EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 2013 bases
Position: chrscaffold_88:38367-40379
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	1	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	2	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	3	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	4	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	5	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	6	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	7	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	8	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	9	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	10	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	11	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	12	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	13	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	14	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	15	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	16	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	17	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	18	19
ENSCGRP00001010696	zf-C2H2	PF00096.26	1.7e-97	19	19
ENSCGRP00001010696	zf-met	PF12874.7	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001014921	-	2013	-	ENSCGRP00001010696	670 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012523	-	88	42.857	ENSCGRG00001015432	Gfi1	53	42.857
ENSCGRG00001012523	-	79	39.098	ENSCGRG00001011389	Snai3	69	39.098
ENSCGRG00001012523	-	98	54.071	ENSCGRG00001007163	-	90	54.071
ENSCGRG00001012523	-	97	49.051	ENSCGRG00001007115	-	89	49.051
ENSCGRG00001012523	-	96	49.716	ENSCGRG00001024630	-	90	47.445
ENSCGRG00001012523	-	99	47.253	ENSCGRG00001023858	Zfp560	83	47.253
ENSCGRG00001012523	-	99	56.906	ENSCGRG00001002297	-	98	55.517
ENSCGRG00001012523	-	97	49.311	ENSCGRG00001015424	-	78	49.311
ENSCGRG00001012523	-	98	50.000	ENSCGRG00001013939	Zfp454	68	50.000
ENSCGRG00001012523	-	98	48.792	ENSCGRG00001013367	Zfp61	68	48.792
ENSCGRG00001012523	-	89	54.762	ENSCGRG00001019143	-	85	54.762
ENSCGRG00001012523	-	90	37.500	ENSCGRG00001013674	Snai2	60	37.931
ENSCGRG00001012523	-	98	50.273	ENSCGRG00001021088	Zfp354a	74	50.273
ENSCGRG00001012523	-	79	30.824	ENSCGRG00001004071	Patz1	60	31.095
ENSCGRG00001012523	-	89	34.521	ENSCGRG00001009557	Zfp319	91	34.369
ENSCGRG00001012523	-	98	49.693	ENSCGRG00001012640	Zfp94	85	49.693
ENSCGRG00001012523	-	80	34.211	ENSCGRG00001008879	Maz	62	32.338
ENSCGRG00001012523	-	91	43.966	ENSCGRG00001001429	Zfp574	94	43.966
ENSCGRG00001012523	-	83	37.450	ENSCGRG00001013598	Zfp865	82	32.778
ENSCGRG00001012523	-	98	49.167	ENSCGRG00001010967	Zfp1	84	49.167
ENSCGRG00001012523	-	98	47.757	ENSCGRG00001017579	Zfp112	72	44.703
ENSCGRG00001012523	-	98	44.361	ENSCGRG00001002406	Zfp39	66	44.361
ENSCGRG00001012523	-	98	50.331	ENSCGRG00001024303	-	99	48.000
ENSCGRG00001012523	-	99	45.859	ENSCGRG00001011966	Zfp715	65	46.903
ENSCGRG00001012523	-	97	48.905	ENSCGRG00001013561	Zfp768	55	48.905
ENSCGRG00001012523	-	81	46.067	ENSCGRG00001000576	Zfp26	63	46.067
ENSCGRG00001012523	-	78	37.963	ENSCGRG00001007749	Snai1	75	37.963
ENSCGRG00001012523	-	90	33.936	ENSCGRG00001017330	Repin1	84	38.776
ENSCGRG00001012523	-	99	42.899	ENSCGRG00001019408	Zbtb17	67	38.420
ENSCGRG00001012523	-	98	47.552	ENSCGRG00001020646	Gm3854	73	47.552
ENSCGRG00001012523	-	99	64.255	ENSCGRG00001013602	-	96	64.255
ENSCGRG00001012523	-	97	46.029	ENSCGRG00001010752	2610008E11Rik	81	46.029
ENSCGRG00001012523	-	79	46.939	ENSCGRG00001019569	Sall4	54	37.500
ENSCGRG00001012523	-	80	42.446	ENSCGRG00001010581	Prdm5	74	39.404
ENSCGRG00001012523	-	98	44.551	ENSCGRG00001004047	-	66	43.505
ENSCGRG00001012523	-	98	42.683	ENSCGRG00001012398	Zfp236	78	39.241
ENSCGRG00001012523	-	98	49.333	ENSCGRG00001012803	-	76	49.333
ENSCGRG00001012523	-	80	43.103	ENSCGRG00001013279	Zfp784	80	33.333
ENSCGRG00001012523	-	98	43.269	ENSCGRG00001019468	Zfp628	67	43.750
ENSCGRG00001012523	-	82	41.284	ENSCGRG00001005125	Wt1	60	44.792
ENSCGRG00001012523	-	96	42.521	ENSCGRG00001001639	Zfp882	97	42.521

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012523	-	98	49.909	ENSG00000198482	ZNF808	97	49.442	Homo_sapiens
ENSCGRG00001012523	-	98	49.174	ENSAMEG00000014454	-	100	49.174	Ailuropoda_melanoleuca
ENSCGRG00001012523	-	96	46.897	ENSACIG00000015429	-	80	46.897	Amphilophus_citrinellus
ENSCGRG00001012523	-	98	46.168	ENSACAG00000013039	-	99	46.168	Anolis_carolinensis
ENSCGRG00001012523	-	98	41.887	ENSACAG00000025611	-	71	40.464	Anolis_carolinensis
ENSCGRG00001012523	-	90	48.997	ENSACAG00000029487	-	82	48.997	Anolis_carolinensis
ENSCGRG00001012523	-	99	44.821	ENSACLG00000017576	-	90	50.360	Astatotilapia_calliptera
ENSCGRG00001012523	-	98	47.913	ENSACLG00000019318	-	98	46.847	Astatotilapia_calliptera
ENSCGRG00001012523	-	99	48.882	ENSAMXG00000038280	-	91	48.882	Astyanax_mexicanus
ENSCGRG00001012523	-	81	56.497	ENSAMXG00000033500	-	95	56.497	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.773	ENSAMXG00000025965	-	96	52.773	Astyanax_mexicanus
ENSCGRG00001012523	-	90	52.326	ENSAMXG00000018161	-	98	52.326	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.732	ENSAMXG00000029828	-	97	52.732	Astyanax_mexicanus
ENSCGRG00001012523	-	98	53.477	ENSAMXG00000031900	-	94	53.477	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.093	ENSAMXG00000041861	-	90	52.093	Astyanax_mexicanus
ENSCGRG00001012523	-	98	46.467	ENSAMXG00000012604	-	98	46.467	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.604	ENSAMXG00000036762	-	96	52.604	Astyanax_mexicanus
ENSCGRG00001012523	-	88	49.873	ENSAMXG00000030530	-	97	49.877	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.941	ENSAMXG00000041721	-	82	52.941	Astyanax_mexicanus
ENSCGRG00001012523	-	98	56.031	ENSAMXG00000042938	-	90	56.031	Astyanax_mexicanus
