EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012357 (Gene tree)
Gene ID: -
Gene Symbol: R3hdm1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 129150 bases
Position: chrscaffold_1:60236559-60365708
Accession: 2448514
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010471	R3H	PF01424.22	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001014692	-	3982	-	ENSCGRP00001010471	1173 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012357	R3hdm1	68	47.608	ENSCGRG00001012175	Arpp21	99	47.407
ENSCGRG00001012357	R3hdm1	85	57.561	ENSCGRG00001017324	R3hdm2	94	57.598

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012357	R3hdm1	97	88.791	ENSG00000048991	R3HDM1	93	98.649	Homo_sapiens
ENSCGRG00001012357	R3hdm1	87	48.799	ENSAPOG00000020850	r3hdm1	97	48.282	Acanthochromis_polyacanthus
ENSCGRG00001012357	R3hdm1	97	89.497	ENSAMEG00000014886	R3HDM1	99	89.497	Ailuropoda_melanoleuca
ENSCGRG00001012357	R3hdm1	86	48.121	ENSAOCG00000005192	r3hdm1	99	47.955	Amphiprion_ocellaris
ENSCGRG00001012357	R3hdm1	86	45.929	ENSAPEG00000016108	r3hdm1	99	45.775	Amphiprion_percula
ENSCGRG00001012357	R3hdm1	86	45.147	ENSATEG00000000232	r3hdm1	99	45.037	Anabas_testudineus
ENSCGRG00001012357	R3hdm1	97	75.880	ENSAPLG00000015231	R3HDM1	99	75.330	Anas_platyrhynchos
ENSCGRG00001012357	R3hdm1	97	77.456	ENSACAG00000001676	R3HDM1	99	77.807	Anolis_carolinensis
ENSCGRG00001012357	R3hdm1	97	88.967	ENSANAG00000035334	R3HDM1	99	88.967	Aotus_nancymaae
ENSCGRG00001012357	R3hdm1	77	47.390	ENSACLG00000027282	r3hdm1	94	47.280	Astatotilapia_calliptera
ENSCGRG00001012357	R3hdm1	59	39.858	ENSAMXG00000020587	arpp21	84	58.130	Astyanax_mexicanus
ENSCGRG00001012357	R3hdm1	90	62.413	ENSAMXG00000003536	r3hdm1	99	62.326	Astyanax_mexicanus
ENSCGRG00001012357	R3hdm1	90	70.983	ENSAMXG00000012861	R3HDM1	99	70.913	Astyanax_mexicanus
ENSCGRG00001012357	R3hdm1	97	91.093	ENSBTAG00000013302	R3HDM1	99	91.182	Bos_taurus
ENSCGRG00001012357	R3hdm1	97	88.614	ENSCJAG00000011718	R3HDM1	99	88.614	Callithrix_jacchus
ENSCGRG00001012357	R3hdm1	97	89.585	ENSCAFG00000005075	R3HDM1	99	89.585	Canis_familiaris
ENSCGRG00001012357	R3hdm1	97	92.321	ENSCAFG00020016119	R3HDM1	99	92.321	Canis_lupus_dingo
ENSCGRG00001012357	R3hdm1	97	91.093	ENSCHIG00000020851	R3HDM1	99	91.182	Capra_hircus
ENSCGRG00001012357	R3hdm1	97	90.476	ENSCPOG00000012784	R3HDM1	99	90.476	Cavia_porcellus
ENSCGRG00001012357	R3hdm1	97	88.526	ENSCCAG00000027199	R3HDM1	99	88.526	Cebus_capucinus
ENSCGRG00001012357	R3hdm1	97	91.005	ENSCATG00000023642	R3HDM1	99	90.917	Cercocebus_atys
