EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012459 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 900 bases
Position: chrscaffold_5:71131618-71132517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010611	RRM_1	PF00076.22	3.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001014835	-	825	-	ENSCGRP00001010611	274 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012459	-	91	48.175	ENSCGRG00001022416	-	62	61.290
ENSCGRG00001012459	-	89	63.060	ENSCGRG00001008592	Hnrnpa3	83	73.759
ENSCGRG00001012459	-	63	62.437	ENSCGRG00001000392	-	71	55.495
ENSCGRG00001012459	-	100	53.795	ENSCGRG00001017212	-	87	51.282
ENSCGRG00001012459	-	52	71.006	ENSCGRG00001001752	-	57	70.238
ENSCGRG00001012459	-	60	65.608	ENSCGRG00001018034	-	68	69.849
ENSCGRG00001012459	-	74	53.070	ENSCGRG00001010070	-	55	65.132
ENSCGRG00001012459	-	100	75.229	ENSCGRG00001000079	-	52	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012459	-	68	53.555	ENSAPOG00000003641	hnrnpa3	73	61.333	Acanthochromis_polyacanthus
ENSCGRG00001012459	-	53	79.310	ENSAMEG00000004293	-	60	71.622	Ailuropoda_melanoleuca
ENSCGRG00001012459	-	89	72.340	ENSCANG00000017881	-	85	73.404	Colobus_angolensis_palliatus
ENSCGRG00001012459	-	74	53.070	ENSCGRG00000007592	-	54	65.132	Cricetulus_griseus_crigri
ENSCGRG00001012459	-	55	65.143	ENSCGRG00000003686	-	52	73.427	Cricetulus_griseus_crigri
ENSCGRG00001012459	-	64	56.219	ENSDARG00000059351	hnrnpa3	76	62.914	Danio_rerio
ENSCGRG00001012459	-	89	49.811	ENSETEG00000007747	-	54	61.438	Echinops_telfairi
ENSCGRG00001012459	-	94	70.588	ENSELUG00000023080	hnrnpa3	51	60.811	Esox_lucius
ENSCGRG00001012459	-	59	42.553	ENSFCAG00000040261	HNRNPA0	52	42.105	Felis_catus
ENSCGRG00001012459	-	50	58.385	ENSGACG00000004477	hnrnpa3	50	60.000	Gasterosteus_aculeatus
ENSCGRG00001012459	-	52	64.368	ENSLACG00000008189	hnrnpa3	51	67.550	Latimeria_chalumnae
ENSCGRG00001012459	-	63	60.406	ENSLOCG00000006986	hnrnpa3	70	58.333	Lepisosteus_oculatus
ENSCGRG00001012459	-	100	52.632	ENSMNEG00000038943	-	70	52.128	Macaca_nemestrina
ENSCGRG00001012459	-	52	59.524	ENSMALG00000009691	hnrnpa3	77	60.927	Monopterus_albus
ENSCGRG00001012459	-	62	40.000	ENSNGAG00000008883	Hnrnpa0	50	46.575	Nannospalax_galili
ENSCGRG00001012459	-	93	55.762	ENSODEG00000016578	-	58	75.497	Octodon_degus
ENSCGRG00001012459	-	60	34.599	ENSORLG00015016302	HNRNPA0	74	36.224	Oryzias_latipes_hsok
ENSCGRG00001012459	-	55	48.750	ENSPMGG00000000747	hnrnpa3	65	61.905	Periophthalmus_magnuspinnatus
ENSCGRG00001012459	-	69	42.723	ENSPEMG00000020274	Hnrnpa0	56	46.479	Peromyscus_maniculatus_bairdii
ENSCGRG00001012459	-	68	36.992	ENSPLAG00000015223	-	69	37.989	Poecilia_latipinna
ENSCGRG00001012459	-	91	52.727	ENSPREG00000005411	hnrnpa3	70	52.128	Poecilia_reticulata
ENSCGRG00001012459	-	89	62.500	ENSPPYG00000012967	-	63	74.797	Pongo_abelii
ENSCGRG00001012459	-	69	46.734	ENSPNYG00000008424	hnrnpa3	75	60.390	Pundamilia_nyererei
ENSCGRG00001012459	-	88	69.259	ENSSSCG00000001098	-	62	70.561	Sus_scrofa
ENSCGRG00001012459	-	67	35.366	ENSTRUG00000021494	-	77	35.417	Takifugu_rubripes
ENSCGRG00001012459	-	50	70.186	ENSXETG00000001806	hnrnpa3	53	72.185	Xenopus_tropicalis