EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001013548 (Gene tree)
Gene ID: -
Gene Symbol: Srp72
Alias: 5730576P14Rik|72kDa
Full Name: signal recognition particle 72
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 22204 bases
Position: chrscaffold_13:44034689-44056892
Accession: 100760440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012084	SRP72	PF08492.12	3.6e-22	1	1
ENSCGRP00001012077	SRP72	PF08492.12	4.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016310	-	2016	-	ENSCGRP00001012077	671 (aa)	XP_007633074	A0A061IR05
ENSCGRT00001016317	-	1833	-	ENSCGRP00001012084	610 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001013548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013548	Srp72	100	97.466	ENSG00000174780	SRP72	100	97.466	Homo_sapiens
ENSCGRG00001013548	Srp72	99	76.151	ENSAPOG00000019438	srp72	99	76.151	Acanthochromis_polyacanthus
ENSCGRG00001013548	Srp72	100	97.168	ENSAMEG00000008469	SRP72	99	97.168	Ailuropoda_melanoleuca
ENSCGRG00001013548	Srp72	99	76.269	ENSACIG00000000488	srp72	99	76.269	Amphilophus_citrinellus
ENSCGRG00001013548	Srp72	100	76.453	ENSAOCG00000011256	srp72	100	76.453	Amphiprion_ocellaris
ENSCGRG00001013548	Srp72	100	76.453	ENSAPEG00000001512	srp72	100	76.453	Amphiprion_percula
ENSCGRG00001013548	Srp72	99	72.533	ENSATEG00000006781	srp72	99	77.850	Anabas_testudineus
ENSCGRG00001013548	Srp72	98	84.394	ENSAPLG00000008751	SRP72	98	84.091	Anas_platyrhynchos
ENSCGRG00001013548	Srp72	99	85.520	ENSACAG00000002381	SRP72	99	84.948	Anolis_carolinensis
ENSCGRG00001013548	Srp72	100	96.393	ENSANAG00000020836	-	100	96.393	Aotus_nancymaae
ENSCGRG00001013548	Srp72	99	76.946	ENSACLG00000014617	srp72	99	76.946	Astatotilapia_calliptera
ENSCGRG00001013548	Srp72	99	76.831	ENSAMXG00000004011	srp72	99	76.682	Astyanax_mexicanus
ENSCGRG00001013548	Srp72	100	97.317	ENSBTAG00000010593	SRP72	100	97.317	Bos_taurus
ENSCGRG00001013548	Srp72	98	96.183	ENSCJAG00000017998	SRP72	100	96.125	Callithrix_jacchus
ENSCGRG00001013548	Srp72	100	97.615	ENSCAFG00000002244	SRP72	100	97.615	Canis_familiaris
ENSCGRG00001013548	Srp72	100	97.541	ENSCAFG00020027338	SRP72	100	97.541	Canis_lupus_dingo
ENSCGRG00001013548	Srp72	98	94.977	ENSCHIG00000021465	SRP72	100	94.948	Capra_hircus
ENSCGRG00001013548	Srp72	99	97.015	ENSTSYG00000010571	-	99	97.015	Carlito_syrichta
ENSCGRG00001013548	Srp72	71	97.938	ENSCAPG00000016668	SRP72	100	83.268	Cavia_aperea
ENSCGRG00001013548	Srp72	100	97.019	ENSCPOG00000000218	SRP72	100	97.019	Cavia_porcellus
ENSCGRG00001013548	Srp72	95	96.238	ENSCCAG00000030683	-	95	96.238	Cebus_capucinus
ENSCGRG00001013548	Srp72	98	94.198	ENSCCAG00000030830	-	100	94.188	Cebus_capucinus
ENSCGRG00001013548	Srp72	100	97.317	ENSCATG00000008072	SRP72	100	97.317	Cercocebus_atys
ENSCGRG00001013548	Srp72	97	77.301	ENSCATG00000045359	-	95	77.196	Cercocebus_atys
ENSCGRG00001013548	Srp72	100	97.213	ENSCLAG00000003571	SRP72	100	97.213	Chinchilla_lanigera
