EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012691 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 26430 bases
Position: chrscaffold_21:12932718-12959147
Accession: 100752891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010933	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSCGRP00001010923	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015151	-	618	-	ENSCGRP00001010923	205 (aa)	XP_003498151	UPI0000001259
ENSCGRT00001015161	-	615	-	ENSCGRP00001010933	204 (aa)	-	-
ENSCGRT00001015156	-	381	-	ENSCGRP00001010928	126 (aa)	-	UPI0000208584
ENSCGRT00001015154	-	417	-	ENSCGRP00001010926	138 (aa)	-	UPI00004704BB

Gene Model

Click here to download ENSCGRG00001012691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012691	-	82	31.361	ENSCGRG00001001303	-	71	31.361
ENSCGRG00001012691	-	84	35.028	ENSCGRG00001018735	Hras	93	35.028
ENSCGRG00001012691	-	95	38.384	ENSCGRG00001018153	Rab6a	94	38.384
ENSCGRG00001012691	-	77	40.373	ENSCGRG00001000893	Rab34	62	40.373
ENSCGRG00001012691	-	95	43.367	ENSCGRG00001000428	Rab5b	90	43.367
ENSCGRG00001012691	-	86	43.820	ENSCGRG00001022502	Rab39b	84	43.820
ENSCGRG00001012691	-	71	30.822	ENSCGRG00001020323	Arl3	75	30.822
ENSCGRG00001012691	-	95	45.361	ENSCGRG00001017519	Rab18	93	45.361
ENSCGRG00001012691	-	96	34.804	ENSCGRG00001010235	Rab9	97	34.804
ENSCGRG00001012691	-	80	50.909	ENSCGRG00001006853	Rab15	78	50.909
ENSCGRG00001012691	-	80	47.619	ENSCGRG00001001211	Rab33a	71	47.619
ENSCGRG00001012691	-	90	48.108	ENSCGRG00001020076	Rab2a	99	45.238
ENSCGRG00001012691	-	77	37.654	ENSCGRG00001021894	Rabl2	69	37.654
ENSCGRG00001012691	-	80	37.805	ENSCGRG00001006529	-	95	35.912
ENSCGRG00001012691	-	83	42.857	ENSCGRG00001019426	Rab42	81	42.857
ENSCGRG00001012691	-	97	45.960	ENSCGRG00001020833	-	99	45.960
ENSCGRG00001012691	-	85	52.299	ENSCGRG00001023313	Rab11a	81	52.299
ENSCGRG00001012691	-	95	36.410	ENSCGRG00001013041	Rab6b	94	36.410
ENSCGRG00001012691	-	69	30.872	ENSCGRG00001011460	Arl4d	73	30.872
ENSCGRG00001012691	-	95	43.590	ENSCGRG00001014226	Rab5c	89	43.590
ENSCGRG00001012691	-	79	38.788	ENSCGRG00001001220	Rab9b	82	38.788
ENSCGRG00001012691	-	79	30.435	ENSCGRG00001009212	-	73	30.435
ENSCGRG00001012691	-	85	32.000	ENSCGRG00001021366	Rheb	95	32.000
ENSCGRG00001012691	-	83	49.708	ENSCGRG00001006958	Rab12	58	49.708
ENSCGRG00001012691	-	83	36.207	ENSCGRG00001019182	Mras	83	36.207
ENSCGRG00001012691	-	81	38.235	ENSCGRG00001021807	Rab7	85	39.024
ENSCGRG00001012691	-	96	51.777	ENSCGRG00001021505	Rab13	97	51.777
ENSCGRG00001012691	-	82	45.833	ENSCGRG00001017341	Rab25	79	45.833
ENSCGRG00001012691	-	94	40.404	ENSCGRG00001016897	Rab33b	86	40.404
ENSCGRG00001012691	-	100	45.581	ENSCGRG00001013827	Rab11b	99	45.581
ENSCGRG00001012691	-	80	38.415	ENSCGRG00001020093	Nras	86	38.415
ENSCGRG00001012691	-	81	30.168	ENSCGRG00001014752	Rasl11a	74	30.168
ENSCGRG00001012691	-	99	55.446	ENSCGRG00001023636	Rab35	100	55.446
ENSCGRG00001012691	-	95	43.814	ENSCGRG00001020018	-	90	43.814
ENSCGRG00001012691	-	57	33.058	ENSCGRG00001006206	Arl2	61	33.058
ENSCGRG00001012691	-	96	33.175	ENSCGRG00001015715	Rab36	79	33.175
ENSCGRG00001012691	-	81	50.602	ENSCGRG00001021787	Rab30	82	50.602
ENSCGRG00001012691	-	56	31.356	ENSCGRG00001008210	Arl14	59	31.356
ENSCGRG00001012691	-	80	35.976	ENSCGRG00001013183	-	86	35.976
ENSCGRG00001012691	-	99	92.079	ENSCGRG00001014956	Rab1b	100	92.079
ENSCGRG00001012691	-	99	44.554	ENSCGRG00001006440	Rab14	93	44.554
ENSCGRG00001012691	-	57	32.203	ENSCGRG00001018115	Arl8b	61	32.203
ENSCGRG00001012691	-	57	31.092	ENSCGRG00001010866	Arl4c	61	31.092
ENSCGRG00001012691	-	62	31.538	ENSCGRG00001004637	Arl4a	65	31.538
ENSCGRG00001012691	-	81	34.940	ENSCGRG00001008994	Rab23	70	34.940
ENSCGRG00001012691	-	95	39.086	ENSCGRG00001020667	Rab22a	97	39.086
ENSCGRG00001012691	-	58	34.454	ENSCGRG00001020777	Arl8a	62	34.454

