EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011674 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2174 bases
Position: chrscaffold_20:30641297-30643470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001009589	La	PF05383.17	3.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001013806	-	642	-	ENSCGRP00001009589	213 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001011674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011674	-	90	89.005	ENSCGRG00001000311	-	100	89.005
ENSCGRG00001011674	-	93	85.930	ENSCGRG00001011032	-	89	85.930

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011674	-	90	84.817	ENSG00000161813	LARP4	100	82.400	Homo_sapiens
ENSCGRG00001011674	-	89	63.776	ENSACIG00000001198	larp4aa	93	68.263	Amphilophus_citrinellus
ENSCGRG00001011674	-	75	60.843	ENSACIG00000000370	-	84	60.843	Amphilophus_citrinellus
ENSCGRG00001011674	-	73	68.590	ENSAPEG00000015441	larp4ab	71	60.897	Amphiprion_percula
ENSCGRG00001011674	-	87	65.054	ENSCCAG00000030343	-	99	65.054	Cebus_capucinus
ENSCGRG00001011674	-	85	73.889	ENSCATG00000039611	-	96	73.889	Cercocebus_atys
ENSCGRG00001011674	-	90	73.298	ENSCANG00000033097	-	74	73.404	Colobus_angolensis_palliatus
ENSCGRG00001011674	-	85	99.444	ENSCGRG00000000087	-	97	99.444	Cricetulus_griseus_crigri
ENSCGRG00001011674	-	73	66.452	ENSCVAG00000001411	-	87	66.452	Cyprinodon_variegatus
ENSCGRG00001011674	-	77	72.024	ENSDARG00000074979	larp4ab	85	71.523	Danio_rerio
ENSCGRG00001011674	-	52	57.143	ENSEBUG00000005290	-	52	57.143	Eptatretus_burgeri
ENSCGRG00001011674	-	82	81.034	ENSFDAG00000003796	-	95	81.034	Fukomys_damarensis
ENSCGRG00001011674	-	90	85.340	ENSGGOG00000015230	LARP4	51	85.340	Gorilla_gorilla
ENSCGRG00001011674	-	74	63.030	ENSHBUG00000021929	-	79	63.030	Haplochromis_burtoni
ENSCGRG00001011674	-	90	77.487	ENSHGLG00100000622	-	85	76.667	Heterocephalus_glaber_male
ENSCGRG00001011674	-	90	74.869	ENSJJAG00000014649	-	94	73.077	Jaculus_jaculus
ENSCGRG00001011674	-	85	74.444	ENSMFAG00000001037	-	96	74.444	Macaca_fascicularis
ENSCGRG00001011674	-	85	74.444	ENSMMUG00000045683	-	96	74.444	Macaca_mulatta
ENSCGRG00001011674	-	85	69.444	ENSMNEG00000037799	-	96	69.444	Macaca_nemestrina
ENSCGRG00001011674	-	85	70.000	ENSMLEG00000038232	-	96	70.000	Mandrillus_leucophaeus
ENSCGRG00001011674	-	84	84.358	ENSMICG00000046883	-	99	84.358	Microcebus_murinus
ENSCGRG00001011674	-	90	78.010	ENSMICG00000030156	-	92	72.864	Microcebus_murinus
ENSCGRG00001011674	-	67	76.923	ENSMODG00000004844	-	67	76.923	Monodelphis_domestica
ENSCGRG00001011674	-	69	78.378	ENSMALG00000018631	larp4aa	83	69.753	Monopterus_albus
ENSCGRG00001011674	-	72	65.432	ENSMALG00000015637	-	70	65.432	Monopterus_albus
ENSCGRG00001011674	-	90	85.340	MGP_CAROLIEiJ_G0020281	Larp4	50	85.340	Mus_caroli
ENSCGRG00001011674	-	77	64.535	ENSNBRG00000015675	larp4ab	85	61.392	Neolamprologus_brichardi
ENSCGRG00001011674	-	64	68.613	ENSORLG00000018835	-	65	68.613	Oryzias_latipes
ENSCGRG00001011674	-	64	68.613	ENSORLG00020009602	-	65	68.613	Oryzias_latipes_hni
ENSCGRG00001011674	-	69	65.986	ENSORLG00015005865	-	70	65.986	Oryzias_latipes_hsok
ENSCGRG00001011674	-	79	72.024	ENSOMEG00000019749	larp4aa	80	70.000	Oryzias_melastigma
ENSCGRG00001011674	-	84	56.522	ENSOMEG00000008561	-	95	56.522	Oryzias_melastigma
ENSCGRG00001011674	-	65	77.536	ENSPMGG00000023289	-	90	77.536	Periophthalmus_magnuspinnatus
ENSCGRG00001011674	-	72	64.052	ENSPMAG00000001038	-	61	64.052	Petromyzon_marinus
ENSCGRG00001011674	-	77	68.421	ENSPREG00000016263	larp4ab	75	67.925	Poecilia_reticulata
ENSCGRG00001011674	-	65	80.435	ENSPPYG00000006330	-	63	80.435	Pongo_abelii
ENSCGRG00001011674	-	74	63.030	ENSPNYG00000000915	-	68	63.030	Pundamilia_nyererei
ENSCGRG00001011674	-	67	75.524	ENSRNOG00000057943	AABR07058884.2	67	75.524	Rattus_norvegicus
ENSCGRG00001011674	-	82	67.816	ENSSBOG00000035851	-	95	67.816	Saimiri_boliviensis_boliviensis
ENSCGRG00001011674	-	72	76.471	ENSSPAG00000007222	larp4aa	74	76.224	Stegastes_partitus
ENSCGRG00001011674	-	89	62.963	ENSTRUG00000015939	larp4aa	51	62.963	Takifugu_rubripes
ENSCGRG00001011674	-	77	67.836	ENSXCOG00000019635	larp4ab	75	67.081	Xiphophorus_couchianus