EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012719 (Gene tree)
Gene ID: -
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 36108 bases
Position: chrscaffold_39:2547025-2583132
Accession: 1935129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001011005	ResIII	PF04851.15	8e-11	1	1
ENSCGRP00001011005	DEAD	PF00270.29	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015234	-	3168	-	ENSCGRP00001011005	1055 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012719	Smarca5	94	84.343	ENSCGRG00001010776	Smarca1	93	84.343
ENSCGRG00001012719	Smarca5	54	43.056	ENSCGRG00001021624	Chd1l	62	43.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012719	Smarca5	99	97.814	ENSG00000153147	SMARCA5	99	97.814	Homo_sapiens
ENSCGRG00001012719	Smarca5	99	98.004	ENSAMEG00000009585	SMARCA5	99	98.004	Ailuropoda_melanoleuca
ENSCGRG00001012719	Smarca5	91	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSCGRG00001012719	Smarca5	98	93.913	ENSACAG00000003038	SMARCA5	97	95.920	Anolis_carolinensis
ENSCGRG00001012719	Smarca5	99	97.719	ENSANAG00000019345	SMARCA5	99	99.096	Aotus_nancymaae
ENSCGRG00001012719	Smarca5	99	97.814	ENSBTAG00000003399	SMARCA5	99	97.814	Bos_taurus
ENSCGRG00001012719	Smarca5	99	97.814	ENSCJAG00000002735	SMARCA5	99	97.814	Callithrix_jacchus
ENSCGRG00001012719	Smarca5	99	97.909	ENSCAFG00000007525	SMARCA5	99	97.909	Canis_familiaris
ENSCGRG00001012719	Smarca5	98	97.868	ENSCAFG00020025641	SMARCA5	99	97.868	Canis_lupus_dingo
ENSCGRG00001012719	Smarca5	99	98.004	ENSCHIG00000013730	-	99	98.004	Capra_hircus
ENSCGRG00001012719	Smarca5	99	96.293	ENSCHIG00000016375	-	99	96.293	Capra_hircus
ENSCGRG00001012719	Smarca5	94	99.496	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSCGRG00001012719	Smarca5	92	99.483	ENSCAPG00000013747	SMARCA5	95	99.483	Cavia_aperea
ENSCGRG00001012719	Smarca5	99	98.004	ENSCPOG00000002259	SMARCA5	99	98.004	Cavia_porcellus
ENSCGRG00001012719	Smarca5	99	97.814	ENSCCAG00000027215	SMARCA5	99	99.197	Cebus_capucinus
ENSCGRG00001012719	Smarca5	99	97.909	ENSCATG00000044917	SMARCA5	99	97.909	Cercocebus_atys
ENSCGRG00001012719	Smarca5	94	99.799	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSCGRG00001012719	Smarca5	92	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSCGRG00001012719	Smarca5	90	98.519	ENSCHOG00000011724	SMARCA5	87	98.519	Choloepus_hoffmanni
ENSCGRG00001012719	Smarca5	94	98.295	ENSCPBG00000027535	SMARCA5	97	97.619	Chrysemys_picta_bellii
ENSCGRG00001012719	Smarca5	99	97.719	ENSCANG00000041629	SMARCA5	99	97.719	Colobus_angolensis_palliatus
ENSCGRG00001012719	Smarca5	95	99.599	ENSCGRG00000001417	Smarca5	99	99.899	Cricetulus_griseus_crigri
ENSCGRG00001012719	Smarca5	98	94.879	ENSDNOG00000009158	SMARCA5	95	96.315	Dasypus_novemcinctus
ENSCGRG00001012719	Smarca5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSCGRG00001012719	Smarca5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSCGRG00001012719	Smarca5	99	98.194	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSCGRG00001012719	Smarca5	99	98.194	ENSECAG00000002676	SMARCA5	99	98.194	Equus_caballus
