EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001012928 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 11986 bases
Position: chrscaffold_31:17376426-17388411
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001011237	RRM_1	PF00076.22	6.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015466	-	714	-	ENSCGRP00001011237	237 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001012928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001012928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001012928	Rbm38	62	38.158	ENSCGRG00001018883	Msi1	62	51.064
ENSCGRG00001012928	Rbm38	63	79.085	ENSCGRG00001010535	Rbm24	100	66.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001012928	Rbm38	100	92.469	ENSG00000132819	RBM38	100	95.041	Homo_sapiens
ENSCGRG00001012928	Rbm38	89	58.621	ENSAPOG00000003301	rbm38	72	65.574	Acanthochromis_polyacanthus
ENSCGRG00001012928	Rbm38	93	66.372	ENSAPOG00000009939	-	96	65.487	Acanthochromis_polyacanthus
ENSCGRG00001012928	Rbm38	93	64.629	ENSACIG00000012502	-	100	87.179	Amphilophus_citrinellus
ENSCGRG00001012928	Rbm38	89	57.082	ENSACIG00000000010	rbm38	72	63.934	Amphilophus_citrinellus
ENSCGRG00001012928	Rbm38	89	58.621	ENSAOCG00000013497	-	72	65.574	Amphiprion_ocellaris
ENSCGRG00001012928	Rbm38	93	66.372	ENSAOCG00000012559	RBM38	93	65.198	Amphiprion_ocellaris
ENSCGRG00001012928	Rbm38	89	62.326	ENSAPEG00000013137	rbm38	88	60.930	Amphiprion_percula
ENSCGRG00001012928	Rbm38	93	61.570	ENSAPEG00000023581	-	75	71.809	Amphiprion_percula
ENSCGRG00001012928	Rbm38	89	62.771	ENSATEG00000016710	-	72	73.626	Anabas_testudineus
ENSCGRG00001012928	Rbm38	91	61.504	ENSATEG00000016366	rbm38	75	68.362	Anabas_testudineus
ENSCGRG00001012928	Rbm38	92	77.273	ENSACAG00000016238	RBM38	97	73.418	Anolis_carolinensis
ENSCGRG00001012928	Rbm38	91	94.444	ENSANAG00000031959	RBM38	100	95.868	Aotus_nancymaae
ENSCGRG00001012928	Rbm38	89	64.069	ENSACLG00000019514	-	92	64.655	Astatotilapia_calliptera
ENSCGRG00001012928	Rbm38	93	64.957	ENSAMXG00000015601	-	97	64.530	Astyanax_mexicanus
ENSCGRG00001012928	Rbm38	78	64.865	ENSAMXG00000038120	rbm38	71	68.235	Astyanax_mexicanus
ENSCGRG00001012928	Rbm38	100	90.377	ENSBTAG00000008105	RBM38	100	90.377	Bos_taurus
ENSCGRG00001012928	Rbm38	100	93.305	ENSCJAG00000019139	RBM38	100	95.868	Callithrix_jacchus
ENSCGRG00001012928	Rbm38	100	91.213	ENSCAFG00020021943	RBM38	100	91.213	Canis_lupus_dingo
ENSCGRG00001012928	Rbm38	100	89.540	ENSCHIG00000002609	RBM38	100	89.540	Capra_hircus
ENSCGRG00001012928	Rbm38	100	92.469	ENSCPOG00000012781	RBM38	100	92.469	Cavia_porcellus
