EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011698 (Gene tree)
Gene ID: -
Gene Symbol: Sfpq
Alias: 1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|D4Ertd314e|PSF|REP1
Full Name: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 10721 bases
Position: chrscaffold_2:26096091-26106811
Accession: 1918764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001009624	RRM_1	PF00076.22	3.3e-30	1	2
ENSCGRP00001009624	RRM_1	PF00076.22	3.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001013843	-	5201	-	ENSCGRP00001009624	703 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001011698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011698	Sfpq	54	66.150	ENSCGRG00001018368	Pspc1	91	57.764

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011698	Sfpq	69	98.347	ENSG00000116560	SFPQ	97	99.074	Homo_sapiens
ENSCGRG00001011698	Sfpq	61	74.596	ENSAPOG00000024257	sfpq	63	74.550	Acanthochromis_polyacanthus
ENSCGRG00001011698	Sfpq	63	99.318	ENSAMEG00000000815	SFPQ	100	99.318	Ailuropoda_melanoleuca
ENSCGRG00001011698	Sfpq	79	61.702	ENSACIG00000000905	sfpq	72	70.252	Amphilophus_citrinellus
ENSCGRG00001011698	Sfpq	64	70.626	ENSAOCG00000002889	sfpq	61	73.874	Amphiprion_ocellaris
ENSCGRG00001011698	Sfpq	64	70.626	ENSAPEG00000016556	sfpq	61	73.874	Amphiprion_percula
ENSCGRG00001011698	Sfpq	62	76.765	ENSATEG00000002981	sfpq	67	76.082	Anabas_testudineus
ENSCGRG00001011698	Sfpq	94	96.154	ENSANAG00000027438	-	69	82.222	Aotus_nancymaae
ENSCGRG00001011698	Sfpq	50	76.000	ENSANAG00000037798	-	99	75.714	Aotus_nancymaae
ENSCGRG00001011698	Sfpq	50	75.141	ENSANAG00000021268	-	100	74.074	Aotus_nancymaae
ENSCGRG00001011698	Sfpq	63	72.523	ENSACLG00000022332	sfpq	63	72.748	Astatotilapia_calliptera
ENSCGRG00001011698	Sfpq	68	67.086	ENSAMXG00000011538	sfpq	66	71.910	Astyanax_mexicanus
ENSCGRG00001011698	Sfpq	96	89.280	ENSBTAG00000016328	SFPQ	85	91.181	Bos_taurus
ENSCGRG00001011698	Sfpq	69	98.140	ENSCJAG00000001431	SFPQ	96	87.665	Callithrix_jacchus
ENSCGRG00001011698	Sfpq	85	83.555	ENSCAFG00000018271	-	67	92.000	Canis_familiaris
ENSCGRG00001011698	Sfpq	85	80.763	ENSCAFG00000017608	-	66	91.778	Canis_familiaris
ENSCGRG00001011698	Sfpq	83	94.845	ENSCAFG00000003595	-	90	92.475	Canis_familiaris
ENSCGRG00001011698	Sfpq	50	90.598	ENSCAFG00020010702	-	100	90.598	Canis_lupus_dingo
ENSCGRG00001011698	Sfpq	85	83.416	ENSCAFG00020004881	-	67	92.000	Canis_lupus_dingo
ENSCGRG00001011698	Sfpq	85	92.845	ENSCHIG00000023097	SFPQ	84	91.181	Capra_hircus