ENSCGRG00001012523	-	98	47.140	ENSAMXG00000009563	-	97	47.140	Astyanax_mexicanus
ENSCGRG00001012523	-	96	50.000	ENSAMXG00000037717	-	99	50.000	Astyanax_mexicanus
ENSCGRG00001012523	-	98	52.078	ENSAMXG00000031496	-	87	52.078	Astyanax_mexicanus
ENSCGRG00001012523	-	97	48.860	ENSBTAG00000030470	-	100	48.860	Bos_taurus
ENSCGRG00001012523	-	90	54.202	ENSBTAG00000050322	-	73	54.202	Bos_taurus
ENSCGRG00001012523	-	98	49.129	ENSCHIG00000020931	-	77	49.129	Capra_hircus
ENSCGRG00001012523	-	98	46.566	ENSCATG00000036940	ZNF808	83	47.426	Cercocebus_atys
ENSCGRG00001012523	-	98	46.901	ENSCSAG00000001974	ZNF808	88	46.901	Chlorocebus_sabaeus
ENSCGRG00001012523	-	99	52.256	ENSCPBG00000003130	-	98	55.777	Chrysemys_picta_bellii
ENSCGRG00001012523	-	99	47.024	ENSCPBG00000017489	-	94	47.024	Chrysemys_picta_bellii
ENSCGRG00001012523	-	99	52.482	ENSCPBG00000015500	-	91	52.019	Chrysemys_picta_bellii
ENSCGRG00001012523	-	97	53.973	ENSCPBG00000003774	-	98	51.124	Chrysemys_picta_bellii
ENSCGRG00001012523	-	89	40.625	ENSCING00000024509	-	96	40.625	Ciona_intestinalis
ENSCGRG00001012523	-	99	46.283	ENSCSAVG00000000649	-	99	46.283	Ciona_savignyi
ENSCGRG00001012523	-	96	53.140	ENSCSAVG00000000642	-	100	53.140	Ciona_savignyi
ENSCGRG00001012523	-	98	46.485	ENSCSAVG00000009583	-	100	46.485	Ciona_savignyi
ENSCGRG00001012523	-	99	46.192	ENSCANG00000019002	ZNF808	80	46.192	Colobus_angolensis_palliatus
ENSCGRG00001012523	-	99	45.859	ENSCGRG00000013626	Zfp715	62	46.903	Cricetulus_griseus_crigri
ENSCGRG00001012523	-	96	41.412	ENSEBUG00000006129	-	79	41.412	Eptatretus_burgeri
ENSCGRG00001012523	-	99	46.212	ENSEBUG00000006987	-	98	46.212	Eptatretus_burgeri
ENSCGRG00001012523	-	98	48.409	ENSEBUG00000003455	-	77	48.409	Eptatretus_burgeri
ENSCGRG00001012523	-	98	45.946	ENSEBUG00000009909	-	85	45.946	Eptatretus_burgeri
ENSCGRG00001012523	-	98	38.376	ENSEBUG00000003078	-	70	38.376	Eptatretus_burgeri
ENSCGRG00001012523	-	95	48.544	ENSEBUG00000006249	-	90	48.544	Eptatretus_burgeri
ENSCGRG00001012523	-	96	43.954	ENSEBUG00000014597	-	90	43.954	Eptatretus_burgeri
ENSCGRG00001012523	-	92	46.269	ENSEBUG00000005012	-	61	46.269	Eptatretus_burgeri
ENSCGRG00001012523	-	92	50.187	ENSEBUG00000014648	-	78	50.187	Eptatretus_burgeri
ENSCGRG00001012523	-	99	37.574	ENSEBUG00000014542	-	71	37.574	Eptatretus_burgeri
ENSCGRG00001012523	-	92	45.455	ENSEBUG00000010472	-	82	45.455	Eptatretus_burgeri
ENSCGRG00001012523	-	98	48.007	ENSEBUG00000001972	-	69	48.007	Eptatretus_burgeri
ENSCGRG00001012523	-	97	51.309	ENSEBUG00000008903	-	78	51.309	Eptatretus_burgeri
ENSCGRG00001012523	-	83	47.016	ENSEBUG00000005703	-	85	47.016	Eptatretus_burgeri
ENSCGRG00001012523	-	81	43.919	ENSGAFG00000017066	-	66	43.243	Gambusia_affinis
ENSCGRG00001012523	-	98	52.027	ENSGAGG00000002828	-	69	51.667	Gopherus_agassizii
ENSCGRG00001012523	-	89	45.690	ENSGAGG00000017094	-	54	45.690	Gopherus_agassizii
ENSCGRG00001012523	-	98	52.015	ENSGAGG00000006323	-	96	49.630	Gopherus_agassizii