ENSCGRG00001013548	Srp72	100	91.505	ENSCSAG00000005079	SRP72	100	91.505	Chlorocebus_sabaeus
ENSCGRG00001013548	Srp72	90	99.153	ENSCHOG00000013240	SRP72	90	99.153	Choloepus_hoffmanni
ENSCGRG00001013548	Srp72	96	86.470	ENSCPBG00000015015	SRP72	100	85.714	Chrysemys_picta_bellii
ENSCGRG00001013548	Srp72	94	41.337	ENSCING00000002417	-	98	41.520	Ciona_intestinalis
ENSCGRG00001013548	Srp72	94	41.590	ENSCSAVG00000011288	-	99	41.074	Ciona_savignyi
ENSCGRG00001013548	Srp72	100	97.317	ENSCANG00000041709	SRP72	100	97.317	Colobus_angolensis_palliatus
ENSCGRG00001013548	Srp72	90	78.838	ENSCANG00000037920	-	98	79.237	Colobus_angolensis_palliatus
ENSCGRG00001013548	Srp72	94	100.000	ENSCGRG00000003013	Srp72	99	100.000	Cricetulus_griseus_crigri
ENSCGRG00001013548	Srp72	99	77.280	ENSCSEG00000003616	srp72	99	76.796	Cynoglossus_semilaevis
ENSCGRG00001013548	Srp72	91	77.504	ENSCVAG00000001520	srp72	99	77.504	Cyprinodon_variegatus
ENSCGRG00001013548	Srp72	85	77.018	ENSDARG00000014139	srp72	99	76.263	Danio_rerio
ENSCGRG00001013548	Srp72	100	91.233	ENSDNOG00000039012	SRP72	83	91.530	Dasypus_novemcinctus
ENSCGRG00001013548	Srp72	96	96.279	ENSDORG00000000171	Srp72	99	95.821	Dipodomys_ordii
ENSCGRG00001013548	Srp72	92	41.026	FBgn0038810	Srp72	94	41.506	Drosophila_melanogaster
ENSCGRG00001013548	Srp72	96	95.807	ENSETEG00000005191	SRP72	100	95.685	Echinops_telfairi
ENSCGRG00001013548	Srp72	73	61.382	ENSEBUG00000003696	srp72	96	61.633	Eptatretus_burgeri
ENSCGRG00001013548	Srp72	100	97.168	ENSEASG00005017747	SRP72	100	97.168	Equus_asinus_asinus
ENSCGRG00001013548	Srp72	100	97.019	ENSECAG00000006920	SRP72	100	97.019	Equus_caballus
ENSCGRG00001013548	Srp72	99	75.744	ENSELUG00000022415	srp72	100	75.495	Esox_lucius
ENSCGRG00001013548	Srp72	100	96.875	ENSFCAG00000027600	SRP72	100	96.875	Felis_catus
ENSCGRG00001013548	Srp72	96	86.335	ENSFALG00000006713	SRP72	99	85.075	Ficedula_albicollis
ENSCGRG00001013548	Srp72	100	96.274	ENSFDAG00000002014	-	100	96.274	Fukomys_damarensis
ENSCGRG00001013548	Srp72	97	65.936	ENSFDAG00000009793	-	95	64.250	Fukomys_damarensis
ENSCGRG00001013548	Srp72	99	75.446	ENSFHEG00000017652	srp72	93	76.190	Fundulus_heteroclitus
ENSCGRG00001013548	Srp72	97	73.344	ENSGMOG00000005986	srp72	99	73.244	Gadus_morhua
ENSCGRG00001013548	Srp72	96	86.760	ENSGALG00000011403	SRP72	100	85.565	Gallus_gallus
ENSCGRG00001013548	Srp72	99	76.383	ENSGAFG00000017762	srp72	99	76.532	Gambusia_affinis
ENSCGRG00001013548	Srp72	99	74.851	ENSGACG00000016749	srp72	99	75.595	Gasterosteus_aculeatus
ENSCGRG00001013548	Srp72	89	86.555	ENSGAGG00000024611	SRP72	99	86.387	Gopherus_agassizii
ENSCGRG00001013548	Srp72	100	97.168	ENSGGOG00000013234	-	100	97.168	Gorilla_gorilla
ENSCGRG00001013548	Srp72	99	77.096	ENSHBUG00000020723	srp72	99	77.096	Haplochromis_burtoni
