EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001011981 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 1575 bases
Position: chrscaffold_0:162087158-162088732
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001009980	CAF1	PF04857.20	6.8e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001014200	-	1374	-	ENSCGRP00001009980	457 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001011981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001011981's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001011981	-	99	76.880	ENSCGRG00001007470	-	100	76.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001011981	-	99	66.038	ENSG00000146453	PNLDC1	99	66.038	Homo_sapiens
ENSCGRG00001011981	-	99	64.272	ENSAMEG00000015371	PNLDC1	99	64.272	Ailuropoda_melanoleuca
ENSCGRG00001011981	-	93	46.184	ENSAPLG00000007014	PNLDC1	97	46.184	Anas_platyrhynchos
ENSCGRG00001011981	-	99	47.547	ENSACAG00000013667	PNLDC1	99	47.547	Anolis_carolinensis
ENSCGRG00001011981	-	99	65.913	ENSANAG00000034713	PNLDC1	100	65.949	Aotus_nancymaae
ENSCGRG00001011981	-	93	65.805	ENSBTAG00000015166	PNLDC1	95	65.805	Bos_taurus
ENSCGRG00001011981	-	75	35.000	ENSBTAG00000018097	PARN	61	35.000	Bos_taurus
ENSCGRG00001011981	-	99	65.160	ENSCJAG00000011865	PNLDC1	100	65.160	Callithrix_jacchus
ENSCGRG00001011981	-	99	65.348	ENSCAFG00000000740	PNLDC1	100	65.348	Canis_familiaris
ENSCGRG00001011981	-	99	64.190	ENSCAFG00020017742	PNLDC1	100	64.190	Canis_lupus_dingo
ENSCGRG00001011981	-	99	62.642	ENSCHIG00000003141	PNLDC1	100	62.642	Capra_hircus
ENSCGRG00001011981	-	99	64.218	ENSTSYG00000005606	PNLDC1	100	64.218	Carlito_syrichta
ENSCGRG00001011981	-	99	50.503	ENSCAPG00000011893	PNLDC1	100	50.503	Cavia_aperea
ENSCGRG00001011981	-	99	60.728	ENSCPOG00000019565	PNLDC1	100	60.728	Cavia_porcellus
ENSCGRG00001011981	-	76	33.571	ENSCPOG00000002263	PARN	58	33.571	Cavia_porcellus
ENSCGRG00001011981	-	99	66.102	ENSCCAG00000026232	PNLDC1	100	66.102	Cebus_capucinus
ENSCGRG00001011981	-	99	65.913	ENSCATG00000033196	PNLDC1	100	65.913	Cercocebus_atys
ENSCGRG00001011981	-	99	63.019	ENSCLAG00000003228	PNLDC1	99	63.019	Chinchilla_lanigera
ENSCGRG00001011981	-	94	65.029	ENSCSAG00000012478	PNLDC1	98	65.029	Chlorocebus_sabaeus
ENSCGRG00001011981	-	95	50.292	ENSCPBG00000004050	PNLDC1	100	51.267	Chrysemys_picta_bellii
ENSCGRG00001011981	-	68	34.459	ENSCING00000010142	-	66	34.459	Ciona_intestinalis
ENSCGRG00001011981	-	94	65.613	ENSCANG00000043076	PNLDC1	97	65.613	Colobus_angolensis_palliatus
ENSCGRG00001011981	-	100	95.513	ENSCGRG00000003103	-	100	95.513	Cricetulus_griseus_crigri
ENSCGRG00001011981	-	99	76.880	ENSCGRG00000010221	-	100	76.880	Cricetulus_griseus_crigri
ENSCGRG00001011981	-	99	64.098	ENSDNOG00000013709	PNLDC1	100	64.098	Dasypus_novemcinctus
ENSCGRG00001011981	-	99	59.475	ENSDORG00000011517	Pnldc1	99	65.495	Dipodomys_ordii
