EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001013330 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 360483 bases
Position: chrscaffold_12:22531290-22891772
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001011768	RRM_1	PF00076.22	3.5e-34	1	2
ENSCGRP00001011768	RRM_1	PF00076.22	3.5e-34	2	2
ENSCGRP00001011788	RRM_1	PF00076.22	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016021	-	432	-	ENSCGRP00001011788	143 (aa)	-	-
ENSCGRT00001016001	-	1216	-	ENSCGRP00001011768	329 (aa)	-	UPI000359738F

Gene Model

Click here to download ENSCGRG00001013330's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013330's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001013330	Msi2	96	70.571	ENSCGRG00001018883	Msi1	96	69.143
ENSCGRG00001013330	Msi2	51	39.726	ENSCGRG00001010684	-	53	33.133
ENSCGRG00001013330	Msi2	75	52.000	ENSCGRG00001005044	Hnrnpab	72	52.000
ENSCGRG00001013330	Msi2	58	43.373	ENSCGRG00001015633	-	54	43.373
ENSCGRG00001013330	Msi2	78	51.064	ENSCGRG00001021763	Cirbp	50	51.064
ENSCGRG00001013330	Msi2	58	48.780	ENSCGRG00001010070	-	62	33.679
ENSCGRG00001013330	Msi2	66	50.000	ENSCGRG00001013129	-	60	50.000
ENSCGRG00001013330	Msi2	59	45.556	ENSCGRG00001000079	-	66	39.429
ENSCGRG00001013330	Msi2	61	46.237	ENSCGRG00001000392	-	51	48.193
ENSCGRG00001013330	Msi2	66	34.653	ENSCGRG00001000811	-	57	33.333
ENSCGRG00001013330	Msi2	51	43.243	ENSCGRG00001018909	Rbm3	82	43.243
ENSCGRG00001013330	Msi2	62	33.684	ENSCGRG00001000756	-	62	34.118
ENSCGRG00001013330	Msi2	77	48.193	ENSCGRG00001022416	-	57	48.193
ENSCGRG00001013330	Msi2	58	48.864	ENSCGRG00001008592	Hnrnpa3	64	48.864
ENSCGRG00001013330	Msi2	68	54.255	ENSCGRG00001014634	Hnrnpd	67	54.255
ENSCGRG00001013330	Msi2	58	48.864	ENSCGRG00001018034	-	59	51.282
ENSCGRG00001013330	Msi2	64	58.427	ENSCGRG00001010960	Hnrnpdl	60	62.667
ENSCGRG00001013330	Msi2	55	43.590	ENSCGRG00001005548	Hnrnpa0	62	41.489
ENSCGRG00001013330	Msi2	58	32.530	ENSCGRG00001024068	Slirp	82	32.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013330	Msi2	100	99.392	ENSG00000153944	MSI2	100	99.392	Homo_sapiens
ENSCGRG00001013330	Msi2	97	92.829	ENSAPOG00000001658	msi2a	100	87.538	Acanthochromis_polyacanthus
ENSCGRG00001013330	Msi2	94	94.172	ENSAMEG00000002697	MSI2	99	94.172	Ailuropoda_melanoleuca
ENSCGRG00001013330	Msi2	100	70.663	ENSACIG00000009475	msi2a	100	70.663	Amphilophus_citrinellus
ENSCGRG00001013330	Msi2	79	70.796	ENSAOCG00000014822	msi2a	69	76.000	Amphiprion_ocellaris
ENSCGRG00001013330	Msi2	100	87.538	ENSAPEG00000007706	msi2a	100	87.538	Amphiprion_percula
ENSCGRG00001013330	Msi2	97	92.829	ENSATEG00000010498	msi2a	100	87.538	Anabas_testudineus
ENSCGRG00001013330	Msi2	94	92.832	ENSATEG00000003301	-	100	92.832	Anabas_testudineus
ENSCGRG00001013330	Msi2	94	94.811	ENSACAG00000005452	MSI2	71	94.811	Anolis_carolinensis
ENSCGRG00001013330	Msi2	100	99.392	ENSANAG00000037827	MSI2	100	99.392	Aotus_nancymaae
ENSCGRG00001013330	Msi2	97	92.430	ENSACLG00000007752	msi2a	100	87.234	Astatotilapia_calliptera
ENSCGRG00001013330	Msi2	100	93.030	ENSAMXG00000032796	msi2a	100	91.212	Astyanax_mexicanus
ENSCGRG00001013330	Msi2	100	90.274	ENSAMXG00000010474	msi2b	95	95.779	Astyanax_mexicanus
ENSCGRG00001013330	Msi2	94	99.351	ENSBTAG00000004406	MSI2	97	99.351	Bos_taurus
ENSCGRG00001013330	Msi2	79	60.177	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSCGRG00001013330	Msi2	100	99.392	ENSCJAG00000013998	MSI2	100	99.392	Callithrix_jacchus
ENSCGRG00001013330	Msi2	94	92.812	ENSCAFG00020025620	MSI2	81	92.812	Canis_lupus_dingo
ENSCGRG00001013330	Msi2	100	98.480	ENSCHIG00000016580	MSI2	100	98.480	Capra_hircus
ENSCGRG00001013330	Msi2	94	95.053	ENSCPOG00000034042	MSI2	99	95.053	Cavia_porcellus
ENSCGRG00001013330	Msi2	100	99.392	ENSCCAG00000033927	MSI2	100	99.392	Cebus_capucinus
ENSCGRG00001013330	Msi2	100	98.176	ENSCATG00000040879	MSI2	100	98.176	Cercocebus_atys
ENSCGRG00001013330	Msi2	100	94.236	ENSCLAG00000014325	MSI2	100	94.236	Chinchilla_lanigera
ENSCGRG00001013330	Msi2	100	99.392	ENSCSAG00000005633	MSI2	100	99.392	Chlorocebus_sabaeus
ENSCGRG00001013330	Msi2	90	69.751	ENSCHOG00000008660	MSI2	100	69.751	Choloepus_hoffmanni
ENSCGRG00001013330	Msi2	94	99.015	ENSCPBG00000009942	MSI2	95	91.418	Chrysemys_picta_bellii
ENSCGRG00001013330	Msi2	63	72.000	ENSCING00000018579	-	97	53.333	Ciona_intestinalis
ENSCGRG00001013330	Msi2	65	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSCGRG00001013330	Msi2	94	99.115	ENSCANG00000036414	MSI2	100	94.154	Colobus_angolensis_palliatus
ENSCGRG00001013330	Msi2	94	94.479	ENSCGRG00000003141	Msi2	100	94.479	Cricetulus_griseus_crigri
ENSCGRG00001013330	Msi2	78	74.872	ENSCSEG00000013557	msi2a	83	73.333	Cynoglossus_semilaevis
ENSCGRG00001013330	Msi2	74	86.792	ENSCSEG00000013549	msi2a	100	73.370	Cynoglossus_semilaevis
ENSCGRG00001013330	Msi2	100	79.331	ENSCSEG00000003266	-	100	79.331	Cynoglossus_semilaevis
ENSCGRG00001013330	Msi2	100	85.714	ENSCVAG00000017075	msi2a	100	86.782	Cyprinodon_variegatus
ENSCGRG00001013330	Msi2	100	76.546	ENSDARG00000033901	msi2a	100	76.864	Danio_rerio
ENSCGRG00001013330	Msi2	92	93.443	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSCGRG00001013330	Msi2	94	99.654	ENSDNOG00000014501	MSI2	100	99.654	Dasypus_novemcinctus
ENSCGRG00001013330	Msi2	78	88.384	ENSDORG00000005394	Msi2	84	87.374	Dipodomys_ordii
ENSCGRG00001013330	Msi2	59	97.619	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSCGRG00001013330	Msi2	87	72.632	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSCGRG00001013330	Msi2	67	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCGRG00001013330	Msi2	88	66.026	ENSEBUG00000006732	msi2a	87	64.423	Eptatretus_burgeri
ENSCGRG00001013330	Msi2	94	95.484	ENSEASG00005002965	MSI2	97	87.179	Equus_asinus_asinus
ENSCGRG00001013330	Msi2	94	98.268	ENSECAG00000011435	MSI2	100	91.831	Equus_caballus
ENSCGRG00001013330	Msi2	82	85.039	ENSEEUG00000007810	MSI2	100	85.039	Erinaceus_europaeus
ENSCGRG00001013330	Msi2	100	88.754	ENSELUG00000011747	msi2a	100	88.754	Esox_lucius
ENSCGRG00001013330	Msi2	100	83.191	ENSELUG00000001361	msi2b	100	83.191	Esox_lucius
ENSCGRG00001013330	Msi2	100	99.392	ENSFCAG00000041686	MSI2	100	99.392	Felis_catus
ENSCGRG00001013330	Msi2	74	78.302	ENSFCAG00000033787	-	92	71.930	Felis_catus
ENSCGRG00001013330	Msi2	94	94.172	ENSFDAG00000016118	MSI2	100	94.172	Fukomys_damarensis
ENSCGRG00001013330	Msi2	97	92.829	ENSFHEG00000000084	msi2a	96	92.763	Fundulus_heteroclitus
ENSCGRG00001013330	Msi2	73	92.308	ENSGMOG00000007596	-	100	92.308	Gadus_morhua
ENSCGRG00001013330	Msi2	100	90.778	ENSGALG00000005567	MSI2	100	90.778	Gallus_gallus
ENSCGRG00001013330	Msi2	96	79.439	ENSGAFG00000006974	msi2a	90	93.377	Gambusia_affinis
ENSCGRG00001013330	Msi2	100	92.075	ENSGAGG00000016542	MSI2	100	89.836	Gopherus_agassizii
ENSCGRG00001013330	Msi2	94	99.115	ENSGGOG00000013182	MSI2	100	94.154	Gorilla_gorilla
ENSCGRG00001013330	Msi2	97	92.430	ENSHBUG00000020800	msi2a	100	87.234	Haplochromis_burtoni
ENSCGRG00001013330	Msi2	100	85.303	ENSHGLG00000012444	MSI2	100	85.303	Heterocephalus_glaber_female
ENSCGRG00001013330	Msi2	75	90.865	ENSHGLG00100003744	MSI2	100	90.865	Heterocephalus_glaber_male
ENSCGRG00001013330	Msi2	59	97.619	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSCGRG00001013330	Msi2	95	81.061	ENSHCOG00000017241	-	71	81.557	Hippocampus_comes
ENSCGRG00001013330	Msi2	97	92.430	ENSHCOG00000000266	msi2a	97	84.366	Hippocampus_comes
ENSCGRG00001013330	Msi2	96	93.987	ENSIPUG00000003732	msi2b	100	86.018	Ictalurus_punctatus
ENSCGRG00001013330	Msi2	95	93.443	ENSIPUG00000021097	msi2a	100	86.626	Ictalurus_punctatus
ENSCGRG00001013330	Msi2	94	95.053	ENSSTOG00000007884	MSI2	99	95.053	Ictidomys_tridecemlineatus
ENSCGRG00001013330	Msi2	75	85.500	ENSJJAG00000006292	-	100	85.000	Jaculus_jaculus
ENSCGRG00001013330	Msi2	59	97.619	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSCGRG00001013330	Msi2	96	90.823	ENSKMAG00000009494	msi2a	96	91.111	Kryptolebias_marmoratus
ENSCGRG00001013330	Msi2	97	92.829	ENSLBEG00000007061	msi2a	100	87.538	Labrus_bergylta
ENSCGRG00001013330	Msi2	94	64.620	ENSLBEG00000026223	-	83	85.514	Labrus_bergylta
ENSCGRG00001013330	Msi2	64	92.308	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSCGRG00001013330	Msi2	100	79.124	ENSLOCG00000004675	msi2b	100	83.740	Lepisosteus_oculatus
ENSCGRG00001013330	Msi2	94	99.115	ENSMFAG00000003775	MSI2	100	94.154	Macaca_fascicularis
ENSCGRG00001013330	Msi2	94	99.115	ENSMMUG00000002069	MSI2	100	94.154	Macaca_mulatta
ENSCGRG00001013330	Msi2	100	99.392	ENSMNEG00000045275	MSI2	100	99.392	Macaca_nemestrina
ENSCGRG00001013330	Msi2	94	99.115	ENSMLEG00000033888	MSI2	100	94.154	Mandrillus_leucophaeus
ENSCGRG00001013330	Msi2	97	92.430	ENSMAMG00000002488	-	99	92.053	Mastacembelus_armatus
ENSCGRG00001013330	Msi2	97	92.829	ENSMAMG00000010503	msi2a	100	86.018	Mastacembelus_armatus
ENSCGRG00001013330	Msi2	100	91.793	ENSMZEG00005007676	msi2a	100	91.793	Maylandia_zebra
ENSCGRG00001013330	Msi2	100	94.813	ENSMAUG00000003862	Msi2	100	94.813	Mesocricetus_auratus
ENSCGRG00001013330	Msi2	100	78.144	ENSMICG00000032913	-	100	79.042	Microcebus_murinus
ENSCGRG00001013330	Msi2	100	99.392	ENSMICG00000013598	-	100	99.392	Microcebus_murinus
ENSCGRG00001013330	Msi2	100	94.524	ENSMOCG00000005820	Msi2	100	94.524	Microtus_ochrogaster
ENSCGRG00001013330	Msi2	90	84.407	ENSMMOG00000008348	msi2a	91	84.591	Mola_mola
ENSCGRG00001013330	Msi2	75	89.423	ENSMODG00000014790	MSI2	100	89.423	Monodelphis_domestica
ENSCGRG00001013330	Msi2	100	86.018	ENSMALG00000000071	msi2a	100	92.810	Monopterus_albus
ENSCGRG00001013330	Msi2	100	99.696	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSCGRG00001013330	Msi2	100	99.696	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSCGRG00001013330	Msi2	100	99.696	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSCGRG00001013330	Msi2	100	99.696	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSCGRG00001013330	Msi2	94	99.675	ENSMPUG00000015377	MSI2	97	99.675	Mustela_putorius_furo
ENSCGRG00001013330	Msi2	94	99.351	ENSMLUG00000007865	MSI2	97	99.351	Myotis_lucifugus
ENSCGRG00001013330	Msi2	100	94.524	ENSNGAG00000017807	Msi2	100	94.524	Nannospalax_galili
ENSCGRG00001013330	Msi2	100	87.234	ENSNBRG00000014596	msi2a	100	87.234	Neolamprologus_brichardi
ENSCGRG00001013330	Msi2	94	99.115	ENSNLEG00000008059	MSI2	95	99.043	Nomascus_leucogenys
ENSCGRG00001013330	Msi2	67	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCGRG00001013330	Msi2	100	94.236	ENSODEG00000011974	MSI2	100	94.236	Octodon_degus
ENSCGRG00001013330	Msi2	74	89.623	ENSONIG00000001972	msi2a	84	93.377	Oreochromis_niloticus
ENSCGRG00001013330	Msi2	92	95.745	ENSOANG00000005667	MSI2	72	95.745	Ornithorhynchus_anatinus
ENSCGRG00001013330	Msi2	94	99.675	ENSOCUG00000010440	MSI2	97	99.675	Oryctolagus_cuniculus
ENSCGRG00001013330	Msi2	96	91.772	ENSORLG00000009671	msi2a	95	92.063	Oryzias_latipes
ENSCGRG00001013330	Msi2	97	92.829	ENSORLG00020021556	msi2a	94	92.833	Oryzias_latipes_hni
ENSCGRG00001013330	Msi2	96	91.772	ENSORLG00015004592	msi2a	95	92.063	Oryzias_latipes_hsok
ENSCGRG00001013330	Msi2	100	86.018	ENSOMEG00000000146	msi2a	98	91.391	Oryzias_melastigma
ENSCGRG00001013330	Msi2	94	95.130	ENSOGAG00000005621	MSI2	99	95.130	Otolemur_garnettii
ENSCGRG00001013330	Msi2	94	94.154	ENSPPAG00000037697	MSI2	100	94.154	Pan_paniscus
ENSCGRG00001013330	Msi2	94	99.675	ENSPPRG00000001848	MSI2	94	99.675	Panthera_pardus
ENSCGRG00001013330	Msi2	74	78.512	ENSPTIG00000021873	-	92	78.512	Panthera_tigris_altaica
ENSCGRG00001013330	Msi2	94	93.910	ENSPTIG00000021678	MSI2	96	93.910	Panthera_tigris_altaica
ENSCGRG00001013330	Msi2	94	99.115	ENSPTRG00000009437	MSI2	100	94.154	Pan_troglodytes
ENSCGRG00001013330	Msi2	100	99.392	ENSPANG00000022319	MSI2	100	99.392	Papio_anubis
ENSCGRG00001013330	Msi2	64	91.209	ENSPKIG00000017107	-	81	91.209	Paramormyrops_kingsleyae
ENSCGRG00001013330	Msi2	96	89.557	ENSPKIG00000007038	-	96	85.498	Paramormyrops_kingsleyae
ENSCGRG00001013330	Msi2	100	97.727	ENSPSIG00000008618	MSI2	83	97.727	Pelodiscus_sinensis
ENSCGRG00001013330	Msi2	100	86.930	ENSPMGG00000005888	msi2a	100	86.930	Periophthalmus_magnuspinnatus
ENSCGRG00001013330	Msi2	59	97.619	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001013330	Msi2	100	89.859	ENSPCIG00000006063	MSI2	100	89.859	Phascolarctos_cinereus
ENSCGRG00001013330	Msi2	73	91.429	ENSPFOG00000019337	MSI2	92	90.476	Poecilia_formosa
ENSCGRG00001013330	Msi2	74	89.623	ENSPLAG00000000436	msi2a	76	90.141	Poecilia_latipinna
ENSCGRG00001013330	Msi2	74	75.472	ENSPMEG00000013247	msi2a	80	79.021	Poecilia_mexicana
ENSCGRG00001013330	Msi2	97	92.829	ENSPREG00000000881	msi2a	99	85.106	Poecilia_reticulata
ENSCGRG00001013330	Msi2	94	96.234	ENSPPYG00000008244	-	100	96.234	Pongo_abelii
ENSCGRG00001013330	Msi2	73	70.293	ENSPCAG00000010552	MSI2	100	70.293	Procavia_capensis
ENSCGRG00001013330	Msi2	64	90.217	ENSPCOG00000019195	-	93	99.237	Propithecus_coquereli
ENSCGRG00001013330	Msi2	94	90.476	ENSPVAG00000017053	MSI2	100	90.476	Pteropus_vampyrus
ENSCGRG00001013330	Msi2	100	91.793	ENSPNYG00000018393	msi2a	100	91.793	Pundamilia_nyererei
ENSCGRG00001013330	Msi2	100	89.697	ENSPNAG00000000844	msi2b	100	88.182	Pygocentrus_nattereri
ENSCGRG00001013330	Msi2	100	93.030	ENSPNAG00000014957	msi2a	100	91.515	Pygocentrus_nattereri
ENSCGRG00001013330	Msi2	94	99.642	ENSRNOG00000025338	Msi2	100	99.642	Rattus_norvegicus
ENSCGRG00001013330	Msi2	64	81.319	ENSRBIG00000032064	-	84	81.319	Rhinopithecus_bieti
ENSCGRG00001013330	Msi2	64	90.217	ENSRROG00000034421	-	92	99.130	Rhinopithecus_roxellana
ENSCGRG00001013330	Msi2	94	99.556	ENSSBOG00000026425	MSI2	100	94.154	Saimiri_boliviensis_boliviensis
ENSCGRG00001013330	Msi2	94	92.923	ENSSHAG00000008672	MSI2	100	92.923	Sarcophilus_harrisii
ENSCGRG00001013330	Msi2	96	82.041	ENSSFOG00015012168	msi2b	76	82.041	Scleropages_formosus
ENSCGRG00001013330	Msi2	94	89.286	ENSSFOG00015021687	-	97	87.662	Scleropages_formosus
ENSCGRG00001013330	Msi2	97	92.829	ENSSMAG00000018484	msi2a	100	87.538	Scophthalmus_maximus
ENSCGRG00001013330	Msi2	100	83.186	ENSSDUG00000021968	-	99	91.391	Seriola_dumerili
ENSCGRG00001013330	Msi2	97	92.829	ENSSDUG00000014507	msi2a	100	87.538	Seriola_dumerili
ENSCGRG00001013330	Msi2	97	92.829	ENSSLDG00000017172	msi2a	100	87.538	Seriola_lalandi_dorsalis
ENSCGRG00001013330	Msi2	64	74.725	ENSSLDG00000021332	-	68	74.725	Seriola_lalandi_dorsalis
ENSCGRG00001013330	Msi2	74	92.453	ENSSPUG00000000913	-	94	93.671	Sphenodon_punctatus
ENSCGRG00001013330	Msi2	97	92.829	ENSSPAG00000017793	msi2a	96	85.443	Stegastes_partitus
ENSCGRG00001013330	Msi2	100	99.392	ENSSSCG00000038505	MSI2	100	99.392	Sus_scrofa
ENSCGRG00001013330	Msi2	75	89.904	ENSTGUG00000008452	MSI2	100	89.904	Taeniopygia_guttata
ENSCGRG00001013330	Msi2	100	86.310	ENSTRUG00000021248	msi2a	100	86.310	Takifugu_rubripes
ENSCGRG00001013330	Msi2	74	82.231	ENSTBEG00000001241	MSI2	73	82.231	Tupaia_belangeri
ENSCGRG00001013330	Msi2	94	90.377	ENSTTRG00000002189	MSI2	100	90.377	Tursiops_truncatus
ENSCGRG00001013330	Msi2	94	99.675	ENSUAMG00000000700	MSI2	97	99.675	Ursus_americanus
ENSCGRG00001013330	Msi2	90	91.729	ENSUMAG00000000505	MSI2	95	91.729	Ursus_maritimus
ENSCGRG00001013330	Msi2	64	88.462	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSCGRG00001013330	Msi2	100	98.344	ENSVVUG00000011783	MSI2	100	98.344	Vulpes_vulpes
ENSCGRG00001013330	Msi2	96	86.154	ENSXCOG00000006113	msi2a	89	86.154	Xiphophorus_couchianus
ENSCGRG00001013330	Msi2	97	92.829	ENSXMAG00000000608	msi2a	100	86.782	Xiphophorus_maculatus