EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001013163 (Gene tree)
Gene ID: -
Gene Symbol: Rtca
Alias: 2310009A18Rik|Rtcd1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 14828 bases
Position: chrscaffold_15:25014948-25029775
Accession: 1913618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001011542	RTC	PF01137.21	1.6e-47	1	1
ENSCGRP00001011542	RTC_insert	PF05189.13	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001015774	-	948	-	ENSCGRP00001011542	315 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001013163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013163's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013163	Rtca	85	90.706	ENSG00000137996	RTCA	73	90.706	Homo_sapiens
ENSCGRG00001013163	Rtca	85	71.004	ENSAPOG00000001345	rtca	73	71.004	Acanthochromis_polyacanthus
ENSCGRG00001013163	Rtca	85	92.565	ENSAMEG00000008855	RTCA	100	92.565	Ailuropoda_melanoleuca
ENSCGRG00001013163	Rtca	85	72.119	ENSACIG00000019643	rtca	73	72.119	Amphilophus_citrinellus
ENSCGRG00001013163	Rtca	85	71.375	ENSAOCG00000014979	rtca	73	71.375	Amphiprion_ocellaris
ENSCGRG00001013163	Rtca	85	71.375	ENSAPEG00000006945	rtca	73	71.375	Amphiprion_percula
ENSCGRG00001013163	Rtca	85	70.632	ENSATEG00000006315	rtca	74	70.632	Anabas_testudineus
ENSCGRG00001013163	Rtca	85	81.413	ENSAPLG00000015430	RTCA	76	81.413	Anas_platyrhynchos
ENSCGRG00001013163	Rtca	85	91.078	ENSANAG00000025446	RTCA	73	91.078	Aotus_nancymaae
ENSCGRG00001013163	Rtca	85	70.632	ENSACLG00000020770	rtca	73	70.632	Astatotilapia_calliptera
ENSCGRG00001013163	Rtca	85	71.747	ENSAMXG00000043271	rtca	73	71.747	Astyanax_mexicanus
ENSCGRG00001013163	Rtca	85	92.565	ENSBTAG00000006321	RTCA	73	92.565	Bos_taurus
ENSCGRG00001013163	Rtca	85	91.078	ENSCJAG00000003398	RTCA	73	91.078	Callithrix_jacchus
ENSCGRG00001013163	Rtca	85	92.565	ENSCAFG00000020010	RTCA	50	92.565	Canis_familiaris
ENSCGRG00001013163	Rtca	85	92.937	ENSCHIG00000018937	RTCA	73	92.937	Capra_hircus
ENSCGRG00001013163	Rtca	85	91.078	ENSTSYG00000011305	RTCA	73	91.078	Carlito_syrichta
ENSCGRG00001013163	Rtca	85	89.963	ENSCCAG00000021844	RTCA	73	89.963	Cebus_capucinus
ENSCGRG00001013163	Rtca	85	91.450	ENSCATG00000019364	RTCA	87	91.450	Cercocebus_atys
ENSCGRG00001013163	Rtca	85	91.450	ENSCLAG00000006125	RTCA	85	91.450	Chinchilla_lanigera
ENSCGRG00001013163	Rtca	85	91.450	ENSCSAG00000001509	RTCA	73	91.450	Chlorocebus_sabaeus
ENSCGRG00001013163	Rtca	85	92.565	ENSCHOG00000005211	RTCA	73	92.565	Choloepus_hoffmanni
ENSCGRG00001013163	Rtca	85	82.156	ENSCPBG00000026658	RTCA	73	82.156	Chrysemys_picta_bellii
ENSCGRG00001013163	Rtca	85	55.390	ENSCING00000007875	-	73	55.390	Ciona_intestinalis
ENSCGRG00001013163	Rtca	85	54.275	ENSCSAVG00000007269	-	73	54.275	Ciona_savignyi
ENSCGRG00001013163	Rtca	85	91.078	ENSCANG00000040106	RTCA	73	91.078	Colobus_angolensis_palliatus
ENSCGRG00001013163	Rtca	85	69.517	ENSCSEG00000000530	rtca	71	69.517	Cynoglossus_semilaevis
ENSCGRG00001013163	Rtca	72	74.123	ENSCVAG00000021809	rtca	66	74.123	Cyprinodon_variegatus
ENSCGRG00001013163	Rtca	85	72.862	ENSDARG00000002215	rtca	73	72.862	Danio_rerio
ENSCGRG00001013163	Rtca	85	91.450	ENSDNOG00000000456	RTCA	73	91.450	Dasypus_novemcinctus
ENSCGRG00001013163	Rtca	85	95.167	ENSDORG00000005448	Rtca	73	95.167	Dipodomys_ordii
ENSCGRG00001013163	Rtca	84	36.842	FBgn0025630	Rtca	72	36.842	Drosophila_melanogaster
ENSCGRG00001013163	Rtca	80	53.150	ENSEBUG00000008556	rtca	66	53.150	Eptatretus_burgeri
ENSCGRG00001013163	Rtca	85	92.565	ENSEASG00005015926	RTCA	73	92.565	Equus_asinus_asinus
ENSCGRG00001013163	Rtca	85	92.565	ENSECAG00000019831	RTCA	73	92.565	Equus_caballus
ENSCGRG00001013163	Rtca	75	83.475	ENSEEUG00000001165	RTCA	68	83.475	Erinaceus_europaeus
ENSCGRG00001013163	Rtca	85	72.119	ENSELUG00000003741	rtca	74	72.119	Esox_lucius
ENSCGRG00001013163	Rtca	85	92.193	ENSFCAG00000024460	RTCA	73	92.193	Felis_catus
ENSCGRG00001013163	Rtca	77	80.658	ENSFALG00000002443	RTCA	65	80.658	Ficedula_albicollis
ENSCGRG00001013163	Rtca	83	69.434	ENSFDAG00000016084	-	71	69.434	Fukomys_damarensis
ENSCGRG00001013163	Rtca	85	91.450	ENSFDAG00000012070	-	73	91.450	Fukomys_damarensis
ENSCGRG00001013163	Rtca	68	70.233	ENSFHEG00000002868	rtca	90	70.476	Fundulus_heteroclitus
ENSCGRG00001013163	Rtca	85	69.888	ENSGMOG00000013264	rtca	73	69.888	Gadus_morhua
ENSCGRG00001013163	Rtca	85	81.413	ENSGALG00000005277	RTCA	73	81.413	Gallus_gallus
ENSCGRG00001013163	Rtca	85	71.375	ENSGAFG00000011853	rtca	73	71.375	Gambusia_affinis
ENSCGRG00001013163	Rtca	85	69.888	ENSGACG00000013497	rtca	73	69.888	Gasterosteus_aculeatus
ENSCGRG00001013163	Rtca	62	83.673	ENSGAGG00000023306	RTCA	67	83.673	Gopherus_agassizii
ENSCGRG00001013163	Rtca	85	89.591	ENSGGOG00000044018	-	73	89.591	Gorilla_gorilla
ENSCGRG00001013163	Rtca	85	91.450	ENSGGOG00000009546	-	87	91.450	Gorilla_gorilla
ENSCGRG00001013163	Rtca	85	70.632	ENSHBUG00000002114	rtca	73	70.632	Haplochromis_burtoni
ENSCGRG00001013163	Rtca	85	90.335	ENSHGLG00000002617	RTCA	73	90.335	Heterocephalus_glaber_female
ENSCGRG00001013163	Rtca	85	90.335	ENSHGLG00100006056	RTCA	73	90.335	Heterocephalus_glaber_male
ENSCGRG00001013163	Rtca	85	63.941	ENSHCOG00000020628	rtca	65	63.941	Hippocampus_comes
ENSCGRG00001013163	Rtca	85	72.119	ENSIPUG00000024803	rtca	73	72.119	Ictalurus_punctatus
ENSCGRG00001013163	Rtca	85	81.413	ENSSTOG00000033099	-	72	81.413	Ictidomys_tridecemlineatus
ENSCGRG00001013163	Rtca	85	91.822	ENSSTOG00000013528	-	79	91.822	Ictidomys_tridecemlineatus
ENSCGRG00001013163	Rtca	80	64.683	ENSJJAG00000016178	Rtca	73	64.683	Jaculus_jaculus
ENSCGRG00001013163	Rtca	85	73.606	ENSKMAG00000006651	rtca	73	73.606	Kryptolebias_marmoratus
ENSCGRG00001013163	Rtca	85	70.260	ENSLBEG00000002448	-	83	70.260	Labrus_bergylta
ENSCGRG00001013163	Rtca	85	70.260	ENSLBEG00000028971	rtca	74	70.260	Labrus_bergylta
ENSCGRG00001013163	Rtca	70	30.213	ENSLACG00000004594	RCL1	63	30.213	Latimeria_chalumnae
ENSCGRG00001013163	Rtca	85	78.439	ENSLACG00000013666	RTCA	73	78.439	Latimeria_chalumnae
ENSCGRG00001013163	Rtca	85	73.606	ENSLOCG00000000093	rtca	73	73.606	Lepisosteus_oculatus
ENSCGRG00001013163	Rtca	85	90.706	ENSLAFG00000001473	RTCA	73	90.706	Loxodonta_africana
ENSCGRG00001013163	Rtca	85	91.450	ENSMFAG00000034132	RTCA	73	91.450	Macaca_fascicularis
ENSCGRG00001013163	Rtca	85	90.706	ENSMMUG00000019105	RTCA	73	90.706	Macaca_mulatta
ENSCGRG00001013163	Rtca	85	91.450	ENSMNEG00000037163	RTCA	87	91.450	Macaca_nemestrina
ENSCGRG00001013163	Rtca	97	72.876	ENSMLEG00000042151	RTCA	89	72.876	Mandrillus_leucophaeus
ENSCGRG00001013163	Rtca	85	72.491	ENSMAMG00000016536	rtca	73	72.491	Mastacembelus_armatus
ENSCGRG00001013163	Rtca	85	70.632	ENSMZEG00005017945	rtca	73	70.632	Maylandia_zebra
ENSCGRG00001013163	Rtca	85	80.669	ENSMGAG00000006892	RTCA	84	80.669	Meleagris_gallopavo
ENSCGRG00001013163	Rtca	85	98.513	ENSMAUG00000008488	Rtca	73	98.513	Mesocricetus_auratus
ENSCGRG00001013163	Rtca	85	92.565	ENSMICG00000008643	RTCA	87	92.565	Microcebus_murinus
ENSCGRG00001013163	Rtca	85	97.026	ENSMOCG00000016660	Rtca	73	97.026	Microtus_ochrogaster
ENSCGRG00001013163	Rtca	85	73.234	ENSMMOG00000007750	rtca	87	73.234	Mola_mola
ENSCGRG00001013163	Rtca	85	88.104	ENSMODG00000003557	RTCA	73	88.104	Monodelphis_domestica
ENSCGRG00001013163	Rtca	85	73.234	ENSMALG00000020844	rtca	73	73.234	Monopterus_albus
ENSCGRG00001013163	Rtca	85	95.539	MGP_CAROLIEiJ_G0025565	Rtca	100	93.662	Mus_caroli
ENSCGRG00001013163	Rtca	85	94.796	ENSMUSG00000000339	Rtca	100	93.662	Mus_musculus
ENSCGRG00001013163	Rtca	85	95.167	MGP_PahariEiJ_G0027011	Rtca	100	92.958	Mus_pahari
ENSCGRG00001013163	Rtca	85	95.167	MGP_SPRETEiJ_G0026515	Rtca	100	92.958	Mus_spretus
ENSCGRG00001013163	Rtca	85	92.937	ENSMPUG00000012119	RTCA	73	92.937	Mustela_putorius_furo