ENSCGRG00001012928	Rbm38	100	93.305	ENSCCAG00000036872	RBM38	100	95.868	Cebus_capucinus
ENSCGRG00001012928	Rbm38	100	92.050	ENSCATG00000032133	RBM38	100	95.868	Cercocebus_atys
ENSCGRG00001012928	Rbm38	95	93.363	ENSCLAG00000005906	RBM38	98	93.363	Chinchilla_lanigera
ENSCGRG00001012928	Rbm38	100	92.050	ENSCSAG00000015503	RBM38	100	92.050	Chlorocebus_sabaeus
ENSCGRG00001012928	Rbm38	91	78.440	ENSCPBG00000024059	RBM38	100	77.982	Chrysemys_picta_bellii
ENSCGRG00001012928	Rbm38	99	70.168	ENSCANG00000030105	-	89	70.168	Colobus_angolensis_palliatus
ENSCGRG00001012928	Rbm38	62	68.667	ENSCSEG00000020943	rbm38	60	61.957	Cynoglossus_semilaevis
ENSCGRG00001012928	Rbm38	93	67.544	ENSCSEG00000004701	-	96	65.333	Cynoglossus_semilaevis
ENSCGRG00001012928	Rbm38	89	58.621	ENSCVAG00000015952	rbm38	72	65.574	Cyprinodon_variegatus
ENSCGRG00001012928	Rbm38	89	65.086	ENSCVAG00000005472	-	72	75.824	Cyprinodon_variegatus
ENSCGRG00001012928	Rbm38	89	63.677	ENSDARG00000058818	rbm38	74	72.222	Danio_rerio
ENSCGRG00001012928	Rbm38	91	85.648	ENSDNOG00000032004	RBM38	100	84.259	Dasypus_novemcinctus
ENSCGRG00001012928	Rbm38	100	90.795	ENSECAG00000007700	RBM38	100	90.795	Equus_caballus
ENSCGRG00001012928	Rbm38	100	87.917	ENSEEUG00000013489	RBM38	100	89.167	Erinaceus_europaeus
ENSCGRG00001012928	Rbm38	84	65.174	ENSELUG00000000585	-	78	67.778	Esox_lucius
ENSCGRG00001012928	Rbm38	92	63.598	ENSELUG00000005849	-	95	63.291	Esox_lucius
ENSCGRG00001012928	Rbm38	100	90.795	ENSFCAG00000042916	RBM38	100	94.215	Felis_catus
ENSCGRG00001012928	Rbm38	75	80.337	ENSFALG00000010805	RBM38	93	80.447	Ficedula_albicollis
ENSCGRG00001012928	Rbm38	89	57.511	ENSFHEG00000017748	rbm38	72	64.481	Fundulus_heteroclitus
ENSCGRG00001012928	Rbm38	89	71.296	ENSFHEG00000006160	-	92	69.907	Fundulus_heteroclitus
ENSCGRG00001012928	Rbm38	76	70.718	ENSGMOG00000016655	-	96	73.626	Gadus_morhua
ENSCGRG00001012928	Rbm38	91	77.064	ENSGALG00000026081	RBM38	100	76.606	Gallus_gallus
ENSCGRG00001012928	Rbm38	91	65.919	ENSGACG00000009873	-	100	65.625	Gasterosteus_aculeatus
ENSCGRG00001012928	Rbm38	89	62.736	ENSGACG00000015224	rbm38	98	61.792	Gasterosteus_aculeatus
ENSCGRG00001012928	Rbm38	91	78.899	ENSGAGG00000001187	RBM38	100	78.440	Gopherus_agassizii
ENSCGRG00001012928	Rbm38	89	68.349	ENSHBUG00000011778	-	92	69.406	Haplochromis_burtoni
ENSCGRG00001012928	Rbm38	100	57.959	ENSHBUG00000012058	rbm38	81	62.626	Haplochromis_burtoni
ENSCGRG00001012928	Rbm38	100	90.377	ENSHGLG00000015077	RBM38	100	90.377	Heterocephalus_glaber_female
ENSCGRG00001012928	Rbm38	81	69.898	ENSHCOG00000005622	-	54	70.984	Hippocampus_comes
ENSCGRG00001012928	Rbm38	63	68.874	ENSHCOG00000019040	rbm38	65	68.874	Hippocampus_comes
ENSCGRG00001012928	Rbm38	100	61.111	ENSIPUG00000019349	-	100	59.921	Ictalurus_punctatus
ENSCGRG00001012928	Rbm38	89	52.966	ENSKMAG00000012402	rbm38	79	57.447	Kryptolebias_marmoratus
ENSCGRG00001012928	Rbm38	89	68.349	ENSLBEG00000016163	RBM38	97	63.303	Labrus_bergylta
ENSCGRG00001012928	Rbm38	89	58.369	ENSLBEG00000018878	rbm38	72	65.574	Labrus_bergylta
ENSCGRG00001012928	Rbm38	92	69.912	ENSLOCG00000003456	rbm38	95	69.912	Lepisosteus_oculatus
ENSCGRG00001012928	Rbm38	97	92.241	ENSMFAG00000043808	RBM38	94	96.491	Macaca_fascicularis
ENSCGRG00001012928	Rbm38	100	92.050	ENSMMUG00000031391	RBM38	100	95.868	Macaca_mulatta
ENSCGRG00001012928	Rbm38	100	92.050	ENSMNEG00000034683	RBM38	100	95.868	Macaca_nemestrina
ENSCGRG00001012928	Rbm38	89	58.369	ENSMAMG00000024135	rbm38	72	65.574	Mastacembelus_armatus
ENSCGRG00001012928	Rbm38	93	60.000	ENSMAMG00000020499	RBM38	96	62.083	Mastacembelus_armatus
ENSCGRG00001012928	Rbm38	89	68.349	ENSMZEG00005000849	-	92	69.406	Maylandia_zebra
ENSCGRG00001012928	Rbm38	89	57.940	ENSMZEG00005026036	rbm38	72	64.481	Maylandia_zebra
ENSCGRG00001012928	Rbm38	100	97.890	ENSMAUG00000021211	Rbm38	100	97.890	Mesocricetus_auratus
ENSCGRG00001012928	Rbm38	91	94.444	ENSMICG00000038011	RBM38	100	94.444	Microcebus_murinus
ENSCGRG00001012928	Rbm38	100	97.046	ENSMOCG00000008715	Rbm38	100	97.046	Microtus_ochrogaster
ENSCGRG00001012928	Rbm38	95	65.801	ENSMMOG00000020051	-	97	67.241	Mola_mola
ENSCGRG00001012928	Rbm38	100	75.314	ENSMODG00000016458	RBM38	100	74.895	Monodelphis_domestica
ENSCGRG00001012928	Rbm38	63	71.895	ENSMALG00000022327	rbm38	66	71.895	Monopterus_albus
ENSCGRG00001012928	Rbm38	80	71.503	ENSMALG00000004680	RBM38	71	71.503	Monopterus_albus
ENSCGRG00001012928	Rbm38	100	95.359	MGP_CAROLIEiJ_G0024745	Rbm38	100	95.359	Mus_caroli
ENSCGRG00001012928	Rbm38	100	95.781	ENSMUSG00000027510	Rbm38	100	95.781	Mus_musculus
ENSCGRG00001012928	Rbm38	100	95.781	MGP_PahariEiJ_G0026186	Rbm38	100	95.781	Mus_pahari
ENSCGRG00001012928	Rbm38	100	96.203	MGP_SPRETEiJ_G0025665	Rbm38	100	96.203	Mus_spretus
ENSCGRG00001012928	Rbm38	78	92.973	ENSMPUG00000006518	RBM38	91	92.935	Mustela_putorius_furo
ENSCGRG00001012928	Rbm38	91	88.889	ENSMLUG00000011140	RBM38	100	88.889	Myotis_lucifugus
ENSCGRG00001012928	Rbm38	100	58.130	ENSNBRG00000022685	rbm38	84	61.165	Neolamprologus_brichardi
ENSCGRG00001012928	Rbm38	89	64.069	ENSNBRG00000022545	-	92	64.224	Neolamprologus_brichardi
ENSCGRG00001012928	Rbm38	57	76.087	ENSMEUG00000005475	-	100	72.464	Notamacropus_eugenii
ENSCGRG00001012928	Rbm38	100	92.469	ENSODEG00000007980	RBM38	100	92.469	Octodon_degus
ENSCGRG00001012928	Rbm38	89	63.913	ENSONIG00000020324	-	92	64.069	Oreochromis_niloticus
ENSCGRG00001012928	Rbm38	89	58.190	ENSONIG00000017073	rbm38	73	65.027	Oreochromis_niloticus
ENSCGRG00001012928	Rbm38	95	75.893	ENSOANG00000009259	RBM38	85	75.893	Ornithorhynchus_anatinus
ENSCGRG00001012928	Rbm38	89	62.069	ENSORLG00000027180	-	92	64.378	Oryzias_latipes
ENSCGRG00001012928	Rbm38	89	55.983	ENSORLG00000012154	rbm38	72	62.295	Oryzias_latipes
ENSCGRG00001012928	Rbm38	89	62.069	ENSORLG00020020751	-	92	64.378	Oryzias_latipes_hni
ENSCGRG00001012928	Rbm38	89	56.838	ENSORLG00020017871	rbm38	72	63.388	Oryzias_latipes_hni
ENSCGRG00001012928	Rbm38	90	58.065	ENSORLG00015012606	rbm38	90	58.065	Oryzias_latipes_hsok
ENSCGRG00001012928	Rbm38	89	61.472	ENSORLG00015017040	-	92	63.362	Oryzias_latipes_hsok
ENSCGRG00001012928	Rbm38	89	60.870	ENSOMEG00000023912	-	72	73.077	Oryzias_melastigma
ENSCGRG00001012928	Rbm38	81	62.051	ENSOMEG00000006805	rbm38	72	63.388	Oryzias_melastigma
ENSCGRG00001012928	Rbm38	100	92.083	ENSOGAG00000029136	RBM38	100	92.083	Otolemur_garnettii
ENSCGRG00001012928	Rbm38	100	90.795	ENSPPRG00000009507	RBM38	100	94.215	Panthera_pardus
ENSCGRG00001012928	Rbm38	88	89.904	ENSPTRG00000013661	RBM38	100	95.041	Pan_troglodytes
ENSCGRG00001012928	Rbm38	54	96.094	ENSPTRG00000045845	-	70	96.094	Pan_troglodytes
ENSCGRG00001012928	Rbm38	100	92.050	ENSPANG00000020919	-	100	95.868	Papio_anubis
ENSCGRG00001012928	Rbm38	98	71.308	ENSPANG00000033127	-	99	71.008	Papio_anubis
ENSCGRG00001012928	Rbm38	96	60.484	ENSPKIG00000025417	rbm38	99	60.484	Paramormyrops_kingsleyae
ENSCGRG00001012928	Rbm38	89	68.182	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSCGRG00001012928	Rbm38	97	75.758	ENSPSIG00000011649	RBM38	97	75.325	Pelodiscus_sinensis
ENSCGRG00001012928	Rbm38	91	55.462	ENSPMGG00000011343	rbm38	74	64.171	Periophthalmus_magnuspinnatus
ENSCGRG00001012928	Rbm38	92	58.577	ENSPMGG00000017094	-	74	68.586	Periophthalmus_magnuspinnatus
ENSCGRG00001012928	Rbm38	100	75.314	ENSPCIG00000013648	RBM38	100	75.314	Phascolarctos_cinereus
ENSCGRG00001012928	Rbm38	89	56.118	ENSPFOG00000011658	rbm38	72	64.674	Poecilia_formosa
ENSCGRG00001012928	Rbm38	89	66.383	ENSPLAG00000002500	-	92	66.383	Poecilia_latipinna
ENSCGRG00001012928	Rbm38	89	55.128	ENSPLAG00000005218	rbm38	72	64.674	Poecilia_latipinna