ENSCGRG00001012719	Smarca5	94	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSCGRG00001012719	Smarca5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSCGRG00001012719	Smarca5	99	98.099	ENSFCAG00000004544	SMARCA5	99	98.099	Felis_catus
ENSCGRG00001012719	Smarca5	92	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSCGRG00001012719	Smarca5	95	99.400	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSCGRG00001012719	Smarca5	99	85.139	ENSGMOG00000007519	SMARCA5	97	87.550	Gadus_morhua
ENSCGRG00001012719	Smarca5	96	96.358	ENSGALG00000009913	SMARCA5	97	97.313	Gallus_gallus
ENSCGRG00001012719	Smarca5	92	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSCGRG00001012719	Smarca5	96	97.154	ENSGAGG00000019882	SMARCA5	97	97.815	Gopherus_agassizii
ENSCGRG00001012719	Smarca5	99	97.814	ENSGGOG00000012595	SMARCA5	99	99.396	Gorilla_gorilla
ENSCGRG00001012719	Smarca5	99	97.624	ENSHGLG00000000816	-	99	97.624	Heterocephalus_glaber_female
ENSCGRG00001012719	Smarca5	95	89.672	ENSHGLG00000000317	-	96	89.741	Heterocephalus_glaber_female
ENSCGRG00001012719	Smarca5	94	99.698	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSCGRG00001012719	Smarca5	99	98.481	ENSSTOG00000010683	SMARCA5	99	98.481	Ictidomys_tridecemlineatus
ENSCGRG00001012719	Smarca5	99	98.099	ENSJJAG00000014965	Smarca5	99	98.099	Jaculus_jaculus
ENSCGRG00001012719	Smarca5	94	95.459	ENSLACG00000007091	SMARCA5	97	95.459	Latimeria_chalumnae
ENSCGRG00001012719	Smarca5	93	92.183	ENSLOCG00000008966	SMARCA5	96	92.183	Lepisosteus_oculatus
ENSCGRG00001012719	Smarca5	99	97.719	ENSLAFG00000007795	SMARCA5	99	97.719	Loxodonta_africana
ENSCGRG00001012719	Smarca5	99	97.909	ENSMFAG00000043649	SMARCA5	99	97.909	Macaca_fascicularis
ENSCGRG00001012719	Smarca5	99	97.909	ENSMMUG00000000829	SMARCA5	99	97.909	Macaca_mulatta
ENSCGRG00001012719	Smarca5	99	97.909	ENSMNEG00000031916	SMARCA5	99	97.909	Macaca_nemestrina
ENSCGRG00001012719	Smarca5	99	97.909	ENSMLEG00000042393	SMARCA5	99	97.909	Mandrillus_leucophaeus
ENSCGRG00001012719	Smarca5	95	97.200	ENSMGAG00000003517	SMARCA5	99	97.200	Meleagris_gallopavo
ENSCGRG00001012719	Smarca5	94	100.000	ENSMAUG00000015902	Smarca5	98	100.000	Mesocricetus_auratus
ENSCGRG00001012719	Smarca5	99	98.004	ENSMICG00000003971	SMARCA5	99	98.004	Microcebus_murinus
ENSCGRG00001012719	Smarca5	99	98.006	ENSMOCG00000016986	-	100	98.006	Microtus_ochrogaster
ENSCGRG00001012719	Smarca5	99	96.058	ENSMODG00000000391	SMARCA5	95	98.899	Monodelphis_domestica
ENSCGRG00001012719	Smarca5	99	98.289	ENSMUSG00000031715	Smarca5	99	98.289	Mus_musculus
ENSCGRG00001012719	Smarca5	99	98.479	MGP_PahariEiJ_G0022862	Smarca5	99	98.479	Mus_pahari
ENSCGRG00001012719	Smarca5	99	98.099	ENSMLUG00000000468	SMARCA5	99	98.099	Myotis_lucifugus
ENSCGRG00001012719	Smarca5	99	98.289	ENSNGAG00000000441	Smarca5	99	98.289	Nannospalax_galili
ENSCGRG00001012719	Smarca5	99	97.909	ENSNLEG00000005383	SMARCA5	99	97.909	Nomascus_leucogenys
ENSCGRG00001012719	Smarca5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSCGRG00001012719	Smarca5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSCGRG00001012719	Smarca5	92	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSCGRG00001012719	Smarca5	92	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSCGRG00001012719	Smarca5	99	97.909	ENSOGAG00000009702	SMARCA5	99	97.909	Otolemur_garnettii