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012691	-	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSCGRG00001012691	-	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSCGRG00001012691	-	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSCGRG00001012691	-	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSCGRG00001012691	-	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSCGRG00001012691	-	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSCGRG00001012691	-	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSCGRG00001012691	-	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSCGRG00001012691	-	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSCGRG00001012691	-	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSCGRG00001012691	-	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSCGRG00001012691	-	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSCGRG00001012691	-	97	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSCGRG00001012691	-	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSCGRG00001012691	-	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSCGRG00001012691	-	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSCGRG00001012691	-	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSCGRG00001012691	-	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSCGRG00001012691	-	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSCGRG00001012691	-	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSCGRG00001012691	-	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001012691	-	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSCGRG00001012691	-	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSCGRG00001012691	-	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSCGRG00001012691	-	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSCGRG00001012691	-	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSCGRG00001012691	-	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSCGRG00001012691	-	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSCGRG00001012691	-	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSCGRG00001012691	-	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSCGRG00001012691	-	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSCGRG00001012691	-	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSCGRG00001012691	-	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSCGRG00001012691	-	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSCGRG00001012691	-	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSCGRG00001012691	-	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSCGRG00001012691	-	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSCGRG00001012691	-	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSCGRG00001012691	-	99	99.502	ENSHGLG00100007994	RAB1A	99	99.502	Heterocephalus_glaber_male
ENSCGRG00001012691	-	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSCGRG00001012691	-	97	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSCGRG00001012691	-	98	95.000	ENSKMAG00000014038	-	94	95.000	Kryptolebias_marmoratus
ENSCGRG00001012691	-	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSCGRG00001012691	-	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSCGRG00001012691	-	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSCGRG00001012691	-	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSCGRG00001012691	-	97	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSCGRG00001012691	-	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSCGRG00001012691	-	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSCGRG00001012691	-	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSCGRG00001012691	-	98	98.500	ENSMGAG00000004611	RAB1A	99	98.500	Meleagris_gallopavo
ENSCGRG00001012691	-	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSCGRG00001012691	-	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSCGRG00001012691	-	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSCGRG00001012691	-	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSCGRG00001012691	-	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSCGRG00001012691	-	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSCGRG00001012691	-	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSCGRG00001012691	-	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSCGRG00001012691	-	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSCGRG00001012691	-	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSCGRG00001012691	-	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSCGRG00001012691	-	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSCGRG00001012691	-	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSCGRG00001012691	-	97	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSCGRG00001012691	-	99	97.030	ENSODEG00000011248	-	100	97.030	Octodon_degus
ENSCGRG00001012691	-	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSCGRG00001012691	-	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSCGRG00001012691	-	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSCGRG00001012691	-	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSCGRG00001012691	-	97	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSCGRG00001012691	-	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSCGRG00001012691	-	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSCGRG00001012691	-	99	97.537	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSCGRG00001012691	-	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSCGRG00001012691	-	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSCGRG00001012691	-	100	96.569	ENSPSIG00000008028	RAB1A	99	96.569	Pelodiscus_sinensis
ENSCGRG00001012691	-	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSCGRG00001012691	-	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001012691	-	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSCGRG00001012691	-	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSCGRG00001012691	-	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSCGRG00001012691	-	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSCGRG00001012691	-	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSCGRG00001012691	-	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSCGRG00001012691	-	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSCGRG00001012691	-	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSCGRG00001012691	-	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSCGRG00001012691	-	97	99.492	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSCGRG00001012691	-	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSCGRG00001012691	-	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSCGRG00001012691	-	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSCGRG00001012691	-	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSCGRG00001012691	-	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSCGRG00001012691	-	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSCGRG00001012691	-	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSCGRG00001012691	-	99	98.507	ENSUMAG00000021038	RAB1A	100	99.000	Ursus_maritimus
ENSCGRG00001012691	-	97	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSCGRG00001012691	-	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSCGRG00001012691	-	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus