EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012803 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 5280 bases
Position: chrscaffold_0:126386821-126392100
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	1	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	2	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	3	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	4	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	5	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	6	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	7	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	8	9
ENSCGRP00001011059	zf-C2H2	PF00096.26	2.3e-50	9	9
ENSCGRP00001011059	zf-met	PF12874.7	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015288	-	1164	-	ENSCGRP00001011059	387 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012803	-	76	49.333	ENSCGRG00001012523	-	98	49.333
ENSCGRG00001012803	-	94	49.115	ENSCGRG00001007163	-	99	50.000
ENSCGRG00001012803	-	80	45.673	ENSCGRG00001019468	Zfp628	59	45.673
ENSCGRG00001012803	-	94	49.004	ENSCGRG00001001639	Zfp882	99	49.004
ENSCGRG00001012803	-	91	62.500	ENSCGRG00001020646	Gm3854	74	62.500
ENSCGRG00001012803	-	85	35.156	ENSCGRG00001009557	Zfp319	92	38.326
ENSCGRG00001012803	-	94	53.097	ENSCGRG00001021088	Zfp354a	98	53.097
ENSCGRG00001012803	-	94	50.404	ENSCGRG00001024630	-	96	51.527
ENSCGRG00001012803	-	94	52.381	ENSCGRG00001000576	Zfp26	89	52.381
ENSCGRG00001012803	-	76	50.199	ENSCGRG00001013561	Zfp768	55	47.368
ENSCGRG00001012803	-	79	48.864	ENSCGRG00001012398	Zfp236	69	47.619
ENSCGRG00001012803	-	79	40.136	ENSCGRG00001019408	Zbtb17	55	41.971
ENSCGRG00001012803	-	94	52.632	ENSCGRG00001023858	Zfp560	89	52.632
ENSCGRG00001012803	-	67	42.391	ENSCGRG00001004071	Patz1	52	41.304
ENSCGRG00001012803	-	94	50.649	ENSCGRG00001002406	Zfp39	92	50.649
ENSCGRG00001012803	-	89	52.284	ENSCGRG00001010967	Zfp1	98	52.284
ENSCGRG00001012803	-	77	30.851	ENSCGRG00001023063	Zfp423	95	30.481
ENSCGRG00001012803	-	76	51.394	ENSCGRG00001015424	-	66	51.394
ENSCGRG00001012803	-	95	54.980	ENSCGRG00001013939	Zfp454	79	54.980
ENSCGRG00001012803	-	91	46.875	ENSCGRG00001010581	Prdm5	89	46.875
ENSCGRG00001012803	-	94	57.333	ENSCGRG00001007115	-	100	57.333
ENSCGRG00001012803	-	74	37.662	ENSCGRG00001008879	Maz	61	34.314
ENSCGRG00001012803	-	89	43.496	ENSCGRG00001018100	Zfp202	65	43.496
ENSCGRG00001012803	-	94	38.272	ENSCGRG00001006591	Zkscan3	58	48.031
ENSCGRG00001012803	-	76	37.576	ENSCGRG00001013598	Zfp865	71	36.527
ENSCGRG00001012803	-	86	45.312	ENSCGRG00001002297	-	100	45.312
ENSCGRG00001012803	-	81	35.220	ENSCGRG00001017330	Repin1	83	35.220
ENSCGRG00001012803	-	78	53.527	ENSCGRG00001012640	Zfp94	85	53.527
ENSCGRG00001012803	-	78	49.730	ENSCGRG00001013602	-	97	49.730
ENSCGRG00001012803	-	76	41.259	ENSCGRG00001024806	Zbtb16	51	41.259
ENSCGRG00001012803	-	76	46.599	ENSCGRG00001004047	-	67	46.599
ENSCGRG00001012803	-	76	42.202	ENSCGRG00001013674	Snai2	66	42.202
ENSCGRG00001012803	-	80	48.624	ENSCGRG00001001429	Zfp574	86	35.197
ENSCGRG00001012803	-	76	54.444	ENSCGRG00001013367	Zfp61	53	54.444
ENSCGRG00001012803	-	89	48.851	ENSCGRG00001011074	Mynn	55	48.851
ENSCGRG00001012803	-	76	32.727	ENSCGRG00001013279	Zfp784	67	38.776
ENSCGRG00001012803	-	94	51.902	ENSCGRG00001024303	-	99	53.077
ENSCGRG00001012803	-	94	47.157	ENSCGRG00001011966	Zfp715	79	47.157
ENSCGRG00001012803	-	83	48.889	ENSCGRG00001019143	-	93	48.889
ENSCGRG00001012803	-	95	51.667	ENSCGRG00001017579	Zfp112	60	51.667
ENSCGRG00001012803	-	94	49.130	ENSCGRG00001010752	2610008E11Rik	95	49.130
ENSCGRG00001012803	-	76	42.241	ENSCGRG00001005125	Wt1	53	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012803	-	76	52.778	ENSAOCG00000013672	-	94	52.261	Amphiprion_ocellaris
ENSCGRG00001012803	-	83	49.778	ENSACLG00000008821	-	96	49.778	Astatotilapia_calliptera
ENSCGRG00001012803	-	77	51.190	ENSAMXG00000037981	-	78	51.190	Astyanax_mexicanus
ENSCGRG00001012803	-	73	47.917	ENSAMXG00000036241	-	83	47.222	Astyanax_mexicanus
ENSCGRG00001012803	-	79	53.182	ENSAMXG00000043423	-	98	53.182	Astyanax_mexicanus
ENSCGRG00001012803	-	77	50.000	ENSAMXG00000040677	-	87	50.000	Astyanax_mexicanus
ENSCGRG00001012803	-	76	48.583	ENSAMXG00000036633	-	62	48.583	Astyanax_mexicanus
ENSCGRG00001012803	-	93	54.626	ENSTSYG00000006246	-	99	54.626	Carlito_syrichta
ENSCGRG00001012803	-	100	100.000	ENSCGRG00000009742	-	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001012803	-	87	51.542	ENSCGRG00000008531	-	98	50.562	Cricetulus_griseus_crigri
ENSCGRG00001012803	-	77	42.995	ENSEBUG00000003236	-	93	44.751	Eptatretus_burgeri
ENSCGRG00001012803	-	78	55.372	ENSEBUG00000015834	-	84	55.372	Eptatretus_burgeri
ENSCGRG00001012803	-	77	47.321	ENSEBUG00000017017	-	62	47.321	Eptatretus_burgeri
ENSCGRG00001012803	-	77	45.490	ENSEBUG00000001121	-	80	45.490	Eptatretus_burgeri
ENSCGRG00001012803	-	76	45.528	ENSEBUG00000007375	-	84	45.528	Eptatretus_burgeri
ENSCGRG00001012803	-	76	42.081	ENSEBUG00000015993	-	66	42.081	Eptatretus_burgeri
ENSCGRG00001012803	-	82	48.661	ENSEBUG00000003590	-	74	47.186	Eptatretus_burgeri
ENSCGRG00001012803	-	76	48.223	ENSIPUG00000013315	-	94	48.223	Ictalurus_punctatus
ENSCGRG00001012803	-	93	51.362	ENSMAUG00000016437	-	100	49.446	Mesocricetus_auratus
ENSCGRG00001012803	-	95	82.834	ENSMAUG00000005691	-	90	82.834	Mesocricetus_auratus
ENSCGRG00001012803	-	94	76.309	ENSMOCG00000000365	-	93	78.689	Microtus_ochrogaster
ENSCGRG00001012803	-	94	54.286	MGP_CAROLIEiJ_G0018683	Zfp493	99	54.286	Mus_caroli
ENSCGRG00001012803	-	97	77.600	MGP_CAROLIEiJ_G0018660	-	79	80.423	Mus_caroli
ENSCGRG00001012803	-	94	88.011	ENSMUSG00000074824	Rslcan18	80	88.011	Mus_musculus
ENSCGRG00001012803	-	91	58.621	ENSMUSG00000091474	2610021A01Rik	70	58.621	Mus_musculus
ENSCGRG00001012803	-	91	57.627	MGP_PahariEiJ_G0012839	-	71	57.627	Mus_pahari
ENSCGRG00001012803	-	94	79.670	MGP_SPRETEiJ_G0019543	-	78	82.561	Mus_spretus
ENSCGRG00001012803	-	78	42.609	ENSPMAG00000000404	-	99	42.609	Petromyzon_marinus
ENSCGRG00001012803	-	88	50.883	ENSPNAG00000014492	-	89	50.883	Pygocentrus_nattereri
ENSCGRG00001012803	-	76	50.000	ENSPNAG00000003017	-	86	50.000	Pygocentrus_nattereri
ENSCGRG00001012803	-	94	56.213	ENSSSCG00000040389	-	99	55.466	Sus_scrofa
ENSCGRG00001012803	-	89	38.863	ENSTRUG00000014476	-	89	38.863	Takifugu_rubripes