ENSCGRG00001012719	Smarca5	99	97.716	ENSOARG00000010589	SMARCA5	99	97.716	Ovis_aries
ENSCGRG00001012719	Smarca5	99	97.624	ENSPPAG00000028523	SMARCA5	99	99.295	Pan_paniscus
ENSCGRG00001012719	Smarca5	97	92.704	ENSPPRG00000004925	SMARCA5	95	94.223	Panthera_pardus
ENSCGRG00001012719	Smarca5	96	99.109	ENSPTIG00000020959	SMARCA5	97	99.109	Panthera_tigris_altaica
ENSCGRG00001012719	Smarca5	99	97.719	ENSPTRG00000016472	SMARCA5	99	99.396	Pan_troglodytes
ENSCGRG00001012719	Smarca5	99	97.909	ENSPANG00000001175	SMARCA5	99	97.909	Papio_anubis
ENSCGRG00001012719	Smarca5	97	87.464	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSCGRG00001012719	Smarca5	92	90.676	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSCGRG00001012719	Smarca5	94	95.988	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSCGRG00001012719	Smarca5	92	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSCGRG00001012719	Smarca5	95	98.807	ENSPEMG00000008060	Smarca5	99	98.807	Peromyscus_maniculatus_bairdii
ENSCGRG00001012719	Smarca5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSCGRG00001012719	Smarca5	95	69.655	ENSPMAG00000006011	SMARCA5	82	84.038	Petromyzon_marinus
ENSCGRG00001012719	Smarca5	99	95.743	ENSPCIG00000003926	SMARCA5	99	95.743	Phascolarctos_cinereus
ENSCGRG00001012719	Smarca5	99	98.004	ENSPPYG00000015091	SMARCA5	99	98.004	Pongo_abelii
ENSCGRG00001012719	Smarca5	86	89.055	ENSPCAG00000014230	SMARCA5	87	91.181	Procavia_capensis
ENSCGRG00001012719	Smarca5	99	95.247	ENSPCOG00000026744	SMARCA5	99	95.976	Propithecus_coquereli
ENSCGRG00001012719	Smarca5	99	97.719	ENSPVAG00000006482	SMARCA5	100	97.719	Pteropus_vampyrus
ENSCGRG00001012719	Smarca5	97	88.235	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSCGRG00001012719	Smarca5	94	99.799	ENSRNOG00000018149	Smarca5	100	99.799	Rattus_norvegicus
ENSCGRG00001012719	Smarca5	99	97.721	ENSRBIG00000044644	SMARCA5	99	97.721	Rhinopithecus_bieti
ENSCGRG00001012719	Smarca5	98	97.580	ENSRROG00000029591	SMARCA5	99	99.396	Rhinopithecus_roxellana
ENSCGRG00001012719	Smarca5	99	98.004	ENSSBOG00000036257	SMARCA5	99	98.004	Saimiri_boliviensis_boliviensis
ENSCGRG00001012719	Smarca5	94	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSCGRG00001012719	Smarca5	96	88.126	ENSSFOG00015013252	SMARCA5	97	89.631	Scleropages_formosus
ENSCGRG00001012719	Smarca5	96	94.892	ENSSPUG00000007604	SMARCA5	99	96.382	Sphenodon_punctatus
ENSCGRG00001012719	Smarca5	99	97.624	ENSSSCG00000009047	SMARCA5	99	97.624	Sus_scrofa
ENSCGRG00001012719	Smarca5	95	96.127	ENSTGUG00000002408	SMARCA5	99	96.127	Taeniopygia_guttata
ENSCGRG00001012719	Smarca5	98	97.868	ENSUAMG00000023495	SMARCA5	98	97.868	Ursus_americanus
ENSCGRG00001012719	Smarca5	95	99.302	ENSUMAG00000015324	SMARCA5	97	99.302	Ursus_maritimus
ENSCGRG00001012719	Smarca5	99	97.719	ENSVPAG00000008982	SMARCA5	99	97.719	Vicugna_pacos
ENSCGRG00001012719	Smarca5	99	97.909	ENSVVUG00000017473	SMARCA5	99	97.909	Vulpes_vulpes
ENSCGRG00001012719	Smarca5	95	88.878	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis