EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001012072 (Gene tree)
Gene ID: -
Gene Symbol: Lig4
Alias: 5830471N16Rik|DNA ligase IV|tiny
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 2739 bases
Position: chrscaffold_21:28555150-28557888
Accession: 100754640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010095	RNA_ligase	PF09414.10	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001014315	-	2739	-	ENSCGRP00001010095	912 (aa)	XP_003495812	G3GTP0

Gene Model

Click here to download ENSCGRG00001012072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012072	Lig4	100	86.952	ENSG00000174405	LIG4	100	86.952	Homo_sapiens
ENSCGRG00001012072	Lig4	99	64.984	ENSAPOG00000000866	lig4	99	64.984	Acanthochromis_polyacanthus
ENSCGRG00001012072	Lig4	100	83.772	ENSAMEG00000019685	LIG4	99	83.772	Ailuropoda_melanoleuca
ENSCGRG00001012072	Lig4	99	65.824	ENSACIG00000018309	lig4	99	65.824	Amphilophus_citrinellus
ENSCGRG00001012072	Lig4	99	64.435	ENSAOCG00000011768	lig4	99	64.435	Amphiprion_ocellaris
ENSCGRG00001012072	Lig4	99	64.654	ENSAPEG00000017815	lig4	99	64.654	Amphiprion_percula
ENSCGRG00001012072	Lig4	99	64.796	ENSATEG00000005583	lig4	99	64.796	Anabas_testudineus
ENSCGRG00001012072	Lig4	97	73.273	ENSAPLG00000001673	LIG4	99	73.273	Anas_platyrhynchos
ENSCGRG00001012072	Lig4	99	74.668	ENSACAG00000014566	LIG4	99	74.668	Anolis_carolinensis
ENSCGRG00001012072	Lig4	100	86.404	ENSANAG00000012446	LIG4	100	86.404	Aotus_nancymaae
ENSCGRG00001012072	Lig4	99	64.841	ENSACLG00000027051	lig4	99	65.165	Astatotilapia_calliptera
ENSCGRG00001012072	Lig4	99	64.192	ENSAMXG00000008192	lig4	94	64.192	Astyanax_mexicanus
ENSCGRG00001012072	Lig4	100	85.197	ENSBTAG00000015868	LIG4	100	85.197	Bos_taurus
ENSCGRG00001012072	Lig4	100	85.746	ENSCJAG00000014689	LIG4	100	85.746	Callithrix_jacchus
ENSCGRG00001012072	Lig4	100	85.636	ENSCAFG00000006031	LIG4	100	85.636	Canis_familiaris
ENSCGRG00001012072	Lig4	100	85.636	ENSCAFG00020021230	LIG4	100	85.636	Canis_lupus_dingo
ENSCGRG00001012072	Lig4	100	84.868	ENSCHIG00000001019	LIG4	100	84.868	Capra_hircus
ENSCGRG00001012072	Lig4	99	86.062	ENSCAPG00000006284	LIG4	99	86.062	Cavia_aperea
ENSCGRG00001012072	Lig4	100	85.965	ENSCPOG00000014266	LIG4	100	85.965	Cavia_porcellus
ENSCGRG00001012072	Lig4	100	85.746	ENSCCAG00000019971	LIG4	100	85.746	Cebus_capucinus
ENSCGRG00001012072	Lig4	100	86.732	ENSCATG00000021075	LIG4	100	86.732	Cercocebus_atys
ENSCGRG00001012072	Lig4	100	86.513	ENSCLAG00000003376	LIG4	100	86.513	Chinchilla_lanigera
ENSCGRG00001012072	Lig4	100	86.623	ENSCSAG00000000211	LIG4	100	86.623	Chlorocebus_sabaeus
ENSCGRG00001012072	Lig4	99	76.380	ENSCPBG00000023291	LIG4	99	76.232	Chrysemys_picta_bellii
ENSCGRG00001012072	Lig4	68	46.117	ENSCING00000009536	-	96	46.117	Ciona_intestinalis
ENSCGRG00001012072	Lig4	83	45.729	ENSCSAVG00000010336	-	98	45.729	Ciona_savignyi
ENSCGRG00001012072	Lig4	100	86.732	ENSCANG00000005805	LIG4	100	86.732	Colobus_angolensis_palliatus
