EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012694 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 20009 bases
Position: chrscaffold_17:22303948-22323956
Accession: 100752233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010910	MRP-S32	PF10210.9	6.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015138	-	1018	-	ENSCGRP00001010910	144 (aa)	XP_003506407	UPI00022F5290

Gene Model

Click here to download ENSCGRG00001012694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012694	-	98	75.177	ENSCGRG00001003813	-	100	75.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012694	-	99	77.465	ENSG00000198015	MRPL42	100	77.465	Homo_sapiens
ENSCGRG00001012694	-	78	74.336	ENSAMEG00000009832	MRPL42	89	74.336	Ailuropoda_melanoleuca
ENSCGRG00001012694	-	67	63.542	ENSACIG00000017826	mrpl42	69	63.542	Amphilophus_citrinellus
ENSCGRG00001012694	-	99	60.140	ENSAPLG00000015057	MRPL42	100	60.140	Anas_platyrhynchos
ENSCGRG00001012694	-	99	55.634	ENSANAG00000036083	-	100	55.634	Aotus_nancymaae
ENSCGRG00001012694	-	99	74.648	ENSANAG00000036935	-	100	74.648	Aotus_nancymaae
ENSCGRG00001012694	-	89	73.438	ENSANAG00000000692	-	91	73.438	Aotus_nancymaae
ENSCGRG00001012694	-	87	71.200	ENSANAG00000033101	-	83	71.200	Aotus_nancymaae
ENSCGRG00001012694	-	74	71.698	ENSBTAG00000052971	-	97	71.698	Bos_taurus
ENSCGRG00001012694	-	99	76.761	ENSBTAG00000002708	MRPL42	100	76.761	Bos_taurus
ENSCGRG00001012694	-	99	76.761	ENSCJAG00000046971	MRPL42	100	76.761	Callithrix_jacchus
ENSCGRG00001012694	-	67	82.474	ENSCAFG00020022967	-	85	82.474	Canis_lupus_dingo
ENSCGRG00001012694	-	87	78.400	ENSCHIG00000014921	MRPL42	98	78.400	Capra_hircus
ENSCGRG00001012694	-	76	77.064	ENSTSYG00000032810	-	100	77.064	Carlito_syrichta
ENSCGRG00001012694	-	99	78.873	ENSTSYG00000006370	-	100	78.873	Carlito_syrichta
ENSCGRG00001012694	-	91	70.992	ENSTSYG00000036466	-	90	70.992	Carlito_syrichta
ENSCGRG00001012694	-	100	62.500	ENSCAPG00000015105	-	100	62.500	Cavia_aperea
ENSCGRG00001012694	-	83	81.513	ENSCAPG00000016985	-	89	81.513	Cavia_aperea
ENSCGRG00001012694	-	100	76.389	ENSCPOG00000030015	-	100	76.389	Cavia_porcellus
ENSCGRG00001012694	-	100	62.500	ENSCPOG00000008943	-	100	62.500	Cavia_porcellus
ENSCGRG00001012694	-	88	72.441	ENSCCAG00000032203	-	77	72.441	Cebus_capucinus
ENSCGRG00001012694	-	99	76.056	ENSCCAG00000031179	-	100	76.056	Cebus_capucinus
ENSCGRG00001012694	-	87	60.800	ENSCCAG00000029290	-	80	60.800	Cebus_capucinus
ENSCGRG00001012694	-	99	77.465	ENSCATG00000037616	MRPL42	100	77.465	Cercocebus_atys
ENSCGRG00001012694	-	99	76.056	ENSCLAG00000005421	MRPL42	100	76.056	Chinchilla_lanigera
ENSCGRG00001012694	-	99	77.465	ENSCSAG00000003706	MRPL42	100	77.465	Chlorocebus_sabaeus
ENSCGRG00001012694	-	82	47.458	ENSCHOG00000007010	-	100	47.458	Choloepus_hoffmanni
ENSCGRG00001012694	-	98	62.585	ENSCPBG00000001581	MRPL42	100	62.585	Chrysemys_picta_bellii