ENSCGRG00001012357	R3hdm1	97	90.212	ENSCLAG00000007962	R3HDM1	100	89.369	Chinchilla_lanigera
ENSCGRG00001012357	R3hdm1	97	90.917	ENSCSAG00000016356	R3HDM1	99	90.829	Chlorocebus_sabaeus
ENSCGRG00001012357	R3hdm1	85	76.447	ENSCHOG00000013638	R3HDM1	90	76.316	Choloepus_hoffmanni
ENSCGRG00001012357	R3hdm1	89	76.644	ENSCPBG00000009645	R3HDM1	99	90.406	Chrysemys_picta_bellii
ENSCGRG00001012357	R3hdm1	97	88.350	ENSCANG00000034748	R3HDM1	99	88.350	Colobus_angolensis_palliatus
ENSCGRG00001012357	R3hdm1	100	99.915	ENSCGRG00000012080	R3hdm1	100	99.915	Cricetulus_griseus_crigri
ENSCGRG00001012357	R3hdm1	86	41.607	ENSCSEG00000008944	r3hdm1	99	42.752	Cynoglossus_semilaevis
ENSCGRG00001012357	R3hdm1	86	47.721	ENSCVAG00000007582	r3hdm1	99	47.015	Cyprinodon_variegatus
ENSCGRG00001012357	R3hdm1	63	36.821	ENSDARG00000061081	arpp21	71	40.722	Danio_rerio
ENSCGRG00001012357	R3hdm1	97	85.263	ENSDNOG00000000771	R3HDM1	99	85.263	Dasypus_novemcinctus
ENSCGRG00001012357	R3hdm1	97	77.778	ENSETEG00000013606	R3HDM1	99	77.690	Echinops_telfairi
ENSCGRG00001012357	R3hdm1	97	91.615	ENSEASG00005007392	R3HDM1	99	95.320	Equus_asinus_asinus
ENSCGRG00001012357	R3hdm1	97	91.703	ENSECAG00000019114	R3HDM1	99	95.320	Equus_caballus
ENSCGRG00001012357	R3hdm1	85	82.472	ENSEEUG00000012589	R3HDM1	88	83.591	Erinaceus_europaeus
ENSCGRG00001012357	R3hdm1	90	49.211	ENSELUG00000014413	r3hdm1	99	50.657	Esox_lucius
ENSCGRG00001012357	R3hdm1	87	57.525	ENSELUG00000004909	R3HDM1	99	52.851	Esox_lucius
ENSCGRG00001012357	R3hdm1	97	91.711	ENSFCAG00000027113	R3HDM1	99	95.813	Felis_catus
ENSCGRG00001012357	R3hdm1	90	69.058	ENSFALG00000013731	R3HDM1	93	69.507	Ficedula_albicollis
ENSCGRG00001012357	R3hdm1	97	90.564	ENSFDAG00000016478	R3HDM1	99	93.542	Fukomys_damarensis
ENSCGRG00001012357	R3hdm1	86	47.702	ENSFHEG00000018713	r3hdm1	99	46.967	Fundulus_heteroclitus
ENSCGRG00001012357	R3hdm1	57	67.609	ENSGMOG00000006042	-	74	67.174	Gadus_morhua
ENSCGRG00001012357	R3hdm1	97	56.594	ENSGALG00000012246	R3HDM1	99	85.246	Gallus_gallus
ENSCGRG00001012357	R3hdm1	86	44.631	ENSGAFG00000006203	r3hdm1	99	44.631	Gambusia_affinis
ENSCGRG00001012357	R3hdm1	85	48.250	ENSGACG00000014925	r3hdm1	99	48.424	Gasterosteus_aculeatus
ENSCGRG00001012357	R3hdm1	97	76.532	ENSGAGG00000007840	R3HDM1	96	82.793	Gopherus_agassizii
ENSCGRG00001012357	R3hdm1	97	88.703	ENSGGOG00000008156	R3HDM1	99	88.614	Gorilla_gorilla
ENSCGRG00001012357	R3hdm1	97	90.388	ENSHGLG00000015718	R3HDM1	99	93.358	Heterocephalus_glaber_female
ENSCGRG00001012357	R3hdm1	97	90.123	ENSHGLG00100003184	-	100	89.369	Heterocephalus_glaber_male
ENSCGRG00001012357	R3hdm1	97	66.019	ENSHGLG00100015374	-	99	66.196	Heterocephalus_glaber_male
ENSCGRG00001012357	R3hdm1	77	44.984	ENSHCOG00000013366	r3hdm1	88	60.500	Hippocampus_comes
ENSCGRG00001012357	R3hdm1	82	66.967	ENSIPUG00000013629	r3hdm1	94	68.536	Ictalurus_punctatus
ENSCGRG00001012357	R3hdm1	86	55.863	ENSIPUG00000001676	R3HDM1	99	65.311	Ictalurus_punctatus
ENSCGRG00001012357	R3hdm1	97	92.504	ENSSTOG00000007572	R3HDM1	99	94.465	Ictidomys_tridecemlineatus
ENSCGRG00001012357	R3hdm1	92	71.532	ENSLACG00000005334	R3HDM1	99	72.167	Latimeria_chalumnae
ENSCGRG00001012357	R3hdm1	97	66.149	ENSLOCG00000001641	r3hdm1	99	66.119	Lepisosteus_oculatus
ENSCGRG00001012357	R3hdm1	97	91.262	ENSLAFG00000009065	R3HDM1	99	91.262	Loxodonta_africana
ENSCGRG00001012357	R3hdm1	97	88.526	ENSMFAG00000030331	R3HDM1	99	95.813	Macaca_fascicularis
ENSCGRG00001012357	R3hdm1	97	88.438	ENSMMUG00000009844	R3HDM1	99	88.350	Macaca_mulatta
ENSCGRG00001012357	R3hdm1	97	88.438	ENSMNEG00000027793	R3HDM1	99	95.813	Macaca_nemestrina
ENSCGRG00001012357	R3hdm1	97	88.614	ENSMLEG00000043189	R3HDM1	99	88.614	Mandrillus_leucophaeus
ENSCGRG00001012357	R3hdm1	86	48.026	ENSMAMG00000004532	r3hdm1	99	48.004	Mastacembelus_armatus
ENSCGRG00001012357	R3hdm1	86	47.539	ENSMZEG00005003157	r3hdm1	99	47.349	Maylandia_zebra
ENSCGRG00001012357	R3hdm1	97	75.022	ENSMGAG00000012461	R3HDM1	99	74.016	Meleagris_gallopavo
ENSCGRG00001012357	R3hdm1	97	98.680	ENSMAUG00000010315	R3hdm1	99	98.680	Mesocricetus_auratus
ENSCGRG00001012357	R3hdm1	97	87.930	ENSMICG00000005900	-	99	87.930	Microcebus_murinus
ENSCGRG00001012357	R3hdm1	93	66.147	ENSMICG00000042655	-	100	84.729	Microcebus_murinus
ENSCGRG00001012357	R3hdm1	87	78.632	ENSMODG00000000923	R3HDM1	97	78.727	Monodelphis_domestica
ENSCGRG00001012357	R3hdm1	96	46.005	ENSMALG00000009000	r3hdm1	99	45.861	Monopterus_albus
ENSCGRG00001012357	R3hdm1	97	96.911	MGP_CAROLIEiJ_G0014543	R3hdm1	99	96.911	Mus_caroli
ENSCGRG00001012357	R3hdm1	97	96.823	ENSMUSG00000056211	R3hdm1	99	96.892	Mus_musculus
ENSCGRG00001012357	R3hdm1	97	96.823	MGP_PahariEiJ_G0027779	R3hdm1	99	96.823	Mus_pahari
ENSCGRG00001012357	R3hdm1	97	96.823	MGP_SPRETEiJ_G0015350	R3hdm1	99	96.823	Mus_spretus
ENSCGRG00001012357	R3hdm1	97	89.056	ENSMPUG00000002412	R3HDM1	99	89.144	Mustela_putorius_furo
ENSCGRG00001012357	R3hdm1	97	88.282	ENSMLUG00000013824	R3HDM1	99	88.282	Myotis_lucifugus
ENSCGRG00001012357	R3hdm1	97	88.614	ENSNLEG00000008622	R3HDM1	99	88.614	Nomascus_leucogenys
ENSCGRG00001012357	R3hdm1	87	68.830	ENSMEUG00000011784	R3HDM1	100	68.830	Notamacropus_eugenii
ENSCGRG00001012357	R3hdm1	97	89.585	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSCGRG00001012357	R3hdm1	91	46.309	ENSONIG00000012017	r3hdm1	98	46.140	Oreochromis_niloticus
ENSCGRG00001012357	R3hdm1	97	77.173	ENSOANG00000007987	R3HDM1	99	77.612	Ornithorhynchus_anatinus
ENSCGRG00001012357	R3hdm1	87	88.016	ENSOCUG00000017366	R3HDM1	98	88.016	Oryctolagus_cuniculus
ENSCGRG00001012357	R3hdm1	86	45.845	ENSORLG00000004297	r3hdm1	99	46.754	Oryzias_latipes
ENSCGRG00001012357	R3hdm1	86	45.682	ENSORLG00015017355	r3hdm1	99	46.604	Oryzias_latipes_hsok
ENSCGRG00001012357	R3hdm1	97	87.820	ENSOGAG00000003136	R3HDM1	99	88.614	Otolemur_garnettii
ENSCGRG00001012357	R3hdm1	97	88.173	ENSOARG00000010788	R3HDM1	99	88.173	Ovis_aries
ENSCGRG00001012357	R3hdm1	97	88.801	ENSPPAG00000027858	R3HDM1	99	88.801	Pan_paniscus
ENSCGRG00001012357	R3hdm1	97	89.056	ENSPPRG00000002626	R3HDM1	99	89.056	Panthera_pardus
ENSCGRG00001012357	R3hdm1	97	88.791	ENSPTIG00000016581	R3HDM1	99	88.791	Panthera_tigris_altaica
ENSCGRG00001012357	R3hdm1	97	88.801	ENSPTRG00000012494	R3HDM1	99	87.654	Pan_troglodytes
ENSCGRG00001012357	R3hdm1	97	88.526	ENSPANG00000026448	R3HDM1	99	88.526	Papio_anubis
ENSCGRG00001012357	R3hdm1	90	66.173	ENSPKIG00000004328	r3hdm1	91	74.921	Paramormyrops_kingsleyae
ENSCGRG00001012357	R3hdm1	97	74.715	ENSPSIG00000012915	R3HDM1	99	74.648	Pelodiscus_sinensis
ENSCGRG00001012357	R3hdm1	97	97.793	ENSPEMG00000015187	R3hdm1	99	97.793	Peromyscus_maniculatus_bairdii
ENSCGRG00001012357	R3hdm1	97	82.033	ENSPCIG00000002491	R3HDM1	99	88.725	Phascolarctos_cinereus
ENSCGRG00001012357	R3hdm1	86	47.549	ENSPFOG00000015036	r3hdm1	99	47.179	Poecilia_formosa
ENSCGRG00001012357	R3hdm1	86	44.413	ENSPLAG00000018042	r3hdm1	99	44.227	Poecilia_latipinna
ENSCGRG00001012357	R3hdm1	86	44.641	ENSPMEG00000023947	r3hdm1	99	44.455	Poecilia_mexicana
ENSCGRG00001012357	R3hdm1	86	47.967	ENSPREG00000007902	r3hdm1	88	61.520	Poecilia_reticulata
ENSCGRG00001012357	R3hdm1	97	87.213	ENSPPYG00000012815	R3HDM1	99	86.304	Pongo_abelii
ENSCGRG00001012357	R3hdm1	97	76.876	ENSPCAG00000006208	R3HDM1	99	76.876	Procavia_capensis
ENSCGRG00001012357	R3hdm1	97	86.520	ENSPCOG00000012698	R3HDM1	99	86.344	Propithecus_coquereli
ENSCGRG00001012357	R3hdm1	97	80.423	ENSPVAG00000006098	R3HDM1	99	78.390	Pteropus_vampyrus
ENSCGRG00001012357	R3hdm1	73	75.641	ENSPNAG00000005436	R3HDM1	99	75.563	Pygocentrus_nattereri
ENSCGRG00001012357	R3hdm1	90	63.084	ENSPNAG00000013952	r3hdm1	99	62.998	Pygocentrus_nattereri
ENSCGRG00001012357	R3hdm1	65	36.761	ENSPNAG00000004162	arpp21	57	57.600	Pygocentrus_nattereri
ENSCGRG00001012357	R3hdm1	97	96.117	ENSRNOG00000004099	R3hdm1	99	96.117	Rattus_norvegicus
ENSCGRG00001012357	R3hdm1	97	87.302	ENSRBIG00000033317	R3HDM1	99	97.417	Rhinopithecus_bieti
ENSCGRG00001012357	R3hdm1	97	88.526	ENSRROG00000034534	R3HDM1	99	87.908	Rhinopithecus_roxellana
ENSCGRG00001012357	R3hdm1	97	88.438	ENSSBOG00000020389	R3HDM1	99	88.438	Saimiri_boliviensis_boliviensis
ENSCGRG00001012357	R3hdm1	97	79.824	ENSSHAG00000016999	R3HDM1	99	79.912	Sarcophilus_harrisii
ENSCGRG00001012357	R3hdm1	90	69.734	ENSSFOG00015014134	r3hdm1	99	69.660	Scleropages_formosus
ENSCGRG00001012357	R3hdm1	97	54.419	ENSSFOG00015019851	-	99	56.256	Scleropages_formosus
ENSCGRG00001012357	R3hdm1	96	43.417	ENSSMAG00000001669	r3hdm1	99	42.751	Scophthalmus_maximus
ENSCGRG00001012357	R3hdm1	86	45.664	ENSSDUG00000010749	r3hdm1	99	45.841	Seriola_dumerili
ENSCGRG00001012357	R3hdm1	96	45.585	ENSSLDG00000004499	r3hdm1	99	45.409	Seriola_lalandi_dorsalis
ENSCGRG00001012357	R3hdm1	65	82.060	ENSSARG00000000352	-	69	82.060	Sorex_araneus
ENSCGRG00001012357	R3hdm1	97	77.045	ENSSPUG00000004167	R3HDM1	99	77.045	Sphenodon_punctatus
ENSCGRG00001012357	R3hdm1	86	47.359	ENSSPAG00000004648	r3hdm1	99	47.605	Stegastes_partitus
ENSCGRG00001012357	R3hdm1	97	91.799	ENSSSCG00000015692	R3HDM1	99	91.887	Sus_scrofa
ENSCGRG00001012357	R3hdm1	97	70.526	ENSTGUG00000011750	R3HDM1	99	70.676	Taeniopygia_guttata
ENSCGRG00001012357	R3hdm1	77	46.619	ENSTRUG00000011654	r3hdm1	93	46.708	Takifugu_rubripes
ENSCGRG00001012357	R3hdm1	84	44.401	ENSTNIG00000010362	r3hdm1	95	44.807	Tetraodon_nigroviridis
ENSCGRG00001012357	R3hdm1	97	82.701	ENSTTRG00000003935	R3HDM1	99	82.789	Tursiops_truncatus
ENSCGRG00001012357	R3hdm1	69	88.642	ENSUAMG00000024806	R3HDM1	99	91.697	Ursus_americanus
ENSCGRG00001012357	R3hdm1	97	84.996	ENSUMAG00000005552	R3HDM1	99	85.714	Ursus_maritimus
ENSCGRG00001012357	R3hdm1	90	89.474	ENSVPAG00000007333	R3HDM1	93	89.474	Vicugna_pacos
ENSCGRG00001012357	R3hdm1	97	92.145	ENSVVUG00000006457	R3HDM1	99	92.145	Vulpes_vulpes
ENSCGRG00001012357	R3hdm1	87	64.202	ENSXETG00000019330	r3hdm1	100	64.113	Xenopus_tropicalis
ENSCGRG00001012357	R3hdm1	66	47.730	ENSXCOG00000017448	r3hdm1	94	47.853	Xiphophorus_couchianus
ENSCGRG00001012357	R3hdm1	86	47.364	ENSXMAG00000007885	r3hdm1	99	46.901	Xiphophorus_maculatus