ENSCGRG00001012523	-	92	50.415	ENSGAGG00000001469	-	91	50.415	Gopherus_agassizii
ENSCGRG00001012523	-	98	52.871	ENSGAGG00000014389	-	96	53.586	Gopherus_agassizii
ENSCGRG00001012523	-	98	46.932	ENSGGOG00000003352	ZNF808	80	46.932	Gorilla_gorilla
ENSCGRG00001012523	-	98	47.200	ENSHBUG00000001075	-	93	47.200	Haplochromis_burtoni
ENSCGRG00001012523	-	98	44.595	ENSLACG00000014708	-	81	45.749	Latimeria_chalumnae
ENSCGRG00001012523	-	98	46.566	ENSMFAG00000007422	ZNF808	84	47.243	Macaca_fascicularis
ENSCGRG00001012523	-	98	46.566	ENSMMUG00000012083	ZNF808	84	47.243	Macaca_mulatta
ENSCGRG00001012523	-	98	46.566	ENSMNEG00000043562	ZNF808	84	47.243	Macaca_nemestrina
ENSCGRG00001012523	-	98	48.068	ENSMLEG00000038043	ZNF808	74	47.590	Mandrillus_leucophaeus
ENSCGRG00001012523	-	97	50.150	ENSMZEG00005025012	-	99	48.951	Maylandia_zebra
ENSCGRG00001012523	-	98	46.341	ENSMZEG00005021865	-	97	49.091	Maylandia_zebra
ENSCGRG00001012523	-	98	52.247	ENSMICG00000042544	-	78	52.113	Microcebus_murinus
ENSCGRG00001012523	-	98	50.211	ENSMODG00000018622	-	98	50.211	Monodelphis_domestica
ENSCGRG00001012523	-	98	52.641	MGP_CAROLIEiJ_G0029490	Zfp420	98	52.641	Mus_caroli
ENSCGRG00001012523	-	100	68.670	MGP_CAROLIEiJ_G0021128	Zfp51	89	68.778	Mus_caroli
ENSCGRG00001012523	-	99	46.263	MGP_CAROLIEiJ_G0029614	Zfp715	86	54.762	Mus_caroli
ENSCGRG00001012523	-	99	43.750	MGP_CAROLIEiJ_G0029427	-	91	43.750	Mus_caroli
ENSCGRG00001012523	-	98	52.459	ENSMUSG00000058402	Zfp420	98	52.459	Mus_musculus
ENSCGRG00001012523	-	100	67.525	ENSMUSG00000023892	Zfp51	89	67.873	Mus_musculus
ENSCGRG00001012523	-	99	46.356	ENSMUSG00000012640	Zfp715	86	54.762	Mus_musculus
ENSCGRG00001012523	-	97	44.917	ENSMUSG00000070709	Zfp974	83	44.917	Mus_musculus
ENSCGRG00001012523	-	100	68.956	MGP_PahariEiJ_G0023447	Zfp51	89	68.929	Mus_pahari
ENSCGRG00001012523	-	98	51.175	MGP_PahariEiJ_G0012724	Zfp420	98	51.175	Mus_pahari
ENSCGRG00001012523	-	96	45.669	MGP_PahariEiJ_G0012663	-	81	45.669	Mus_pahari
ENSCGRG00001012523	-	99	46.356	MGP_SPRETEiJ_G0030713	Zfp715	82	54.762	Mus_spretus
ENSCGRG00001012523	-	98	52.459	MGP_SPRETEiJ_G0030586	Zfp420	98	52.459	Mus_spretus
ENSCGRG00001012523	-	98	45.430	MGP_SPRETEiJ_G0030525	-	88	45.430	Mus_spretus
ENSCGRG00001012523	-	99	45.138	MGP_SPRETEiJ_G0030526	-	90	44.487	Mus_spretus
ENSCGRG00001012523	-	99	45.387	ENSMLUG00000009276	-	93	45.387	Myotis_lucifugus
ENSCGRG00001012523	-	98	46.996	ENSMLUG00000015757	-	96	45.819	Myotis_lucifugus
ENSCGRG00001012523	-	98	49.442	ENSNLEG00000006042	ZNF808	80	47.291	Nomascus_leucogenys
ENSCGRG00001012523	-	99	44.529	ENSONIG00000016979	-	98	44.529	Oreochromis_niloticus
ENSCGRG00001012523	-	99	46.479	ENSONIG00000007396	-	99	46.479	Oreochromis_niloticus
ENSCGRG00001012523	-	97	50.000	ENSORLG00000011040	-	88	50.000	Oryzias_latipes
ENSCGRG00001012523	-	95	46.970	ENSOMEG00000001622	-	97	46.970	Oryzias_melastigma
ENSCGRG00001012523	-	83	40.510	ENSOMEG00000018871	-	69	40.510	Oryzias_melastigma
ENSCGRG00001012523	-	98	49.260	ENSOARG00000002896	-	90	46.733	Ovis_aries
ENSCGRG00001012523	-	98	49.257	ENSPPAG00000038086	ZNF808	87	49.257	Pan_paniscus
ENSCGRG00001012523	-	98	48.457	ENSPANG00000011361	ZNF808	84	48.457	Papio_anubis
ENSCGRG00001012523	-	98	48.635	ENSPSIG00000009603	-	99	48.635	Pelodiscus_sinensis
ENSCGRG00001012523	-	89	44.378	ENSPSIG00000008588	-	100	44.378	Pelodiscus_sinensis
ENSCGRG00001012523	-	100	82.388	ENSPEMG00000000548	-	93	82.388	Peromyscus_maniculatus_bairdii
ENSCGRG00001012523	-	98	49.153	ENSPCIG00000018929	-	93	49.153	Phascolarctos_cinereus
ENSCGRG00001012523	-	98	46.964	ENSPLAG00000014660	-	97	46.964	Poecilia_latipinna
ENSCGRG00001012523	-	81	46.465	ENSPREG00000008826	-	94	46.465	Poecilia_reticulata
ENSCGRG00001012523	-	98	49.257	ENSPPYG00000029644	ZNF808	80	49.257	Pongo_abelii
ENSCGRG00001012523	-	98	45.818	ENSPVAG00000009433	-	99	45.818	Pteropus_vampyrus
ENSCGRG00001012523	-	97	53.090	ENSPNAG00000005829	-	98	51.005	Pygocentrus_nattereri
ENSCGRG00001012523	-	86	49.219	ENSPNAG00000002244	-	85	49.219	Pygocentrus_nattereri
ENSCGRG00001012523	-	98	50.785	ENSPNAG00000006039	-	95	50.785	Pygocentrus_nattereri
ENSCGRG00001012523	-	98	49.225	ENSPNAG00000021831	-	96	49.225	Pygocentrus_nattereri
ENSCGRG00001012523	-	98	53.543	ENSPNAG00000012495	-	82	53.543	Pygocentrus_nattereri
ENSCGRG00001012523	-	98	50.395	ENSPNAG00000016478	-	98	52.092	Pygocentrus_nattereri
ENSCGRG00001012523	-	89	55.769	ENSPNAG00000012154	-	92	55.769	Pygocentrus_nattereri
ENSCGRG00001012523	-	99	73.913	ENSRNOG00000043341	Zfp51	92	73.913	Rattus_norvegicus
ENSCGRG00001012523	-	98	48.333	ENSRBIG00000032168	-	82	48.333	Rhinopithecus_bieti
ENSCGRG00001012523	-	98	46.192	ENSRROG00000009467	ZNF808	82	47.359	Rhinopithecus_roxellana
ENSCGRG00001012523	-	98	45.421	ENSSHAG00000003090	-	77	45.421	Sarcophilus_harrisii
ENSCGRG00001012523	-	83	37.190	ENSSLDG00000016301	-	93	39.419	Seriola_lalandi_dorsalis
ENSCGRG00001012523	-	98	50.865	ENSSPUG00000009898	-	99	49.296	Sphenodon_punctatus
ENSCGRG00001012523	-	89	50.373	ENSSPUG00000000229	-	94	50.373	Sphenodon_punctatus
ENSCGRG00001012523	-	96	50.353	ENSSPUG00000009764	-	64	47.436	Sphenodon_punctatus
ENSCGRG00001012523	-	100	46.289	ENSSPUG00000000136	-	99	47.047	Sphenodon_punctatus
ENSCGRG00001012523	-	98	48.899	ENSSPUG00000018867	-	89	48.899	Sphenodon_punctatus
ENSCGRG00001012523	-	98	48.117	ENSTGUG00000014079	-	100	48.117	Taeniopygia_guttata
ENSCGRG00001012523	-	97	36.181	ENSTNIG00000008100	-	100	36.181	Tetraodon_nigroviridis
ENSCGRG00001012523	-	89	42.821	ENSTNIG00000005023	-	99	42.430	Tetraodon_nigroviridis
ENSCGRG00001012523	-	98	44.758	ENSTBEG00000016262	-	100	44.758	Tupaia_belangeri
ENSCGRG00001012523	-	96	52.423	ENSUMAG00000024602	-	96	48.354	Ursus_maritimus
ENSCGRG00001012523	-	99	53.548	ENSXETG00000016781	-	100	53.548	Xenopus_tropicalis