ENSCGRG00001012694	-	99	80.282	ENSCANG00000033457	MRPL42	100	80.282	Colobus_angolensis_palliatus
ENSCGRG00001012694	-	98	100.000	ENSCGRG00000003801	Mrpl42	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001012694	-	99	71.127	ENSDNOG00000049701	-	100	71.127	Dasypus_novemcinctus
ENSCGRG00001012694	-	99	73.944	ENSDNOG00000032710	-	100	73.944	Dasypus_novemcinctus
ENSCGRG00001012694	-	98	82.979	ENSDORG00000015571	Mrpl42	100	82.979	Dipodomys_ordii
ENSCGRG00001012694	-	85	54.032	ENSETEG00000014745	-	92	54.032	Echinops_telfairi
ENSCGRG00001012694	-	99	80.282	ENSEASG00005019361	MRPL42	100	80.282	Equus_asinus_asinus
ENSCGRG00001012694	-	99	78.873	ENSECAG00000026888	MRPL42	100	78.873	Equus_caballus
ENSCGRG00001012694	-	86	79.032	ENSFCAG00000040567	-	100	79.032	Felis_catus
ENSCGRG00001012694	-	99	79.577	ENSFCAG00000037907	-	100	79.577	Felis_catus
ENSCGRG00001012694	-	89	60.156	ENSFCAG00000036356	-	80	60.156	Felis_catus
ENSCGRG00001012694	-	93	64.138	ENSFALG00000010717	MRPL42	99	64.138	Ficedula_albicollis
ENSCGRG00001012694	-	98	80.851	ENSFDAG00000018129	MRPL42	100	80.851	Fukomys_damarensis
ENSCGRG00001012694	-	93	58.621	ENSGALG00000011293	MRPL42	99	58.621	Gallus_gallus
ENSCGRG00001012694	-	98	63.265	ENSGAGG00000010125	MRPL42	100	63.265	Gopherus_agassizii
ENSCGRG00001012694	-	99	77.465	ENSGGOG00000022760	MRPL42	100	77.465	Gorilla_gorilla
ENSCGRG00001012694	-	87	77.600	ENSHGLG00000008248	-	100	77.600	Heterocephalus_glaber_female
ENSCGRG00001012694	-	85	81.967	ENSHGLG00000007399	-	92	80.800	Heterocephalus_glaber_female
ENSCGRG00001012694	-	85	77.236	ENSHGLG00100013257	-	98	77.236	Heterocephalus_glaber_male
ENSCGRG00001012694	-	87	80.800	ENSHGLG00100018317	-	88	80.800	Heterocephalus_glaber_male
ENSCGRG00001012694	-	98	78.873	ENSSTOG00000026544	MRPL42	100	78.873	Ictidomys_tridecemlineatus
ENSCGRG00001012694	-	85	66.667	ENSLACG00000006919	MRPL42	84	66.667	Latimeria_chalumnae
ENSCGRG00001012694	-	84	79.339	ENSLAFG00000013779	MRPL42	86	79.339	Loxodonta_africana
ENSCGRG00001012694	-	99	77.465	ENSMFAG00000032330	MRPL42	100	77.465	Macaca_fascicularis
ENSCGRG00001012694	-	99	75.352	ENSMMUG00000016805	MRPL42	100	75.352	Macaca_mulatta
ENSCGRG00001012694	-	99	77.465	ENSMNEG00000028853	MRPL42	100	77.465	Macaca_nemestrina
ENSCGRG00001012694	-	99	78.169	ENSMLEG00000038104	MRPL42	100	78.169	Mandrillus_leucophaeus
ENSCGRG00001012694	-	98	59.864	ENSMGAG00000011346	MRPL42	100	59.864	Meleagris_gallopavo
ENSCGRG00001012694	-	98	85.106	ENSMAUG00000010057	-	100	85.106	Mesocricetus_auratus
ENSCGRG00001012694	-	98	75.887	ENSMAUG00000018130	-	100	75.887	Mesocricetus_auratus
ENSCGRG00001012694	-	92	78.030	ENSMICG00000035189	-	92	78.030	Microcebus_murinus
ENSCGRG00001012694	-	67	79.167	ENSMICG00000045594	-	97	79.167	Microcebus_murinus
ENSCGRG00001012694	-	67	79.167	ENSMICG00000028094	-	89	79.167	Microcebus_murinus
ENSCGRG00001012694	-	86	80.000	ENSMICG00000036541	-	99	79.245	Microcebus_murinus