ENSCGRG00001011981	-	91	56.740	ENSETEG00000007587	PNLDC1	99	56.740	Echinops_telfairi
ENSCGRG00001011981	-	99	61.950	ENSEASG00005019029	PNLDC1	100	61.950	Equus_asinus_asinus
ENSCGRG00001011981	-	99	65.160	ENSECAG00000012898	PNLDC1	100	65.160	Equus_caballus
ENSCGRG00001011981	-	63	65.625	ENSEEUG00000005717	-	86	65.625	Erinaceus_europaeus
ENSCGRG00001011981	-	99	65.537	ENSFCAG00000002848	PNLDC1	100	65.537	Felis_catus
ENSCGRG00001011981	-	92	46.429	ENSFALG00000012081	PNLDC1	99	46.429	Ficedula_albicollis
ENSCGRG00001011981	-	99	63.653	ENSFDAG00000021334	PNLDC1	100	63.653	Fukomys_damarensis
ENSCGRG00001011981	-	76	46.556	ENSGALG00000011624	PNLDC1	82	46.556	Gallus_gallus
ENSCGRG00001011981	-	99	52.166	ENSGAGG00000015276	PNLDC1	100	53.402	Gopherus_agassizii
ENSCGRG00001011981	-	99	65.725	ENSGGOG00000014077	PNLDC1	100	65.725	Gorilla_gorilla
ENSCGRG00001011981	-	99	64.218	ENSHGLG00000006889	PNLDC1	100	64.218	Heterocephalus_glaber_female
ENSCGRG00001011981	-	99	64.218	ENSHGLG00100018275	PNLDC1	100	64.218	Heterocephalus_glaber_male
ENSCGRG00001011981	-	99	66.919	ENSSTOG00000005595	PNLDC1	99	66.919	Ictidomys_tridecemlineatus
ENSCGRG00001011981	-	98	63.654	ENSJJAG00000009937	Pnldc1	99	63.654	Jaculus_jaculus
ENSCGRG00001011981	-	59	64.762	ENSLAFG00000030189	PNLDC1	92	64.762	Loxodonta_africana
ENSCGRG00001011981	-	99	65.913	ENSMFAG00000041296	PNLDC1	100	65.913	Macaca_fascicularis
ENSCGRG00001011981	-	99	65.913	ENSMMUG00000004181	PNLDC1	100	65.913	Macaca_mulatta
ENSCGRG00001011981	-	99	65.913	ENSMNEG00000034271	PNLDC1	100	65.913	Macaca_nemestrina
ENSCGRG00001011981	-	99	63.089	ENSMLEG00000044059	PNLDC1	100	63.089	Mandrillus_leucophaeus
ENSCGRG00001011981	-	94	45.294	ENSMGAG00000012470	PNLDC1	97	45.294	Meleagris_gallopavo
ENSCGRG00001011981	-	99	65.041	ENSMAUG00000012298	Pnldc1	100	65.041	Mesocricetus_auratus
ENSCGRG00001011981	-	99	66.667	ENSMICG00000008021	PNLDC1	100	66.667	Microcebus_murinus
ENSCGRG00001011981	-	99	70.356	ENSMOCG00000014287	Pnldc1	100	70.356	Microtus_ochrogaster
ENSCGRG00001011981	-	100	57.223	ENSMODG00000007420	PNLDC1	100	57.223	Monodelphis_domestica
ENSCGRG00001011981	-	99	69.115	MGP_CAROLIEiJ_G0021045	Pnldc1	100	69.115	Mus_caroli
ENSCGRG00001011981	-	99	69.303	ENSMUSG00000073460	Pnldc1	100	70.794	Mus_musculus
ENSCGRG00001011981	-	99	69.868	MGP_PahariEiJ_G0023361	Pnldc1	100	69.868	Mus_pahari
ENSCGRG00001011981	-	99	69.115	MGP_SPRETEiJ_G0021975	Pnldc1	100	69.115	Mus_spretus
ENSCGRG00001011981	-	99	65.152	ENSMPUG00000004920	PNLDC1	99	65.152	Mustela_putorius_furo
ENSCGRG00001011981	-	99	64.030	ENSMLUG00000000747	PNLDC1	100	64.030	Myotis_lucifugus
ENSCGRG00001011981	-	99	69.549	ENSNGAG00000017714	Pnldc1	100	69.549	Nannospalax_galili
ENSCGRG00001011981	-	75	35.000	ENSNLEG00000010241	PARN	57	35.000	Nomascus_leucogenys
ENSCGRG00001011981	-	94	64.892	ENSNLEG00000011282	PNLDC1	98	64.892	Nomascus_leucogenys
ENSCGRG00001011981	-	62	49.840	ENSMEUG00000011926	-	64	49.840	Notamacropus_eugenii
ENSCGRG00001011981	-	77	61.364	ENSOPRG00000003813	PNLDC1	79	61.364	Ochotona_princeps
ENSCGRG00001011981	-	99	64.783	ENSODEG00000008047	PNLDC1	100	64.783	Octodon_degus
ENSCGRG00001011981	-	99	47.909	ENSOANG00000012199	PNLDC1	100	47.909	Ornithorhynchus_anatinus
ENSCGRG00001011981	-	99	64.972	ENSOCUG00000013867	PNLDC1	100	64.972	Oryctolagus_cuniculus
ENSCGRG00001011981	-	99	66.541	ENSOGAG00000007331	PNLDC1	100	66.541	Otolemur_garnettii
ENSCGRG00001011981	-	99	62.712	ENSOARG00000004585	PNLDC1	100	62.712	Ovis_aries
ENSCGRG00001011981	-	99	65.977	ENSPPAG00000026651	PNLDC1	100	65.977	Pan_paniscus
ENSCGRG00001011981	-	99	65.537	ENSPPRG00000012854	PNLDC1	100	65.537	Panthera_pardus
ENSCGRG00001011981	-	94	65.191	ENSPTIG00000011501	PNLDC1	95	65.191	Panthera_tigris_altaica
ENSCGRG00001011981	-	99	65.977	ENSPTRG00000018762	PNLDC1	100	65.977	Pan_troglodytes
ENSCGRG00001011981	-	99	66.102	ENSPANG00000022009	PNLDC1	100	66.102	Papio_anubis
ENSCGRG00001011981	-	99	70.677	ENSPEMG00000016301	Pnldc1	100	70.677	Peromyscus_maniculatus_bairdii
ENSCGRG00001011981	-	79	57.991	ENSPCIG00000023412	PNLDC1	100	57.991	Phascolarctos_cinereus
ENSCGRG00001011981	-	99	62.830	ENSPPYG00000017148	PNLDC1	100	62.830	Pongo_abelii
ENSCGRG00001011981	-	99	59.357	ENSPCAG00000014169	PNLDC1	99	59.357	Procavia_capensis
ENSCGRG00001011981	-	99	67.043	ENSPCOG00000025722	PNLDC1	100	67.043	Propithecus_coquereli
ENSCGRG00001011981	-	71	67.273	ENSPVAG00000005325	PNLDC1	73	67.273	Pteropus_vampyrus
ENSCGRG00001011981	-	99	70.189	ENSRNOG00000023140	Pnldc1	100	70.189	Rattus_norvegicus
ENSCGRG00001011981	-	99	65.913	ENSRBIG00000033806	PNLDC1	100	65.913	Rhinopithecus_bieti
ENSCGRG00001011981	-	94	66.206	ENSRROG00000043919	PNLDC1	97	66.206	Rhinopithecus_roxellana
ENSCGRG00001011981	-	99	66.102	ENSSBOG00000019135	PNLDC1	100	66.102	Saimiri_boliviensis_boliviensis
ENSCGRG00001011981	-	99	61.029	ENSSHAG00000015192	PNLDC1	98	61.029	Sarcophilus_harrisii
ENSCGRG00001011981	-	52	52.797	ENSSPUG00000004627	PNLDC1	99	48.430	Sphenodon_punctatus
ENSCGRG00001011981	-	95	63.086	ENSSSCG00000004046	PNLDC1	99	63.086	Sus_scrofa
ENSCGRG00001011981	-	89	47.325	ENSTGUG00000011418	PNLDC1	99	47.325	Taeniopygia_guttata
ENSCGRG00001011981	-	95	56.275	ENSTBEG00000009131	PNLDC1	98	56.275	Tupaia_belangeri
ENSCGRG00001011981	-	71	61.658	ENSTTRG00000010409	PNLDC1	73	61.658	Tursiops_truncatus
ENSCGRG00001011981	-	99	55.453	ENSUAMG00000015783	PNLDC1	99	55.453	Ursus_americanus
ENSCGRG00001011981	-	93	60.707	ENSUMAG00000011903	PNLDC1	99	60.588	Ursus_maritimus
ENSCGRG00001011981	-	62	35.338	ENSVPAG00000008968	PARN	50	35.338	Vicugna_pacos
ENSCGRG00001011981	-	95	65.949	ENSVVUG00000006586	PNLDC1	99	65.503	Vulpes_vulpes