ENSCGRG00001011698	Sfpq	50	85.100	ENSTSYG00000035106	-	98	85.100	Carlito_syrichta
ENSCGRG00001011698	Sfpq	50	99.430	ENSTSYG00000037120	-	100	99.430	Carlito_syrichta
ENSCGRG00001011698	Sfpq	50	90.883	ENSCPOG00000015018	-	100	88.981	Cavia_porcellus
ENSCGRG00001011698	Sfpq	69	97.934	ENSCCAG00000029361	-	85	92.371	Cebus_capucinus
ENSCGRG00001011698	Sfpq	60	94.811	ENSCATG00000036179	-	80	89.299	Cercocebus_atys
ENSCGRG00001011698	Sfpq	69	72.301	ENSCATG00000032664	-	85	71.921	Cercocebus_atys
ENSCGRG00001011698	Sfpq	50	99.430	ENSCLAG00000009583	-	100	99.430	Chinchilla_lanigera
ENSCGRG00001011698	Sfpq	69	98.347	ENSCSAG00000001082	SFPQ	96	87.959	Chlorocebus_sabaeus
ENSCGRG00001011698	Sfpq	54	94.737	ENSCHOG00000009131	SFPQ	100	94.737	Choloepus_hoffmanni
ENSCGRG00001011698	Sfpq	63	92.205	ENSCPBG00000018674	SFPQ	69	91.982	Chrysemys_picta_bellii
ENSCGRG00001011698	Sfpq	50	99.430	ENSCANG00000028087	-	100	99.430	Colobus_angolensis_palliatus
ENSCGRG00001011698	Sfpq	61	100.000	ENSCGRG00000010128	Sfpq	95	100.000	Cricetulus_griseus_crigri
ENSCGRG00001011698	Sfpq	99	55.571	ENSCSEG00000007852	sfpq	67	71.622	Cynoglossus_semilaevis
ENSCGRG00001011698	Sfpq	89	56.439	ENSCVAG00000019538	sfpq	64	67.371	Cyprinodon_variegatus
ENSCGRG00001011698	Sfpq	82	60.172	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSCGRG00001011698	Sfpq	69	97.934	ENSDNOG00000049454	SFPQ	85	92.512	Dasypus_novemcinctus
ENSCGRG00001011698	Sfpq	100	95.875	ENSDORG00000008109	Sfpq	100	95.875	Dipodomys_ordii
ENSCGRG00001011698	Sfpq	61	92.575	ENSETEG00000001095	SFPQ	61	92.575	Echinops_telfairi
ENSCGRG00001011698	Sfpq	69	98.347	ENSEASG00005012012	SFPQ	85	92.679	Equus_asinus_asinus
ENSCGRG00001011698	Sfpq	69	98.347	ENSECAG00000000642	SFPQ	85	92.679	Equus_caballus
ENSCGRG00001011698	Sfpq	65	69.935	ENSELUG00000023145	sfpq	66	71.694	Esox_lucius
ENSCGRG00001011698	Sfpq	96	92.604	ENSFCAG00000042862	SFPQ	96	91.124	Felis_catus
ENSCGRG00001011698	Sfpq	50	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSCGRG00001011698	Sfpq	50	90.313	ENSFDAG00000017723	-	100	90.652	Fukomys_damarensis
ENSCGRG00001011698	Sfpq	63	66.143	ENSFHEG00000015200	sfpq	57	67.713	Fundulus_heteroclitus
ENSCGRG00001011698	Sfpq	61	73.782	ENSGMOG00000011957	sfpq	65	73.782	Gadus_morhua
ENSCGRG00001011698	Sfpq	62	74.943	ENSGMOG00000011950	SFPQ	74	75.000	Gadus_morhua
ENSCGRG00001011698	Sfpq	72	85.149	ENSGALG00000002514	SFPQ	68	93.483	Gallus_gallus