ENSCGRG00001012694	-	98	81.690	ENSMICG00000032596	-	100	81.690	Microcebus_murinus
ENSCGRG00001012694	-	98	85.816	ENSMOCG00000004616	-	100	85.816	Microtus_ochrogaster
ENSCGRG00001012694	-	98	90.071	ENSMOCG00000013541	-	100	90.071	Microtus_ochrogaster
ENSCGRG00001012694	-	98	86.620	MGP_CAROLIEiJ_G0015750	Mrpl42	100	86.620	Mus_caroli
ENSCGRG00001012694	-	98	86.620	ENSMUSG00000062981	Mrpl42	100	86.620	Mus_musculus
ENSCGRG00001012694	-	99	71.127	ENSMLUG00000023702	-	100	71.127	Myotis_lucifugus
ENSCGRG00001012694	-	97	75.714	ENSMLUG00000025058	-	99	75.714	Myotis_lucifugus
ENSCGRG00001012694	-	99	72.535	ENSMLUG00000029623	-	100	72.535	Myotis_lucifugus
ENSCGRG00001012694	-	89	81.250	ENSNGAG00000000717	Mrpl42	100	81.250	Nannospalax_galili
ENSCGRG00001012694	-	99	77.465	ENSNLEG00000005699	MRPL42	100	77.465	Nomascus_leucogenys
ENSCGRG00001012694	-	99	73.239	ENSOPRG00000010967	MRPL42	100	73.239	Ochotona_princeps
ENSCGRG00001012694	-	99	73.427	ENSODEG00000012689	-	100	74.126	Octodon_degus
ENSCGRG00001012694	-	97	65.957	ENSODEG00000016452	-	98	68.085	Octodon_degus
ENSCGRG00001012694	-	82	83.193	ENSODEG00000008681	-	100	83.193	Octodon_degus
ENSCGRG00001012694	-	99	73.944	ENSOCUG00000010928	MRPL42	100	73.944	Oryctolagus_cuniculus
ENSCGRG00001012694	-	99	74.648	ENSOGAG00000027617	-	100	74.648	Otolemur_garnettii
ENSCGRG00001012694	-	99	72.535	ENSOGAG00000024156	-	100	72.535	Otolemur_garnettii
ENSCGRG00001012694	-	99	75.352	ENSOGAG00000034004	-	100	75.352	Otolemur_garnettii
ENSCGRG00001012694	-	97	75.000	ENSOGAG00000030438	-	99	75.000	Otolemur_garnettii
ENSCGRG00001012694	-	99	79.577	ENSOGAG00000025600	-	100	79.577	Otolemur_garnettii
ENSCGRG00001012694	-	99	78.873	ENSOGAG00000025686	-	100	78.873	Otolemur_garnettii
ENSCGRG00001012694	-	99	71.127	ENSOGAG00000026395	-	100	71.127	Otolemur_garnettii
ENSCGRG00001012694	-	87	79.200	ENSOARG00000015849	MRPL42	98	79.200	Ovis_aries
ENSCGRG00001012694	-	99	78.873	ENSPPAG00000038254	MRPL42	100	78.873	Pan_paniscus
ENSCGRG00001012694	-	99	79.577	ENSPPRG00000013218	-	100	79.577	Panthera_pardus
ENSCGRG00001012694	-	99	78.873	ENSPPRG00000015755	-	100	78.873	Panthera_pardus
ENSCGRG00001012694	-	86	76.613	ENSPPRG00000017935	-	100	76.613	Panthera_pardus
ENSCGRG00001012694	-	88	58.268	ENSPPRG00000006533	-	79	58.268	Panthera_pardus
ENSCGRG00001012694	-	99	79.577	ENSPTIG00000009394	-	100	79.577	Panthera_tigris_altaica
ENSCGRG00001012694	-	99	79.577	ENSPTIG00000019099	-	100	79.577	Panthera_tigris_altaica
ENSCGRG00001012694	-	81	73.504	ENSPTIG00000009717	-	95	73.504	Panthera_tigris_altaica
ENSCGRG00001012694	-	99	78.873	ENSPTRG00000022791	MRPL42	100	78.873	Pan_troglodytes
ENSCGRG00001012694	-	99	69.388	ENSPANG00000030179	MRPL42	100	69.388	Papio_anubis
ENSCGRG00001012694	-	98	59.864	ENSPSIG00000010745	MRPL42	100	59.864	Pelodiscus_sinensis
ENSCGRG00001012694	-	98	87.234	ENSPEMG00000020562	-	100	87.402	Peromyscus_maniculatus_bairdii