ENSCGRG00001013548	Srp72	98	79.466	ENSHGLG00000010633	-	98	87.366	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	97	73.588	ENSHGLG00000018597	-	100	74.256	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	100	96.721	ENSHGLG00000009791	SRP72	100	96.721	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	98	91.145	ENSHGLG00000005029	-	98	90.687	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	86	93.886	ENSHGLG00000003950	-	100	93.886	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	56	76.765	ENSHGLG00000003496	-	97	76.765	Heterocephalus_glaber_female
ENSCGRG00001013548	Srp72	100	96.721	ENSHGLG00100009021	SRP72	100	96.721	Heterocephalus_glaber_male
ENSCGRG00001013548	Srp72	100	78.990	ENSHGLG00100009346	-	100	86.893	Heterocephalus_glaber_male
ENSCGRG00001013548	Srp72	86	93.450	ENSHGLG00100017133	-	100	93.450	Heterocephalus_glaber_male
ENSCGRG00001013548	Srp72	98	91.145	ENSHGLG00100011236	-	98	90.687	Heterocephalus_glaber_male
ENSCGRG00001013548	Srp72	99	76.762	ENSHCOG00000013760	srp72	99	76.462	Hippocampus_comes
ENSCGRG00001013548	Srp72	99	76.612	ENSIPUG00000000210	srp72	99	76.612	Ictalurus_punctatus
ENSCGRG00001013548	Srp72	100	97.765	ENSSTOG00000007305	SRP72	100	97.765	Ictidomys_tridecemlineatus
ENSCGRG00001013548	Srp72	100	96.137	ENSJJAG00000018324	Srp72	100	96.137	Jaculus_jaculus
ENSCGRG00001013548	Srp72	99	75.187	ENSKMAG00000003776	srp72	99	75.299	Kryptolebias_marmoratus
ENSCGRG00001013548	Srp72	97	78.528	ENSLOCG00000002628	srp72	97	78.187	Lepisosteus_oculatus
ENSCGRG00001013548	Srp72	100	96.721	ENSLAFG00000018307	SRP72	100	96.721	Loxodonta_africana
ENSCGRG00001013548	Srp72	98	78.082	ENSMFAG00000037164	-	97	78.516	Macaca_fascicularis
ENSCGRG00001013548	Srp72	100	97.168	ENSMFAG00000031065	SRP72	100	97.168	Macaca_fascicularis
ENSCGRG00001013548	Srp72	94	71.224	ENSMMUG00000021262	-	95	70.927	Macaca_mulatta
ENSCGRG00001013548	Srp72	100	97.049	ENSMMUG00000016368	SRP72	100	97.049	Macaca_mulatta
ENSCGRG00001013548	Srp72	100	97.168	ENSMNEG00000038065	-	100	97.168	Macaca_nemestrina
ENSCGRG00001013548	Srp72	95	95.925	ENSMLEG00000030140	-	95	95.925	Mandrillus_leucophaeus
ENSCGRG00001013548	Srp72	99	76.304	ENSMAMG00000014989	srp72	89	76.304	Mastacembelus_armatus
ENSCGRG00001013548	Srp72	99	77.096	ENSMZEG00005003325	srp72	99	77.096	Maylandia_zebra
ENSCGRG00001013548	Srp72	95	82.520	ENSMGAG00000008567	SRP72	100	85.470	Meleagris_gallopavo
ENSCGRG00001013548	Srp72	100	99.405	ENSMAUG00000001237	Srp72	100	99.405	Mesocricetus_auratus
ENSCGRG00001013548	Srp72	95	95.611	ENSMICG00000008507	-	95	95.611	Microcebus_murinus
ENSCGRG00001013548	Srp72	100	99.672	ENSMOCG00000020309	Srp72	100	99.672	Microtus_ochrogaster
ENSCGRG00001013548	Srp72	99	74.701	ENSMMOG00000002627	srp72	99	75.150	Mola_mola
ENSCGRG00001013548	Srp72	96	85.670	ENSMODG00000020697	SRP72	100	85.693	Monodelphis_domestica
ENSCGRG00001013548	Srp72	99	76.198	ENSMALG00000003747	srp72	100	76.364	Monopterus_albus
ENSCGRG00001013548	Srp72	100	98.525	MGP_CAROLIEiJ_G0027323	Srp72	100	98.525	Mus_caroli
