EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001013602 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 1467 bases
Position: chrscaffold_66:31017-32483
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	1	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	2	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	3	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	4	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	5	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	6	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	7	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	8	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	9	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	10	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	11	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	12	13
ENSCGRP00001012101	zf-C2H2	PF00096.26	8.6e-70	13	13
ENSCGRP00001012101	zf-met	PF12874.7	6.5e-09	1	2
ENSCGRP00001012101	zf-met	PF12874.7	6.5e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016334	-	1467	-	ENSCGRP00001012101	488 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001013602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001013602	-	93	47.771	ENSCGRG00001020646	Gm3854	61	47.771
ENSCGRG00001013602	-	97	49.815	ENSCGRG00001024303	-	98	49.815
ENSCGRG00001013602	-	97	49.730	ENSCGRG00001012803	-	78	49.730
ENSCGRG00001013602	-	84	42.628	ENSCGRG00001004047	-	67	43.885
ENSCGRG00001013602	-	80	35.625	ENSCGRG00001008879	Maz	62	30.208
ENSCGRG00001013602	-	94	38.251	ENSCGRG00001009557	Zfp319	96	37.008
ENSCGRG00001013602	-	82	40.351	ENSCGRG00001023063	Zfp423	96	39.506
ENSCGRG00001013602	-	98	41.716	ENSCGRG00001019408	Zbtb17	60	43.841
ENSCGRG00001013602	-	81	41.379	ENSCGRG00001013279	Zfp784	66	34.632
ENSCGRG00001013602	-	82	38.235	ENSCGRG00001013674	Snai2	54	38.235
ENSCGRG00001013602	-	99	45.000	ENSCGRG00001001639	Zfp882	86	45.000
ENSCGRG00001013602	-	95	51.657	ENSCGRG00001017579	Zfp112	72	51.657
ENSCGRG00001013602	-	95	48.418	ENSCGRG00001013939	Zfp454	68	48.418
ENSCGRG00001013602	-	93	32.768	ENSCGRG00001001429	Zfp574	93	35.246
ENSCGRG00001013602	-	99	48.387	ENSCGRG00001024630	-	85	48.387
ENSCGRG00001013602	-	93	52.800	ENSCGRG00001019143	-	82	52.800
ENSCGRG00001013602	-	96	64.255	ENSCGRG00001012523	-	99	64.255
ENSCGRG00001013602	-	97	51.037	ENSCGRG00001013367	Zfp61	62	51.037
ENSCGRG00001013602	-	79	41.748	ENSCGRG00001007749	Snai1	53	41.748
ENSCGRG00001013602	-	97	46.447	ENSCGRG00001011966	Zfp715	71	46.447
ENSCGRG00001013602	-	97	55.532	ENSCGRG00001002297	-	98	55.532
ENSCGRG00001013602	-	94	46.301	ENSCGRG00001021088	Zfp354a	76	46.301
ENSCGRG00001013602	-	92	47.411	ENSCGRG00001010752	2610008E11Rik	76	47.411
ENSCGRG00001013602	-	96	41.969	ENSCGRG00001019468	Zfp628	59	45.283
ENSCGRG00001013602	-	94	36.923	ENSCGRG00001017330	Repin1	83	36.923
