EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 1577 bases
Position: chrscaffold_4:52747445-52749021
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001010998	RRM_1	PF00076.22	8.2e-18	1	1
ENSCGRP00001010992	RRM_1	PF00076.22	8.8e-18	1	1
ENSCGRP00001010998	RRM_3	PF08777.11	9.1e-14	1	1
ENSCGRP00001010992	RRM_3	PF08777.11	9.6e-14	1	1
ENSCGRP00001010992	La	PF05383.17	7.8e-19	1	1
ENSCGRP00001010998	La	PF05383.17	8.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015221	-	1494	-	ENSCGRP00001010992	497 (aa)	-	-
ENSCGRT00001015227	-	1446	-	ENSCGRP00001010998	481 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012747	-	99	88.911	ENSCGRG00001025050	-	90	88.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012747	-	95	73.307	ENSG00000174720	LARP7	100	81.513	Homo_sapiens
ENSCGRG00001012747	-	98	48.654	ENSAPOG00000014570	larp7	89	47.348	Acanthochromis_polyacanthus
ENSCGRG00001012747	-	99	71.347	ENSAMEG00000015642	LARP7	90	71.157	Ailuropoda_melanoleuca
ENSCGRG00001012747	-	98	45.776	ENSACIG00000023850	larp7	85	45.726	Amphilophus_citrinellus
ENSCGRG00001012747	-	95	48.521	ENSAOCG00000016160	larp7	85	47.024	Amphiprion_ocellaris
ENSCGRG00001012747	-	95	47.348	ENSAPEG00000021823	larp7	90	46.394	Amphiprion_percula
ENSCGRG00001012747	-	98	50.097	ENSATEG00000016238	larp7	85	48.907	Anabas_testudineus
ENSCGRG00001012747	-	99	60.329	ENSAPLG00000012887	LARP7	86	59.231	Anas_platyrhynchos
ENSCGRG00001012747	-	99	58.692	ENSACAG00000010662	LARP7	82	58.268	Anolis_carolinensis
ENSCGRG00001012747	-	94	72.379	ENSANAG00000031139	-	90	71.128	Aotus_nancymaae
ENSCGRG00001012747	-	95	64.865	ENSANAG00000022318	-	91	62.868	Aotus_nancymaae
ENSCGRG00001012747	-	98	46.875	ENSACLG00000023184	larp7	85	49.290	Astatotilapia_calliptera
ENSCGRG00001012747	-	97	49.606	ENSAMXG00000002549	larp7	85	48.723	Astyanax_mexicanus
ENSCGRG00001012747	-	99	71.293	ENSBTAG00000009632	LARP7	88	71.103	Bos_taurus
ENSCGRG00001012747	-	95	73.852	ENSCJAG00000003711	LARP7	90	71.970	Callithrix_jacchus
ENSCGRG00001012747	-	95	71.769	ENSCAFG00000011715	LARP7	90	70.888	Canis_familiaris
ENSCGRG00001012747	-	95	72.600	ENSCAFG00020017225	LARP7	90	71.673	Canis_lupus_dingo
ENSCGRG00001012747	-	99	64.484	ENSCHIG00000013971	-	91	62.698	Capra_hircus
ENSCGRG00001012747	-	95	72.200	ENSCHIG00000014163	-	90	71.863	Capra_hircus
ENSCGRG00001012747	-	95	65.992	ENSTSYG00000035188	-	88	65.927	Carlito_syrichta
ENSCGRG00001012747	-	95	74.052	ENSTSYG00000006769	-	97	73.055	Carlito_syrichta