ENSCGRG00001012928	Rbm38	89	55.983	ENSPMEG00000015770	rbm38	72	64.674	Poecilia_mexicana
ENSCGRG00001012928	Rbm38	89	56.540	ENSPREG00000007398	rbm38	72	65.217	Poecilia_reticulata
ENSCGRG00001012928	Rbm38	100	92.500	ENSPCOG00000026201	RBM38	100	95.082	Propithecus_coquereli
ENSCGRG00001012928	Rbm38	100	63.180	ENSPVAG00000006457	RBM38	100	63.180	Pteropus_vampyrus
ENSCGRG00001012928	Rbm38	100	57.377	ENSPNYG00000021373	rbm38	83	62.000	Pundamilia_nyererei
ENSCGRG00001012928	Rbm38	89	68.349	ENSPNYG00000019727	-	100	88.034	Pundamilia_nyererei
ENSCGRG00001012928	Rbm38	92	65.368	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSCGRG00001012928	Rbm38	85	66.197	ENSPNAG00000010596	rbm38	75	71.429	Pygocentrus_nattereri
ENSCGRG00001012928	Rbm38	100	96.624	ENSRNOG00000006420	Rbm38	100	96.624	Rattus_norvegicus
ENSCGRG00001012928	Rbm38	100	74.895	ENSRROG00000036388	-	100	74.895	Rhinopithecus_roxellana
ENSCGRG00001012928	Rbm38	91	94.444	ENSSBOG00000031053	RBM38	100	98.131	Saimiri_boliviensis_boliviensis
ENSCGRG00001012928	Rbm38	89	66.364	ENSSFOG00015004453	rbm38	92	67.727	Scleropages_formosus
ENSCGRG00001012928	Rbm38	89	64.224	ENSSDUG00000021082	RBM38	72	73.626	Seriola_dumerili
ENSCGRG00001012928	Rbm38	89	59.657	ENSSDUG00000022611	rbm38	72	66.667	Seriola_dumerili
ENSCGRG00001012928	Rbm38	89	64.224	ENSSLDG00000011778	RBM38	72	73.626	Seriola_lalandi_dorsalis
ENSCGRG00001012928	Rbm38	97	60.593	ENSSLDG00000010845	rbm38	97	59.574	Seriola_lalandi_dorsalis
ENSCGRG00001012928	Rbm38	89	66.197	ENSSPAG00000020989	RBM38	91	66.977	Stegastes_partitus
ENSCGRG00001012928	Rbm38	89	58.369	ENSSPAG00000011113	rbm38	72	65.574	Stegastes_partitus
ENSCGRG00001012928	Rbm38	100	91.213	ENSSSCG00000007504	RBM38	100	91.213	Sus_scrofa
ENSCGRG00001012928	Rbm38	89	56.332	ENSTRUG00000024954	rbm38	73	64.481	Takifugu_rubripes
ENSCGRG00001012928	Rbm38	89	65.086	ENSTRUG00000019869	-	92	65.236	Takifugu_rubripes
ENSCGRG00001012928	Rbm38	89	68.326	ENSTNIG00000007093	-	97	67.117	Tetraodon_nigroviridis
ENSCGRG00001012928	Rbm38	50	84.746	ENSTBEG00000001689	-	50	84.746	Tupaia_belangeri
ENSCGRG00001012928	Rbm38	100	91.213	ENSUAMG00000019780	RBM38	100	91.213	Ursus_americanus
ENSCGRG00001012928	Rbm38	100	91.213	ENSVVUG00000017246	RBM38	100	91.213	Vulpes_vulpes
ENSCGRG00001012928	Rbm38	92	72.000	ENSXETG00000011268	rbm38	100	72.889	Xenopus_tropicalis
ENSCGRG00001012928	Rbm38	54	77.444	ENSXCOG00000017324	-	60	77.444	Xiphophorus_couchianus
ENSCGRG00001012928	Rbm38	89	57.203	ENSXMAG00000023662	rbm38	72	65.574	Xiphophorus_maculatus