ENSCGRG00001012694	-	99	61.972	ENSPCIG00000001472	-	74	61.972	Phascolarctos_cinereus
ENSCGRG00001012694	-	99	76.761	ENSPPYG00000004833	MRPL42	100	76.761	Pongo_abelii
ENSCGRG00001012694	-	82	79.661	ENSPCAG00000003791	MRPL42	100	79.661	Procavia_capensis
ENSCGRG00001012694	-	95	76.087	ENSPCOG00000014986	-	99	76.087	Propithecus_coquereli
ENSCGRG00001012694	-	99	67.606	ENSPCOG00000025008	-	100	67.606	Propithecus_coquereli
ENSCGRG00001012694	-	99	62.676	ENSPCOG00000018896	-	100	62.676	Propithecus_coquereli
ENSCGRG00001012694	-	57	62.195	ENSPVAG00000013736	-	69	62.195	Pteropus_vampyrus
ENSCGRG00001012694	-	98	83.688	ENSRNOG00000042740	Mrpl42	100	83.688	Rattus_norvegicus
ENSCGRG00001012694	-	99	77.622	ENSRNOG00000021867	AABR07009508.1	100	77.622	Rattus_norvegicus
ENSCGRG00001012694	-	99	79.577	ENSRBIG00000011046	-	100	79.577	Rhinopithecus_bieti
ENSCGRG00001012694	-	89	56.250	ENSRBIG00000044361	-	79	56.250	Rhinopithecus_bieti
ENSCGRG00001012694	-	99	78.873	ENSRROG00000033949	MRPL42	100	78.873	Rhinopithecus_roxellana
ENSCGRG00001012694	-	82	55.932	ENSSBOG00000025086	-	100	55.932	Saimiri_boliviensis_boliviensis
ENSCGRG00001012694	-	65	75.532	ENSSBOG00000027483	-	82	75.532	Saimiri_boliviensis_boliviensis
ENSCGRG00001012694	-	99	74.648	ENSSBOG00000009656	-	100	74.648	Saimiri_boliviensis_boliviensis
ENSCGRG00001012694	-	83	62.500	ENSSFOG00015006975	mrpl42	82	62.500	Scleropages_formosus
ENSCGRG00001012694	-	100	57.823	ENSSPUG00000015009	-	99	57.823	Sphenodon_punctatus
ENSCGRG00001012694	-	81	54.310	ENSSPAG00000013637	mrpl42	83	54.310	Stegastes_partitus
ENSCGRG00001012694	-	74	59.292	ENSSSCG00000035613	-	88	64.646	Sus_scrofa
ENSCGRG00001012694	-	96	57.246	ENSSSCG00000036897	-	97	57.246	Sus_scrofa
ENSCGRG00001012694	-	69	55.556	ENSSSCG00000034693	-	84	55.556	Sus_scrofa
ENSCGRG00001012694	-	99	77.465	ENSSSCG00000030478	-	100	77.465	Sus_scrofa
ENSCGRG00001012694	-	82	68.644	ENSTGUG00000008272	MRPL42	100	68.644	Taeniopygia_guttata
ENSCGRG00001012694	-	61	57.955	ENSTNIG00000018478	mrpl42	67	57.955	Tetraodon_nigroviridis
ENSCGRG00001012694	-	85	79.675	ENSTTRG00000003312	MRPL42	92	79.675	Tursiops_truncatus
ENSCGRG00001012694	-	99	79.577	ENSUAMG00000025405	-	100	79.577	Ursus_americanus
ENSCGRG00001012694	-	54	78.205	ENSUAMG00000019831	-	82	78.205	Ursus_americanus
ENSCGRG00001012694	-	85	71.545	ENSUMAG00000014643	-	77	71.545	Ursus_maritimus
ENSCGRG00001012694	-	99	79.577	ENSUMAG00000003107	-	100	79.577	Ursus_maritimus
ENSCGRG00001012694	-	82	80.508	ENSVPAG00000007658	MRPL42	100	80.508	Vicugna_pacos
ENSCGRG00001012694	-	51	83.784	ENSVVUG00000007253	-	95	83.784	Vulpes_vulpes
ENSCGRG00001012694	-	54	76.923	ENSVVUG00000002834	-	96	76.923	Vulpes_vulpes
ENSCGRG00001012694	-	99	77.465	ENSVVUG00000011842	-	100	77.465	Vulpes_vulpes
ENSCGRG00001012694	-	67	59.794	ENSXMAG00000004057	mrpl42	74	59.794	Xiphophorus_maculatus