ENSCGRG00001012747	-	99	63.178	ENSCAPG00000009328	LARP7	89	62.791	Cavia_aperea
ENSCGRG00001012747	-	99	70.793	ENSCPOG00000011830	LARP7	90	70.600	Cavia_porcellus
ENSCGRG00001012747	-	95	73.559	ENSCCAG00000026787	-	90	72.264	Cebus_capucinus
ENSCGRG00001012747	-	95	67.629	ENSCCAG00000023563	-	89	67.629	Cebus_capucinus
ENSCGRG00001012747	-	95	73.253	ENSCATG00000043535	LARP7	90	73.106	Cercocebus_atys
ENSCGRG00001012747	-	99	73.256	ENSCLAG00000005894	LARP7	90	73.256	Chinchilla_lanigera
ENSCGRG00001012747	-	95	73.453	ENSCSAG00000003810	LARP7	90	73.295	Chlorocebus_sabaeus
ENSCGRG00001012747	-	92	60.494	ENSCHOG00000008967	-	89	60.494	Choloepus_hoffmanni
ENSCGRG00001012747	-	99	71.128	ENSCHOG00000002379	-	90	71.128	Choloepus_hoffmanni
ENSCGRG00001012747	-	95	60.039	ENSCPBG00000004919	LARP7	87	61.165	Chrysemys_picta_bellii
ENSCGRG00001012747	-	95	73.506	ENSCANG00000031482	LARP7	89	73.346	Colobus_angolensis_palliatus
ENSCGRG00001012747	-	99	99.394	ENSCGRG00000007642	-	93	99.394	Cricetulus_griseus_crigri
ENSCGRG00001012747	-	99	82.685	ENSCGRG00000001141	-	94	82.296	Cricetulus_griseus_crigri
ENSCGRG00001012747	-	97	47.082	ENSCSEG00000009088	larp7	85	47.211	Cynoglossus_semilaevis
ENSCGRG00001012747	-	96	48.971	ENSCVAG00000016852	larp7	80	69.945	Cyprinodon_variegatus
ENSCGRG00001012747	-	97	49.216	ENSDARG00000017315	larp7	84	47.390	Danio_rerio
ENSCGRG00001012747	-	99	71.509	ENSDNOG00000013761	LARP7	90	71.887	Dasypus_novemcinctus
ENSCGRG00001012747	-	95	74.233	ENSDORG00000008896	-	86	73.000	Dipodomys_ordii
ENSCGRG00001012747	-	95	66.000	ENSETEG00000011692	LARP7	85	66.333	Echinops_telfairi
ENSCGRG00001012747	-	99	71.023	ENSEASG00005005592	LARP7	90	70.833	Equus_asinus_asinus
ENSCGRG00001012747	-	99	71.212	ENSECAG00000000834	LARP7	90	71.023	Equus_caballus
ENSCGRG00001012747	-	95	71.831	ENSEEUG00000012824	LARP7	94	70.937	Erinaceus_europaeus
ENSCGRG00001012747	-	98	47.217	ENSELUG00000015341	larp7	80	69.192	Esox_lucius
ENSCGRG00001012747	-	95	73.200	ENSFCAG00000031966	LARP7	86	73.547	Felis_catus
ENSCGRG00001012747	-	99	62.172	ENSFALG00000000972	LARP7	88	60.300	Ficedula_albicollis
ENSCGRG00001012747	-	99	65.517	ENSFDAG00000011855	-	90	66.540	Fukomys_damarensis
ENSCGRG00001012747	-	95	72.874	ENSFDAG00000014048	-	90	71.567	Fukomys_damarensis
ENSCGRG00001012747	-	96	48.008	ENSFHEG00000021652	larp7	85	48.104	Fundulus_heteroclitus
ENSCGRG00001012747	-	99	60.185	ENSGALG00000012048	LARP7	90	58.704	Gallus_gallus
ENSCGRG00001012747	-	96	47.327	ENSGAFG00000015400	larp7	85	48.460	Gambusia_affinis
ENSCGRG00001012747	-	99	45.018	ENSGACG00000019618	larp7	80	67.582	Gasterosteus_aculeatus
ENSCGRG00001012747	-	95	59.806	ENSGAGG00000024520	LARP7	86	61.165	Gopherus_agassizii
ENSCGRG00001012747	-	89	70.213	ENSGGOG00000006438	-	88	71.800	Gorilla_gorilla
ENSCGRG00001012747	-	95	73.506	ENSGGOG00000023567	-	90	72.212	Gorilla_gorilla
ENSCGRG00001012747	-	98	47.070	ENSHBUG00000019223	larp7	85	49.493	Haplochromis_burtoni
ENSCGRG00001012747	-	95	70.949	ENSHGLG00000002716	LARP7	90	69.905	Heterocephalus_glaber_female
ENSCGRG00001012747	-	95	70.949	ENSHGLG00100000332	LARP7	90	69.905	Heterocephalus_glaber_male
ENSCGRG00001012747	-	96	47.784	ENSIPUG00000019886	larp7	85	46.124	Ictalurus_punctatus
ENSCGRG00001012747	-	99	72.814	ENSSTOG00000011789	LARP7	90	73.574	Ictidomys_tridecemlineatus
ENSCGRG00001012747	-	99	74.138	ENSJJAG00000000257	-	90	73.563	Jaculus_jaculus
ENSCGRG00001012747	-	97	46.720	ENSKMAG00000005057	larp7	85	48.057	Kryptolebias_marmoratus
ENSCGRG00001012747	-	98	45.558	ENSLBEG00000020062	larp7	86	42.718	Labrus_bergylta
ENSCGRG00001012747	-	98	51.292	ENSLACG00000013744	LARP7	86	50.860	Latimeria_chalumnae
ENSCGRG00001012747	-	95	41.667	ENSLOCG00000011608	larp7	86	41.746	Lepisosteus_oculatus
ENSCGRG00001012747	-	99	73.664	ENSLAFG00000015769	LARP7	90	74.046	Loxodonta_africana
ENSCGRG00001012747	-	95	73.253	ENSMFAG00000036506	LARP7	90	73.106	Macaca_fascicularis
ENSCGRG00001012747	-	95	73.253	ENSMMUG00000017911	LARP7	90	73.106	Macaca_mulatta
ENSCGRG00001012747	-	95	73.453	ENSMNEG00000034758	LARP7	90	73.295	Macaca_nemestrina
ENSCGRG00001012747	-	95	73.453	ENSMLEG00000026154	LARP7	90	73.295	Mandrillus_leucophaeus
ENSCGRG00001012747	-	97	44.732	ENSMAMG00000005835	larp7	85	47.764	Mastacembelus_armatus
ENSCGRG00001012747	-	98	46.875	ENSMZEG00005002084	larp7	85	49.290	Maylandia_zebra
ENSCGRG00001012747	-	99	60.795	ENSMGAG00000010947	LARP7	90	59.659	Meleagris_gallopavo
ENSCGRG00001012747	-	89	84.424	ENSMAUG00000005625	-	89	83.747	Mesocricetus_auratus
ENSCGRG00001012747	-	95	74.451	ENSMICG00000031035	LARP7	90	72.917	Microcebus_murinus
ENSCGRG00001012747	-	88	79.295	ENSMOCG00000015761	-	89	78.855	Microtus_ochrogaster
ENSCGRG00001012747	-	99	82.625	ENSMOCG00000012519	-	90	82.239	Microtus_ochrogaster
ENSCGRG00001012747	-	99	62.268	ENSMODG00000005669	LARP7	91	61.896	Monodelphis_domestica
ENSCGRG00001012747	-	99	81.888	MGP_CAROLIEiJ_G0025613	-	88	92.784	Mus_caroli
ENSCGRG00001012747	-	99	80.925	ENSMUSG00000027968	Larp7	99	86.250	Mus_musculus
ENSCGRG00001012747	-	52	82.353	ENSMUSG00000066107	Gm12666	100	81.961	Mus_musculus
ENSCGRG00001012747	-	99	81.467	MGP_PahariEiJ_G0027060	-	90	81.081	Mus_pahari
ENSCGRG00001012747	-	99	81.731	MGP_SPRETEiJ_G0026566	Larp7	88	93.814	Mus_spretus
ENSCGRG00001012747	-	95	71.281	ENSMPUG00000018052	-	89	71.488	Mustela_putorius_furo
ENSCGRG00001012747	-	95	73.200	ENSMPUG00000008331	-	90	72.433	Mustela_putorius_furo
ENSCGRG00001012747	-	84	62.667	ENSMLUG00000027214	LARP7	89	63.111	Myotis_lucifugus
ENSCGRG00001012747	-	99	73.714	ENSNGAG00000007368	-	90	74.095	Nannospalax_galili
ENSCGRG00001012747	-	95	73.253	ENSNLEG00000016354	LARP7	89	71.970	Nomascus_leucogenys
ENSCGRG00001012747	-	91	62.656	ENSMEUG00000004739	LARP7	94	60.915	Notamacropus_eugenii
ENSCGRG00001012747	-	89	76.623	ENSOPRG00000009594	-	77	76.623	Ochotona_princeps
ENSCGRG00001012747	-	99	70.229	ENSODEG00000011121	LARP7	92	70.229	Octodon_degus
ENSCGRG00001012747	-	95	47.000	ENSONIG00000008763	larp7	85	49.087	Oreochromis_niloticus
ENSCGRG00001012747	-	99	63.265	ENSOANG00000009298	LARP7	90	64.193	Ornithorhynchus_anatinus
ENSCGRG00001012747	-	99	71.023	ENSOCUG00000007073	LARP7	90	70.833	Oryctolagus_cuniculus
ENSCGRG00001012747	-	95	49.689	ENSORLG00000004978	larp7	84	49.064	Oryzias_latipes
ENSCGRG00001012747	-	95	49.896	ENSORLG00020013825	larp7	84	49.897	Oryzias_latipes_hni
ENSCGRG00001012747	-	96	49.174	ENSOMEG00000006920	larp7	85	49.480	Oryzias_melastigma
ENSCGRG00001012747	-	95	73.559	ENSOGAG00000001643	LARP7	90	71.698	Otolemur_garnettii
ENSCGRG00001012747	-	95	72.366	ENSOARG00000001809	LARP7	90	71.456	Ovis_aries
ENSCGRG00001012747	-	95	72.908	ENSPPAG00000038420	LARP7	89	71.645	Pan_paniscus
ENSCGRG00001012747	-	95	73.054	ENSPPRG00000023256	LARP7	86	73.400	Panthera_pardus
ENSCGRG00001012747	-	95	73.200	ENSPTIG00000021146	LARP7	86	73.547	Panthera_tigris_altaica
ENSCGRG00001012747	-	95	73.307	ENSPTRG00000016380	LARP7	90	72.023	Pan_troglodytes
ENSCGRG00001012747	-	95	73.307	ENSPANG00000006701	LARP7	89	73.157	Papio_anubis
ENSCGRG00001012747	-	98	50.386	ENSPKIG00000023484	larp7	85	50.495	Paramormyrops_kingsleyae
ENSCGRG00001012747	-	99	61.194	ENSPSIG00000014419	LARP7	85	61.914	Pelodiscus_sinensis
ENSCGRG00001012747	-	99	81.664	ENSPEMG00000013978	-	90	81.285	Peromyscus_maniculatus_bairdii
ENSCGRG00001012747	-	99	62.127	ENSPCIG00000020284	LARP7	83	61.967	Phascolarctos_cinereus
ENSCGRG00001012747	-	96	49.091	ENSPFOG00000000265	larp7	85	48.262	Poecilia_formosa
ENSCGRG00001012747	-	96	47.826	ENSPLAG00000012181	larp7	85	48.262	Poecilia_latipinna
ENSCGRG00001012747	-	96	47.826	ENSPMEG00000007182	larp7	85	48.262	Poecilia_mexicana
ENSCGRG00001012747	-	99	47.115	ENSPREG00000019513	larp7	85	47.959	Poecilia_reticulata
ENSCGRG00001012747	-	95	73.307	ENSPPYG00000015010	LARP7	90	72.023	Pongo_abelii
ENSCGRG00001012747	-	63	77.419	ENSPCAG00000003373	-	61	77.419	Procavia_capensis
ENSCGRG00001012747	-	95	65.756	ENSPCOG00000023946	LARP7	89	66.034	Propithecus_coquereli
ENSCGRG00001012747	-	99	67.170	ENSPVAG00000000282	LARP7	90	66.792	Pteropus_vampyrus
ENSCGRG00001012747	-	95	49.407	ENSPNAG00000017554	larp7	85	49.307	Pygocentrus_nattereri
ENSCGRG00001012747	-	99	77.713	ENSRNOG00000048989	Larp7	100	75.385	Rattus_norvegicus
ENSCGRG00001012747	-	86	71.744	ENSRBIG00000031916	LARP7	99	71.399	Rhinopithecus_bieti
ENSCGRG00001012747	-	95	73.253	ENSRROG00000033414	LARP7	90	73.106	Rhinopithecus_roxellana
ENSCGRG00001012747	-	93	61.099	ENSSBOG00000022652	-	88	61.099	Saimiri_boliviensis_boliviensis
ENSCGRG00001012747	-	95	73.559	ENSSBOG00000030886	-	90	71.917	Saimiri_boliviensis_boliviensis
ENSCGRG00001012747	-	99	60.374	ENSSHAG00000008153	LARP7	91	60.595	Sarcophilus_harrisii
ENSCGRG00001012747	-	96	47.937	ENSSFOG00015019344	larp7	85	48.119	Scleropages_formosus
ENSCGRG00001012747	-	95	49.310	ENSSMAG00000011296	larp7	89	48.582	Scophthalmus_maximus
ENSCGRG00001012747	-	53	67.518	ENSSARG00000000190	-	91	65.950	Sorex_araneus
ENSCGRG00001012747	-	98	49.133	ENSSPAG00000016066	larp7	88	48.654	Stegastes_partitus
ENSCGRG00001012747	-	95	72.745	ENSSSCG00000009119	LARP7	86	72.490	Sus_scrofa
ENSCGRG00001012747	-	99	61.742	ENSTGUG00000001804	LARP7	90	60.491	Taeniopygia_guttata
ENSCGRG00001012747	-	95	42.200	ENSTNIG00000007183	larp7	85	42.084	Tetraodon_nigroviridis
ENSCGRG00001012747	-	95	70.080	ENSTBEG00000009188	LARP7	88	69.667	Tupaia_belangeri
ENSCGRG00001012747	-	89	67.091	ENSTTRG00000005233	LARP7	89	69.639	Tursiops_truncatus
ENSCGRG00001012747	-	95	72.400	ENSUAMG00000000836	LARP7	90	70.588	Ursus_americanus
ENSCGRG00001012747	-	95	72.400	ENSUMAG00000002263	LARP7	91	70.588	Ursus_maritimus
ENSCGRG00001012747	-	95	71.657	ENSVPAG00000010502	LARP7	90	70.265	Vicugna_pacos
ENSCGRG00001012747	-	95	72.800	ENSVVUG00000002274	LARP7	90	71.863	Vulpes_vulpes
ENSCGRG00001012747	-	98	53.283	ENSXETG00000024097	larp7	85	53.295	Xenopus_tropicalis
ENSCGRG00001012747	-	96	47.959	ENSXCOG00000004883	larp7	84	68.852	Xiphophorus_couchianus
ENSCGRG00001012747	-	96	47.495	ENSXMAG00000008479	larp7	85	47.433	Xiphophorus_maculatus