ENSCGRG00001013163	Rtca	85	88.104	ENSMLUG00000009922	RTCA	73	88.104	Myotis_lucifugus
ENSCGRG00001013163	Rtca	85	95.167	ENSNGAG00000011540	Rtca	78	95.167	Nannospalax_galili
ENSCGRG00001013163	Rtca	85	70.632	ENSNBRG00000003062	rtca	73	70.632	Neolamprologus_brichardi
ENSCGRG00001013163	Rtca	85	90.706	ENSNLEG00000031426	RTCA	73	90.706	Nomascus_leucogenys
ENSCGRG00001013163	Rtca	85	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSCGRG00001013163	Rtca	85	92.193	ENSODEG00000006990	RTCA	74	92.193	Octodon_degus
ENSCGRG00001013163	Rtca	85	70.260	ENSONIG00000007753	rtca	73	70.260	Oreochromis_niloticus
ENSCGRG00001013163	Rtca	85	84.387	ENSOANG00000012055	RTCA	83	84.387	Ornithorhynchus_anatinus
ENSCGRG00001013163	Rtca	85	91.822	ENSOCUG00000014247	RTCA	73	91.822	Oryctolagus_cuniculus
ENSCGRG00001013163	Rtca	85	71.747	ENSORLG00000013605	rtca	73	71.747	Oryzias_latipes
ENSCGRG00001013163	Rtca	85	71.747	ENSORLG00020001904	rtca	73	71.747	Oryzias_latipes_hni
ENSCGRG00001013163	Rtca	85	71.747	ENSORLG00015021064	rtca	73	71.747	Oryzias_latipes_hsok
ENSCGRG00001013163	Rtca	85	72.491	ENSOMEG00000000756	rtca	73	72.491	Oryzias_melastigma
ENSCGRG00001013163	Rtca	89	88.929	ENSOGAG00000005627	RTCA	76	88.929	Otolemur_garnettii
ENSCGRG00001013163	Rtca	85	92.193	ENSOARG00000018122	RTCA	84	92.193	Ovis_aries
ENSCGRG00001013163	Rtca	85	91.450	ENSPPAG00000035119	RTCA	87	91.450	Pan_paniscus
ENSCGRG00001013163	Rtca	85	91.822	ENSPPRG00000000350	RTCA	73	91.822	Panthera_pardus
ENSCGRG00001013163	Rtca	85	91.822	ENSPTIG00000012816	RTCA	73	91.822	Panthera_tigris_altaica
ENSCGRG00001013163	Rtca	85	90.706	ENSPTRG00000001004	RTCA	87	90.706	Pan_troglodytes
ENSCGRG00001013163	Rtca	85	91.822	ENSPANG00000000346	RTCA	73	91.822	Papio_anubis
ENSCGRG00001013163	Rtca	85	73.978	ENSPKIG00000001653	rtca	73	73.978	Paramormyrops_kingsleyae
ENSCGRG00001013163	Rtca	85	82.900	ENSPSIG00000011408	RTCA	73	82.900	Pelodiscus_sinensis
ENSCGRG00001013163	Rtca	85	97.398	ENSPEMG00000018582	Rtca	73	97.398	Peromyscus_maniculatus_bairdii
ENSCGRG00001013163	Rtca	85	56.296	ENSPMAG00000009110	rtca	73	56.296	Petromyzon_marinus
ENSCGRG00001013163	Rtca	85	87.732	ENSPCIG00000007684	RTCA	73	87.732	Phascolarctos_cinereus
ENSCGRG00001013163	Rtca	85	72.119	ENSPFOG00000004824	rtca	73	72.119	Poecilia_formosa
ENSCGRG00001013163	Rtca	85	72.119	ENSPLAG00000011753	rtca	73	72.119	Poecilia_latipinna
ENSCGRG00001013163	Rtca	85	72.119	ENSPMEG00000020469	rtca	73	72.119	Poecilia_mexicana
ENSCGRG00001013163	Rtca	85	73.234	ENSPREG00000001365	rtca	73	73.234	Poecilia_reticulata