ENSCGRG00001012072	Lig4	100	100.000	ENSCGRG00000013417	Lig4	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001012072	Lig4	97	64.752	ENSCSEG00000013905	lig4	96	64.752	Cynoglossus_semilaevis
ENSCGRG00001012072	Lig4	99	65.376	ENSCVAG00000007896	lig4	99	65.376	Cyprinodon_variegatus
ENSCGRG00001012072	Lig4	99	63.787	ENSDARG00000060620	lig4	98	63.787	Danio_rerio
ENSCGRG00001012072	Lig4	100	85.104	ENSDNOG00000000513	LIG4	100	85.104	Dasypus_novemcinctus
ENSCGRG00001012072	Lig4	100	86.623	ENSDORG00000027303	Lig4	100	86.623	Dipodomys_ordii
ENSCGRG00001012072	Lig4	91	30.971	FBgn0030506	Lig4	92	30.971	Drosophila_melanogaster
ENSCGRG00001012072	Lig4	99	80.399	ENSETEG00000015563	LIG4	100	80.509	Echinops_telfairi
ENSCGRG00001012072	Lig4	99	43.913	ENSEBUG00000014243	lig4	99	43.913	Eptatretus_burgeri
ENSCGRG00001012072	Lig4	100	86.732	ENSEASG00005022073	LIG4	100	86.732	Equus_asinus_asinus
ENSCGRG00001012072	Lig4	100	86.404	ENSECAG00000003257	LIG4	100	86.404	Equus_caballus
ENSCGRG00001012072	Lig4	99	65.969	ENSELUG00000006787	lig4	99	65.969	Esox_lucius
ENSCGRG00001012072	Lig4	100	85.636	ENSFCAG00000031985	LIG4	100	85.636	Felis_catus
ENSCGRG00001012072	Lig4	89	74.201	ENSFALG00000004214	LIG4	98	74.201	Ficedula_albicollis
ENSCGRG00001012072	Lig4	100	85.965	ENSFDAG00000008973	LIG4	100	85.965	Fukomys_damarensis
ENSCGRG00001012072	Lig4	99	65.155	ENSFHEG00000007398	lig4	89	65.155	Fundulus_heteroclitus
ENSCGRG00001012072	Lig4	85	63.928	ENSGMOG00000012843	lig4	99	63.928	Gadus_morhua
ENSCGRG00001012072	Lig4	100	72.737	ENSGALG00000016854	LIG4	100	72.737	Gallus_gallus
ENSCGRG00001012072	Lig4	99	64.739	ENSGAFG00000019779	lig4	95	64.784	Gambusia_affinis
ENSCGRG00001012072	Lig4	99	62.942	ENSGACG00000014135	lig4	99	63.053	Gasterosteus_aculeatus
ENSCGRG00001012072	Lig4	100	86.842	ENSGGOG00000027771	LIG4	100	86.842	Gorilla_gorilla
ENSCGRG00001012072	Lig4	99	64.622	ENSHBUG00000006245	lig4	99	64.945	Haplochromis_burtoni
ENSCGRG00001012072	Lig4	100	85.855	ENSHGLG00000000718	LIG4	100	85.855	Heterocephalus_glaber_female
ENSCGRG00001012072	Lig4	100	85.855	ENSHGLG00100003265	LIG4	100	85.855	Heterocephalus_glaber_male
ENSCGRG00001012072	Lig4	99	64.215	ENSHCOG00000012010	lig4	99	64.215	Hippocampus_comes
ENSCGRG00001012072	Lig4	99	65.116	ENSIPUG00000013748	lig4	98	65.116	Ictalurus_punctatus
ENSCGRG00001012072	Lig4	100	87.061	ENSSTOG00000024303	LIG4	100	87.061	Ictidomys_tridecemlineatus
ENSCGRG00001012072	Lig4	100	88.158	ENSJJAG00000006750	Lig4	100	88.158	Jaculus_jaculus
ENSCGRG00001012072	Lig4	99	64.602	ENSKMAG00000001149	lig4	99	64.602	Kryptolebias_marmoratus
ENSCGRG00001012072	Lig4	91	65.223	ENSLBEG00000014578	lig4	99	65.223	Labrus_bergylta
ENSCGRG00001012072	Lig4	99	71.271	ENSLACG00000003282	LIG4	99	71.271	Latimeria_chalumnae
ENSCGRG00001012072	Lig4	99	70.099	ENSLOCG00000008901	lig4	98	70.099	Lepisosteus_oculatus
ENSCGRG00001012072	Lig4	100	82.932	ENSLAFG00000031152	LIG4	100	82.932	Loxodonta_africana
ENSCGRG00001012072	Lig4	100	86.623	ENSMFAG00000037235	LIG4	100	86.623	Macaca_fascicularis
ENSCGRG00001012072	Lig4	100	86.623	ENSMMUG00000008874	LIG4	100	86.623	Macaca_mulatta