ENSCGRG00001011698	Sfpq	90	53.882	ENSGAFG00000014571	sfpq	59	75.073	Gambusia_affinis
ENSCGRG00001011698	Sfpq	79	64.452	ENSGACG00000002034	sfpq	68	74.654	Gasterosteus_aculeatus
ENSCGRG00001011698	Sfpq	75	99.076	ENSGGOG00000026354	SFPQ	100	99.430	Gorilla_gorilla
ENSCGRG00001011698	Sfpq	63	72.523	ENSHBUG00000016818	sfpq	63	72.748	Haplochromis_burtoni
ENSCGRG00001011698	Sfpq	68	98.129	ENSHGLG00000012001	SFPQ	86	92.053	Heterocephalus_glaber_female
ENSCGRG00001011698	Sfpq	50	99.430	ENSHGLG00100004136	-	100	99.430	Heterocephalus_glaber_male
ENSCGRG00001011698	Sfpq	61	74.596	ENSHCOG00000008612	sfpq	70	68.372	Hippocampus_comes
ENSCGRG00001011698	Sfpq	66	67.591	ENSIPUG00000013076	SFPQ	73	72.540	Ictalurus_punctatus
ENSCGRG00001011698	Sfpq	50	99.430	ENSSTOG00000014004	-	100	99.430	Ictidomys_tridecemlineatus
ENSCGRG00001011698	Sfpq	69	98.554	ENSJJAG00000015633	Sfpq	68	98.745	Jaculus_jaculus
ENSCGRG00001011698	Sfpq	90	56.012	ENSKMAG00000000238	sfpq	54	71.034	Kryptolebias_marmoratus
ENSCGRG00001011698	Sfpq	62	76.256	ENSLACG00000014728	SFPQ	70	80.324	Latimeria_chalumnae
ENSCGRG00001011698	Sfpq	89	62.187	ENSLOCG00000001067	sfpq	68	81.912	Lepisosteus_oculatus
ENSCGRG00001011698	Sfpq	97	83.994	ENSLAFG00000015951	SFPQ	85	92.013	Loxodonta_africana
ENSCGRG00001011698	Sfpq	69	98.140	ENSMFAG00000000797	SFPQ	85	92.371	Macaca_fascicularis
ENSCGRG00001011698	Sfpq	69	98.140	ENSMMUG00000019154	SFPQ	85	94.030	Macaca_mulatta
ENSCGRG00001011698	Sfpq	69	98.347	ENSMNEG00000038895	SFPQ	85	92.537	Macaca_nemestrina
ENSCGRG00001011698	Sfpq	50	96.296	ENSMLEG00000010643	-	100	96.296	Mandrillus_leucophaeus
ENSCGRG00001011698	Sfpq	78	67.329	ENSMAMG00000007875	sfpq	66	77.726	Mastacembelus_armatus
ENSCGRG00001011698	Sfpq	99	54.545	ENSMZEG00005026091	sfpq	64	72.748	Maylandia_zebra
ENSCGRG00001011698	Sfpq	54	91.049	ENSMGAG00000004237	SFPQ	100	91.049	Meleagris_gallopavo
ENSCGRG00001011698	Sfpq	100	99.289	ENSMAUG00000006402	Sfpq	100	99.289	Mesocricetus_auratus
ENSCGRG00001011698	Sfpq	69	98.347	ENSMICG00000027265	SFPQ	96	92.330	Microcebus_murinus
ENSCGRG00001011698	Sfpq	69	96.273	ENSMOCG00000019075	Sfpq	100	96.273	Microtus_ochrogaster
ENSCGRG00001011698	Sfpq	81	62.671	ENSMMOG00000001074	sfpq	65	74.651	Mola_mola
ENSCGRG00001011698	Sfpq	63	95.291	ENSMODG00000017937	SFPQ	67	95.111	Monodelphis_domestica
ENSCGRG00001011698	Sfpq	61	75.116	ENSMALG00000010381	sfpq	64	75.584	Monopterus_albus
ENSCGRG00001011698	Sfpq	100	97.727	MGP_CAROLIEiJ_G0026487	Sfpq	100	97.727	Mus_caroli
ENSCGRG00001011698	Sfpq	100	97.866	ENSMUSG00000028820	Sfpq	100	97.866	Mus_musculus
ENSCGRG00001011698	Sfpq	100	97.155	MGP_PahariEiJ_G0028818	Sfpq	100	97.155	Mus_pahari
ENSCGRG00001011698	Sfpq	100	97.866	MGP_SPRETEiJ_G0027466	Sfpq	100	97.866	Mus_spretus
ENSCGRG00001011698	Sfpq	64	96.222	ENSMLUG00000027090	SFPQ	100	96.222	Myotis_lucifugus
ENSCGRG00001011698	Sfpq	69	98.351	ENSNGAG00000000888	Sfpq	68	98.330	Nannospalax_galili
ENSCGRG00001011698	Sfpq	98	55.476	ENSNBRG00000017479	sfpq	64	72.973	Neolamprologus_brichardi
ENSCGRG00001011698	Sfpq	50	99.430	ENSNLEG00000035521	-	100	99.430	Nomascus_leucogenys
ENSCGRG00001011698	Sfpq	66	95.900	ENSMEUG00000014082	SFPQ	64	94.667	Notamacropus_eugenii
ENSCGRG00001011698	Sfpq	72	93.097	ENSOPRG00000013696	SFPQ	64	98.218	Ochotona_princeps
ENSCGRG00001011698	Sfpq	66	87.013	ENSODEG00000005485	SFPQ	85	86.422	Octodon_degus
ENSCGRG00001011698	Sfpq	63	73.649	ENSONIG00000017737	sfpq	64	73.874	Oreochromis_niloticus
ENSCGRG00001011698	Sfpq	50	96.866	ENSOANG00000008789	-	100	96.866	Ornithorhynchus_anatinus
ENSCGRG00001011698	Sfpq	73	89.210	ENSOCUG00000001877	SFPQ	86	99.544	Oryctolagus_cuniculus
ENSCGRG00001011698	Sfpq	87	57.165	ENSORLG00000007459	sfpq	57	71.694	Oryzias_latipes
ENSCGRG00001011698	Sfpq	87	58.003	ENSORLG00020011818	sfpq	57	71.694	Oryzias_latipes_hni
ENSCGRG00001011698	Sfpq	84	56.964	ENSORLG00015002131	sfpq	58	71.034	Oryzias_latipes_hsok
ENSCGRG00001011698	Sfpq	99	52.437	ENSOMEG00000018020	sfpq	58	69.820	Oryzias_melastigma
ENSCGRG00001011698	Sfpq	75	96.762	ENSOGAG00000027710	SFPQ	99	96.762	Otolemur_garnettii
ENSCGRG00001011698	Sfpq	76	99.306	ENSOARG00000019439	SFPQ	80	99.306	Ovis_aries
ENSCGRG00001011698	Sfpq	50	99.148	ENSPPRG00000015478	-	100	99.148	Panthera_pardus
ENSCGRG00001011698	Sfpq	50	99.430	ENSPTIG00000007710	-	100	99.430	Panthera_tigris_altaica
ENSCGRG00001011698	Sfpq	69	92.149	ENSPTRG00000000518	SFPQ	85	87.396	Pan_troglodytes
ENSCGRG00001011698	Sfpq	100	80.654	ENSPANG00000005380	SFPQ	72	98.357	Papio_anubis
ENSCGRG00001011698	Sfpq	78	65.823	ENSPKIG00000023035	sfpq	73	79.493	Paramormyrops_kingsleyae
ENSCGRG00001011698	Sfpq	61	94.664	ENSPSIG00000011494	SFPQ	100	94.664	Pelodiscus_sinensis
ENSCGRG00001011698	Sfpq	61	69.249	ENSPMGG00000023883	sfpq	62	77.391	Periophthalmus_magnuspinnatus
ENSCGRG00001011698	Sfpq	67	99.788	ENSPEMG00000009794	Sfpq	97	99.788	Peromyscus_maniculatus_bairdii
ENSCGRG00001011698	Sfpq	63	95.740	ENSPCIG00000000923	SFPQ	64	95.111	Phascolarctos_cinereus
ENSCGRG00001011698	Sfpq	88	55.008	ENSPFOG00000003127	sfpq	73	66.816	Poecilia_formosa
ENSCGRG00001011698	Sfpq	90	53.149	ENSPREG00000008060	sfpq	59	69.213	Poecilia_reticulata
ENSCGRG00001011698	Sfpq	69	98.347	ENSPPYG00000001560	SFPQ	85	92.371	Pongo_abelii
ENSCGRG00001011698	Sfpq	77	98.368	ENSPCAG00000006164	SFPQ	77	98.368	Procavia_capensis
ENSCGRG00001011698	Sfpq	69	98.347	ENSPCOG00000027127	SFPQ	85	95.025	Propithecus_coquereli
ENSCGRG00001011698	Sfpq	96	89.971	ENSPVAG00000001865	SFPQ	96	88.018	Pteropus_vampyrus
ENSCGRG00001011698	Sfpq	63	72.523	ENSPNYG00000007494	sfpq	62	72.523	Pundamilia_nyererei
ENSCGRG00001011698	Sfpq	74	64.232	ENSPNAG00000002128	sfpq	73	72.707	Pygocentrus_nattereri
ENSCGRG00001011698	Sfpq	100	95.590	ENSRNOG00000058461	Sfpq	86	94.658	Rattus_norvegicus
ENSCGRG00001011698	Sfpq	99	72.262	ENSRBIG00000035286	SFPQ	100	99.430	Rhinopithecus_bieti
ENSCGRG00001011698	Sfpq	68	100.000	ENSRROG00000040992	SFPQ	100	99.430	Rhinopithecus_roxellana
ENSCGRG00001011698	Sfpq	50	99.430	ENSSBOG00000024972	-	100	99.430	Saimiri_boliviensis_boliviensis
ENSCGRG00001011698	Sfpq	50	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSCGRG00001011698	Sfpq	61	90.869	ENSSHAG00000016107	-	97	90.200	Sarcophilus_harrisii
ENSCGRG00001011698	Sfpq	63	75.283	ENSSFOG00015009289	sfpq	79	77.778	Scleropages_formosus
ENSCGRG00001011698	Sfpq	61	77.083	ENSSMAG00000018201	sfpq	67	73.543	Scophthalmus_maximus
ENSCGRG00001011698	Sfpq	61	76.620	ENSSDUG00000008402	sfpq	65	78.291	Seriola_dumerili
ENSCGRG00001011698	Sfpq	61	76.620	ENSSLDG00000018917	sfpq	65	78.291	Seriola_lalandi_dorsalis
ENSCGRG00001011698	Sfpq	52	99.457	ENSSARG00000006409	SFPQ	100	99.457	Sorex_araneus
ENSCGRG00001011698	Sfpq	85	93.844	ENSSSCG00000035690	SFPQ	85	92.180	Sus_scrofa
ENSCGRG00001011698	Sfpq	61	94.896	ENSTGUG00000001722	SFPQ	100	94.896	Taeniopygia_guttata
ENSCGRG00001011698	Sfpq	63	74.607	ENSTRUG00000003783	sfpq	64	75.450	Takifugu_rubripes
ENSCGRG00001011698	Sfpq	85	90.516	ENSTTRG00000013930	SFPQ	85	88.353	Tursiops_truncatus
ENSCGRG00001011698	Sfpq	50	98.374	ENSUAMG00000026758	SFPQ	85	98.374	Ursus_americanus
ENSCGRG00001011698	Sfpq	50	96.581	ENSUMAG00000008056	-	100	96.581	Ursus_maritimus
ENSCGRG00001011698	Sfpq	63	88.964	ENSVPAG00000006960	-	67	88.964	Vicugna_pacos
ENSCGRG00001011698	Sfpq	50	88.319	ENSVVUG00000000874	-	100	88.319	Vulpes_vulpes
ENSCGRG00001011698	Sfpq	65	79.957	ENSXETG00000009682	sfpq	100	84.830	Xenopus_tropicalis