001011389	Snai3	99	48.276	ENSSHAG00000004205	SNAI2	99	48.276	Sarcophilus_harrisii
ENSCGRG00001011389	Snai3	99	46.780	ENSSFOG00015018025	SNAI2	99	48.649	Scleropages_formosus
ENSCGRG00001011389	Snai3	99	47.231	ENSSFOG00015016115	snai3	93	47.231	Scleropages_formosus
ENSCGRG00001011389	Snai3	99	47.203	ENSSSCG00000039568	SNAI2	99	47.552	Sus_scrofa
ENSCGRG00001011389	Snai3	99	64.626	ENSTTRG00000006262	SNAI3	99	63.605	Tursiops_truncatus
ENSCGRG00001011389	Snai3	100	67.466	ENSUAMG00000020030	SNAI3	100	68.151	Ursus_americanus
ENSCGRG00001011389	Snai3	100	66.096	ENSVVUG00000003233	SNAI3	100	67.123	Vulpes_vulpes
ENSCGRG00001011389	Snai3	99	46.367	ENSVVUG00000017625	SNAI2	99	46.367	Vulpes_vulpes
ENSCGRG00001011389	Snai3	99	48.276	ENSXETG00000024006	snai2	99	48.276	Xenopus_tropicalis