ENSCGRG00001013548	Srp72	100	98.525	ENSMUSG00000036323	Srp72	100	98.525	Mus_musculus
ENSCGRG00001013548	Srp72	100	97.876	MGP_PahariEiJ_G0017103	Srp72	100	97.876	Mus_pahari
ENSCGRG00001013548	Srp72	100	98.525	MGP_SPRETEiJ_G0028317	Srp72	100	98.525	Mus_spretus
ENSCGRG00001013548	Srp72	100	96.721	ENSMPUG00000004828	SRP72	100	96.721	Mustela_putorius_furo
ENSCGRG00001013548	Srp72	100	96.000	ENSMLUG00000007344	SRP72	100	96.000	Myotis_lucifugus
ENSCGRG00001013548	Srp72	100	97.168	ENSNGAG00000012595	Srp72	100	97.168	Nannospalax_galili
ENSCGRG00001013548	Srp72	99	73.802	ENSNBRG00000014492	srp72	99	73.802	Neolamprologus_brichardi
ENSCGRG00001013548	Srp72	100	91.058	ENSNLEG00000008806	-	100	91.058	Nomascus_leucogenys
ENSCGRG00001013548	Srp72	98	78.116	ENSMEUG00000005164	SRP72	90	90.000	Notamacropus_eugenii
ENSCGRG00001013548	Srp72	96	94.704	ENSOPRG00000012521	SRP72	100	94.486	Ochotona_princeps
ENSCGRG00001013548	Srp72	98	93.902	ENSODEG00000012214	SRP72	100	93.899	Octodon_degus
ENSCGRG00001013548	Srp72	99	76.900	ENSONIG00000001446	srp72	99	76.900	Oreochromis_niloticus
ENSCGRG00001013548	Srp72	96	71.101	ENSOANG00000008562	SRP72	97	70.802	Ornithorhynchus_anatinus
ENSCGRG00001013548	Srp72	100	96.572	ENSOCUG00000012226	SRP72	100	96.572	Oryctolagus_cuniculus
ENSCGRG00001013548	Srp72	99	75.412	ENSORLG00000020418	srp72	99	74.963	Oryzias_latipes
ENSCGRG00001013548	Srp72	99	75.505	ENSORLG00020009138	srp72	98	73.763	Oryzias_latipes_hni
ENSCGRG00001013548	Srp72	99	74.813	ENSORLG00015018251	srp72	99	74.363	Oryzias_latipes_hsok
ENSCGRG00001013548	Srp72	99	74.213	ENSOMEG00000022008	srp72	99	74.663	Oryzias_melastigma
ENSCGRG00001013548	Srp72	98	96.489	ENSOGAG00000003578	SRP72	100	96.423	Otolemur_garnettii
ENSCGRG00001013548	Srp72	100	97.317	ENSOARG00000004329	SRP72	100	97.317	Ovis_aries
ENSCGRG00001013548	Srp72	99	69.033	ENSPPAG00000011428	-	95	70.031	Pan_paniscus
ENSCGRG00001013548	Srp72	80	76.493	ENSPPAG00000032490	-	91	75.556	Pan_paniscus
ENSCGRG00001013548	Srp72	100	97.466	ENSPPAG00000042265	SRP72	100	97.466	Pan_paniscus
ENSCGRG00001013548	Srp72	100	97.019	ENSPPRG00000015991	SRP72	100	97.019	Panthera_pardus
ENSCGRG00001013548	Srp72	100	97.019	ENSPTIG00000018786	SRP72	100	97.019	Panthera_tigris_altaica
ENSCGRG00001013548	Srp72	99	71.192	ENSPTRG00000048100	-	95	72.214	Pan_troglodytes
ENSCGRG00001013548	Srp72	100	97.466	ENSPTRG00000048466	-	100	97.466	Pan_troglodytes
ENSCGRG00001013548	Srp72	80	76.306	ENSPTRG00000043609	-	91	75.277	Pan_troglodytes
ENSCGRG00001013548	Srp72	94	76.378	ENSPANG00000030230	-	97	77.033	Papio_anubis
ENSCGRG00001013548	Srp72	100	97.317	ENSPANG00000005495	SRP72	100	97.317	Papio_anubis
ENSCGRG00001013548	Srp72	93	85.942	ENSPSIG00000003003	SRP72	100	85.981	Pelodiscus_sinensis
ENSCGRG00001013548	Srp72	100	98.532	ENSPEMG00000012828	-	100	98.532	Peromyscus_maniculatus_bairdii
ENSCGRG00001013548	Srp72	99	89.879	ENSPCIG00000000732	SRP72	99	89.403	Phascolarctos_cinereus