ENSCGRG00001012072	Lig4	100	86.623	ENSMNEG00000023575	LIG4	100	86.623	Macaca_nemestrina
ENSCGRG00001012072	Lig4	100	86.623	ENSMLEG00000026720	LIG4	100	86.623	Mandrillus_leucophaeus
ENSCGRG00001012072	Lig4	99	65.313	ENSMAMG00000008472	lig4	99	65.313	Mastacembelus_armatus
ENSCGRG00001012072	Lig4	99	64.841	ENSMZEG00005001855	lig4	99	65.165	Maylandia_zebra
ENSCGRG00001012072	Lig4	100	73.391	ENSMGAG00000015532	LIG4	100	73.391	Meleagris_gallopavo
ENSCGRG00001012072	Lig4	100	91.776	ENSMOCG00000019000	Lig4	100	91.776	Microtus_ochrogaster
ENSCGRG00001012072	Lig4	99	63.938	ENSMMOG00000004390	lig4	99	63.938	Mola_mola
ENSCGRG00001012072	Lig4	100	80.482	ENSMODG00000025064	LIG4	100	80.832	Monodelphis_domestica
ENSCGRG00001012072	Lig4	99	64.934	ENSMALG00000008555	lig4	99	64.934	Monopterus_albus
ENSCGRG00001012072	Lig4	100	92.654	MGP_CAROLIEiJ_G0030809	Lig4	100	92.654	Mus_caroli
ENSCGRG00001012072	Lig4	100	92.325	ENSMUSG00000049717	Lig4	100	92.325	Mus_musculus
ENSCGRG00001012072	Lig4	100	92.654	MGP_PahariEiJ_G0021270	Lig4	100	92.654	Mus_pahari
ENSCGRG00001012072	Lig4	100	92.215	MGP_SPRETEiJ_G0031917	Lig4	100	92.215	Mus_spretus
ENSCGRG00001012072	Lig4	100	84.211	ENSMPUG00000018675	LIG4	100	84.211	Mustela_putorius_furo
ENSCGRG00001012072	Lig4	100	85.526	ENSMLUG00000001267	LIG4	100	85.526	Myotis_lucifugus
ENSCGRG00001012072	Lig4	100	89.364	ENSNGAG00000013258	Lig4	100	89.364	Nannospalax_galili
ENSCGRG00001012072	Lig4	99	65.060	ENSNBRG00000021252	lig4	99	65.385	Neolamprologus_brichardi
ENSCGRG00001012072	Lig4	100	86.513	ENSNLEG00000007888	LIG4	100	86.513	Nomascus_leucogenys
ENSCGRG00001012072	Lig4	100	85.746	ENSOPRG00000005765	LIG4	100	85.746	Ochotona_princeps
ENSCGRG00001012072	Lig4	100	85.307	ENSODEG00000019683	LIG4	100	85.307	Octodon_degus
ENSCGRG00001012072	Lig4	99	65.165	ENSONIG00000011969	lig4	98	65.165	Oreochromis_niloticus
ENSCGRG00001012072	Lig4	100	86.952	ENSOCUG00000015734	LIG4	100	86.952	Oryctolagus_cuniculus
ENSCGRG00001012072	Lig4	99	63.198	ENSORLG00000004041	lig4	99	63.308	Oryzias_latipes
ENSCGRG00001012072	Lig4	99	63.746	ENSORLG00020019607	lig4	99	63.855	Oryzias_latipes_hni
ENSCGRG00001012072	Lig4	99	63.308	ENSORLG00015017754	lig4	99	63.417	Oryzias_latipes_hsok
ENSCGRG00001012072	Lig4	74	68.491	ENSOMEG00000003459	lig4	98	68.491	Oryzias_melastigma
ENSCGRG00001012072	Lig4	100	85.652	ENSOGAG00000032120	LIG4	99	85.652	Otolemur_garnettii
ENSCGRG00001012072	Lig4	82	86.040	ENSOARG00000005590	LIG4	98	86.040	Ovis_aries
ENSCGRG00001012072	Lig4	100	86.732	ENSPPAG00000032998	LIG4	100	86.732	Pan_paniscus
ENSCGRG00001012072	Lig4	100	85.965	ENSPPRG00000017804	LIG4	100	85.965	Panthera_pardus
ENSCGRG00001012072	Lig4	100	85.965	ENSPTIG00000010051	LIG4	100	85.965	Panthera_tigris_altaica
ENSCGRG00001012072	Lig4	100	86.842	ENSPTRG00000006025	LIG4	100	86.842	Pan_troglodytes
ENSCGRG00001012072	Lig4	100	86.842	ENSPANG00000007562	LIG4	100	86.842	Papio_anubis
ENSCGRG00001012072	Lig4	99	65.461	ENSPKIG00000011645	lig4	98	65.461	Paramormyrops_kingsleyae
ENSCGRG00001012072	Lig4	99	76.425	ENSPSIG00000001504	LIG4	99	76.425	Pelodiscus_sinensis