ENSCGRG00001013163	Rtca	85	90.706	ENSPPYG00000001115	RTCA	73	90.706	Pongo_abelii
ENSCGRG00001013163	Rtca	85	86.245	ENSPCAG00000005076	RTCA	73	86.245	Procavia_capensis
ENSCGRG00001013163	Rtca	85	92.565	ENSPCOG00000005603	RTCA	73	92.565	Propithecus_coquereli
ENSCGRG00001013163	Rtca	85	90.706	ENSPVAG00000009478	RTCA	71	90.706	Pteropus_vampyrus
ENSCGRG00001013163	Rtca	85	70.632	ENSPNYG00000004722	rtca	73	70.632	Pundamilia_nyererei
ENSCGRG00001013163	Rtca	85	73.234	ENSPNAG00000022270	rtca	73	73.234	Pygocentrus_nattereri
ENSCGRG00001013163	Rtca	85	95.167	ENSRNOG00000014575	Rtca	73	95.167	Rattus_norvegicus
ENSCGRG00001013163	Rtca	85	90.335	ENSRBIG00000041180	RTCA	87	90.335	Rhinopithecus_bieti
ENSCGRG00001013163	Rtca	85	90.335	ENSRROG00000024929	RTCA	73	90.335	Rhinopithecus_roxellana
ENSCGRG00001013163	Rtca	85	91.078	ENSSBOG00000028626	RTCA	73	91.078	Saimiri_boliviensis_boliviensis
ENSCGRG00001013163	Rtca	85	87.732	ENSSHAG00000001758	RTCA	73	87.732	Sarcophilus_harrisii
ENSCGRG00001013163	Rtca	85	69.517	ENSSMAG00000014680	rtca	72	69.517	Scophthalmus_maximus
ENSCGRG00001013163	Rtca	85	71.004	ENSSDUG00000015585	rtca	72	71.004	Seriola_dumerili
ENSCGRG00001013163	Rtca	85	70.632	ENSSLDG00000018985	rtca	73	70.632	Seriola_lalandi_dorsalis
ENSCGRG00001013163	Rtca	85	83.643	ENSSARG00000013993	RTCA	85	83.643	Sorex_araneus
ENSCGRG00001013163	Rtca	50	77.707	ENSSPUG00000016255	-	100	77.707	Sphenodon_punctatus
ENSCGRG00001013163	Rtca	85	70.260	ENSSPAG00000011938	rtca	73	70.260	Stegastes_partitus
ENSCGRG00001013163	Rtca	85	94.052	ENSSSCG00000006865	RTCA	73	94.052	Sus_scrofa
ENSCGRG00001013163	Rtca	85	81.413	ENSTGUG00000005154	RTCA	73	81.413	Taeniopygia_guttata
ENSCGRG00001013163	Rtca	85	72.119	ENSTRUG00000008799	rtca	73	72.119	Takifugu_rubripes
ENSCGRG00001013163	Rtca	85	72.491	ENSTNIG00000004725	rtca	73	72.491	Tetraodon_nigroviridis
ENSCGRG00001013163	Rtca	85	92.193	ENSTTRG00000015327	RTCA	71	92.193	Tursiops_truncatus
ENSCGRG00001013163	Rtca	77	90.164	ENSUAMG00000017265	RTCA	69	90.164	Ursus_americanus
ENSCGRG00001013163	Rtca	85	92.193	ENSUMAG00000007881	RTCA	73	92.193	Ursus_maritimus
ENSCGRG00001013163	Rtca	85	81.041	ENSVPAG00000001039	RTCA	71	81.041	Vicugna_pacos
ENSCGRG00001013163	Rtca	85	92.193	ENSVVUG00000022041	RTCA	50	92.193	Vulpes_vulpes
ENSCGRG00001013163	Rtca	84	62.593	ENSXETG00000031661	RTCA	73	62.593	Xenopus_tropicalis
ENSCGRG00001013163	Rtca	85	59.480	ENSXCOG00000008002	rtca	72	59.480	Xiphophorus_couchianus
ENSCGRG00001013163	Rtca	85	71.747	ENSXMAG00000005482	rtca	73	71.747	Xiphophorus_maculatus