ENSCGRG00001013548	Srp72	99	76.383	ENSPFOG00000003480	srp72	99	76.682	Poecilia_formosa
ENSCGRG00001013548	Srp72	99	76.532	ENSPLAG00000020122	srp72	99	76.682	Poecilia_latipinna
ENSCGRG00001013548	Srp72	99	76.084	ENSPMEG00000019988	srp72	99	76.383	Poecilia_mexicana
ENSCGRG00001013548	Srp72	100	75.654	ENSPREG00000006218	srp72	100	75.817	Poecilia_reticulata
ENSCGRG00001013548	Srp72	100	97.466	ENSPPYG00000014752	-	78	97.466	Pongo_abelii
ENSCGRG00001013548	Srp72	62	79.581	ENSPPYG00000009152	-	95	78.272	Pongo_abelii
ENSCGRG00001013548	Srp72	98	95.725	ENSPVAG00000005590	SRP72	100	95.678	Pteropus_vampyrus
ENSCGRG00001013548	Srp72	99	77.395	ENSPNYG00000001916	srp72	99	77.395	Pundamilia_nyererei
ENSCGRG00001013548	Srp72	99	76.981	ENSPNAG00000022424	srp72	99	76.831	Pygocentrus_nattereri
ENSCGRG00001013548	Srp72	100	96.721	ENSRNOG00000002100	LOC108348180	100	96.721	Rattus_norvegicus
ENSCGRG00001013548	Srp72	98	90.992	ENSRBIG00000042069	SRP72	100	91.356	Rhinopithecus_bieti
ENSCGRG00001013548	Srp72	99	75.151	ENSRBIG00000029328	-	98	75.043	Rhinopithecus_bieti
ENSCGRG00001013548	Srp72	100	97.317	ENSRROG00000035704	SRP72	100	97.317	Rhinopithecus_roxellana
ENSCGRG00001013548	Srp72	95	89.655	ENSSHAG00000000614	SRP72	100	86.202	Sarcophilus_harrisii
ENSCGRG00001013548	Srp72	99	78.561	ENSSFOG00015002026	srp72	97	78.187	Scleropages_formosus
ENSCGRG00001013548	Srp72	99	76.000	ENSSMAG00000007639	srp72	99	75.261	Scophthalmus_maximus
ENSCGRG00001013548	Srp72	99	76.716	ENSSDUG00000007345	srp72	99	77.463	Seriola_dumerili
ENSCGRG00001013548	Srp72	99	76.602	ENSSLDG00000021819	srp72	99	77.211	Seriola_lalandi_dorsalis
ENSCGRG00001013548	Srp72	82	91.316	ENSSARG00000005804	SRP72	77	91.414	Sorex_araneus
ENSCGRG00001013548	Srp72	96	85.826	ENSSPUG00000009740	SRP72	99	85.075	Sphenodon_punctatus
ENSCGRG00001013548	Srp72	99	76.048	ENSSPAG00000011565	srp72	99	76.796	Stegastes_partitus
ENSCGRG00001013548	Srp72	99	94.268	ENSSSCG00000008900	SRP72	100	94.048	Sus_scrofa
ENSCGRG00001013548	Srp72	96	86.335	ENSTGUG00000004767	SRP72	99	84.799	Taeniopygia_guttata
ENSCGRG00001013548	Srp72	99	75.712	ENSTRUG00000009831	srp72	99	75.412	Takifugu_rubripes
ENSCGRG00001013548	Srp72	99	77.049	ENSTNIG00000013073	srp72	99	77.049	Tetraodon_nigroviridis
ENSCGRG00001013548	Srp72	90	90.625	ENSTBEG00000007394	SRP72	90	84.746	Tupaia_belangeri
ENSCGRG00001013548	Srp72	94	96.372	ENSTTRG00000010945	SRP72	100	96.372	Tursiops_truncatus
ENSCGRG00001013548	Srp72	65	96.465	ENSUAMG00000001701	SRP72	100	96.316	Ursus_americanus
ENSCGRG00001013548	Srp72	100	97.168	ENSUMAG00000008151	SRP72	100	97.168	Ursus_maritimus
ENSCGRG00001013548	Srp72	100	95.529	ENSVPAG00000000458	SRP72	100	95.529	Vicugna_pacos
ENSCGRG00001013548	Srp72	100	97.466	ENSVVUG00000006020	SRP72	100	97.466	Vulpes_vulpes
ENSCGRG00001013548	Srp72	95	78.807	ENSXETG00000010205	srp72	100	78.807	Xenopus_tropicalis
ENSCGRG00001013548	Srp72	99	76.084	ENSXMAG00000018000	srp72	99	76.190	Xiphophorus_maculatus