ENSCGRG00001012072	Lig4	99	61.820	ENSPMGG00000013486	lig4	99	61.513	Periophthalmus_magnuspinnatus
ENSCGRG00001012072	Lig4	100	93.640	ENSPEMG00000000076	Lig4	100	93.640	Peromyscus_maniculatus_bairdii
ENSCGRG00001012072	Lig4	100	80.613	ENSPCIG00000021882	LIG4	100	80.613	Phascolarctos_cinereus
ENSCGRG00001012072	Lig4	99	64.556	ENSPFOG00000000797	lig4	99	64.215	Poecilia_formosa
ENSCGRG00001012072	Lig4	99	64.444	ENSPLAG00000001196	lig4	99	64.105	Poecilia_latipinna
ENSCGRG00001012072	Lig4	99	64.556	ENSPMEG00000021353	lig4	99	64.325	Poecilia_mexicana
ENSCGRG00001012072	Lig4	99	64.333	ENSPREG00000007323	lig4	99	63.886	Poecilia_reticulata
ENSCGRG00001012072	Lig4	100	86.952	ENSPPYG00000005540	LIG4	100	86.952	Pongo_abelii
ENSCGRG00001012072	Lig4	100	85.307	ENSPVAG00000016403	LIG4	100	85.307	Pteropus_vampyrus
ENSCGRG00001012072	Lig4	99	64.732	ENSPNYG00000009660	lig4	99	65.055	Pundamilia_nyererei
ENSCGRG00001012072	Lig4	100	64.513	ENSPNAG00000028056	lig4	100	64.513	Pygocentrus_nattereri
ENSCGRG00001012072	Lig4	100	64.513	ENSPNAG00000028069	LIG4	100	64.513	Pygocentrus_nattereri
ENSCGRG00001012072	Lig4	100	92.434	ENSRNOG00000014605	Lig4	100	92.434	Rattus_norvegicus
ENSCGRG00001012072	Lig4	100	85.417	ENSRBIG00000039962	LIG4	100	85.417	Rhinopithecus_bieti
ENSCGRG00001012072	Lig4	100	86.623	ENSRROG00000006040	LIG4	100	86.623	Rhinopithecus_roxellana
ENSCGRG00001012072	Lig4	100	85.746	ENSSBOG00000019029	LIG4	100	85.746	Saimiri_boliviensis_boliviensis
ENSCGRG00001012072	Lig4	100	78.313	ENSSHAG00000009525	LIG4	100	78.423	Sarcophilus_harrisii
ENSCGRG00001012072	Lig4	99	65.819	ENSSFOG00015012835	lig4	99	65.819	Scleropages_formosus
ENSCGRG00001012072	Lig4	99	62.721	ENSSMAG00000011267	lig4	99	62.721	Scophthalmus_maximus
ENSCGRG00001012072	Lig4	99	65.670	ENSSDUG00000010343	lig4	98	65.781	Seriola_dumerili
ENSCGRG00001012072	Lig4	99	63.938	ENSSLDG00000003239	lig4	99	63.938	Seriola_lalandi_dorsalis
ENSCGRG00001012072	Lig4	100	80.765	ENSSARG00000006573	LIG4	100	80.765	Sorex_araneus
ENSCGRG00001012072	Lig4	93	75.621	ENSSPUG00000002444	LIG4	100	75.621	Sphenodon_punctatus
ENSCGRG00001012072	Lig4	99	65.193	ENSSPAG00000001609	lig4	99	65.193	Stegastes_partitus
ENSCGRG00001012072	Lig4	99	84.615	ENSSSCG00000009540	LIG4	99	84.615	Sus_scrofa
ENSCGRG00001012072	Lig4	99	73.702	ENSTGUG00000010795	LIG4	99	73.702	Taeniopygia_guttata
ENSCGRG00001012072	Lig4	99	65.155	ENSTRUG00000009984	lig4	99	65.155	Takifugu_rubripes
ENSCGRG00001012072	Lig4	99	64.823	ENSTNIG00000010348	lig4	99	65.044	Tetraodon_nigroviridis
ENSCGRG00001012072	Lig4	100	87.061	ENSTBEG00000017741	LIG4	100	87.061	Tupaia_belangeri
ENSCGRG00001012072	Lig4	100	86.184	ENSTTRG00000012660	LIG4	100	86.184	Tursiops_truncatus
ENSCGRG00001012072	Lig4	100	83.991	ENSUAMG00000003773	LIG4	100	83.991	Ursus_americanus
ENSCGRG00001012072	Lig4	99	69.967	ENSXETG00000002654	lig4	99	69.967	Xenopus_tropicalis
ENSCGRG00001012072	Lig4	99	64.111	ENSXCOG00000017401	lig4	98	64.159	Xiphophorus_couchianus
ENSCGRG00001012072	Lig4	99	64.706	ENSXMAG00000015142	lig4	99	64.254	Xiphophorus_maculatus