ENSCGRG00001013602	-	94	41.463	ENSCGRG00001013598	Zfp865	82	32.317
ENSCGRG00001013602	-	96	47.368	ENSCGRG00001015424	-	80	47.368
ENSCGRG00001013602	-	98	47.462	ENSCGRG00001000576	Zfp26	73	47.462
ENSCGRG00001013602	-	96	50.144	ENSCGRG00001007163	-	84	50.144
ENSCGRG00001013602	-	97	49.818	ENSCGRG00001013561	Zfp768	55	49.818
ENSCGRG00001013602	-	95	45.128	ENSCGRG00001002406	Zfp39	60	41.920
ENSCGRG00001013602	-	97	49.123	ENSCGRG00001012640	Zfp94	81	49.123
ENSCGRG00001013602	-	82	31.000	ENSCGRG00001004071	Patz1	59	31.000
ENSCGRG00001013602	-	97	47.619	ENSCGRG00001007115	-	100	47.619
ENSCGRG00001013602	-	84	44.340	ENSCGRG00001005125	Wt1	66	43.119
ENSCGRG00001013602	-	98	44.118	ENSCGRG00001023858	Zfp560	68	43.237
ENSCGRG00001013602	-	81	48.696	ENSCGRG00001010581	Prdm5	74	48.696
ENSCGRG00001013602	-	86	43.421	ENSCGRG00001012398	Zfp236	67	43.421
ENSCGRG00001013602	-	93	42.972	ENSCGRG00001010967	Zfp1	83	42.972
ENSCGRG00001013602	-	83	46.939	ENSCGRG00001019569	Sall4	53	46.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013602	-	96	57.554	ENSCING00000003470	-	94	57.554	Ciona_intestinalis
ENSCGRG00001013602	-	83	51.256	ENSCING00000018801	zf(c2h2)-138	90	51.256	Ciona_intestinalis
ENSCGRG00001013602	-	95	48.921	ENSCSAVG00000010156	-	98	48.921	Ciona_savignyi
ENSCGRG00001013602	-	98	51.894	ENSCGRG00000000778	-	85	51.894	Cricetulus_griseus_crigri
ENSCGRG00001013602	-	96	64.255	ENSCGRG00000018332	Zfp53	85	64.255	Cricetulus_griseus_crigri
ENSCGRG00001013602	-	95	43.796	ENSEBUG00000012454	-	92	43.796	Eptatretus_burgeri
ENSCGRG00001013602	-	97	47.950	ENSEBUG00000012823	-	78	47.453	Eptatretus_burgeri
ENSCGRG00001013602	-	94	50.126	ENSEBUG00000005655	-	87	47.175	Eptatretus_burgeri
ENSCGRG00001013602	-	95	47.872	ENSEBUG00000016878	-	88	46.875	Eptatretus_burgeri
ENSCGRG00001013602	-	96	44.571	ENSEBUG00000001525	-	84	44.571	Eptatretus_burgeri
ENSCGRG00001013602	-	93	43.678	ENSEBUG00000008792	-	93	43.678	Eptatretus_burgeri
ENSCGRG00001013602	-	96	59.271	ENSMAUG00000004844	-	83	57.703	Mesocricetus_auratus
ENSCGRG00001013602	-	94	53.985	ENSMAUG00000000939	-	94	55.890	Mesocricetus_auratus
ENSCGRG00001013602	-	96	60.851	ENSMAUG00000005974	-	89	58.403	Mesocricetus_auratus
ENSCGRG00001013602	-	99	63.430	ENSMOCG00000006946	Zfp53	87	63.430	Microtus_ochrogaster
ENSCGRG00001013602	-	97	52.698	ENSMOCG00000007851	-	99	52.618	Microtus_ochrogaster
ENSCGRG00001013602	-	98	51.718	MGP_CAROLIEiJ_G0021132	Zfp948	90	57.783	Mus_caroli
ENSCGRG00001013602	-	96	55.645	ENSMUSG00000062743	Zfp677	84	57.388	Mus_musculus
ENSCGRG00001013602	-	95	41.088	ENSPSIG00000009270	-	74	41.088	Pelodiscus_sinensis
ENSCGRG00001013602	-	97	47.177	ENSPEMG00000023883	-	83	47.379	Peromyscus_maniculatus_bairdii
ENSCGRG00001013602	-	95	48.430	ENSPEMG00000007241	-	95	52.022	Peromyscus_maniculatus_bairdii
ENSCGRG00001013602	-	97	56.338	ENSRNOG00000052406	LOC102552527	87	58.120	Rattus_norvegicus