EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCGRG00001013643 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Cricetulus_griseus_chok1gshd
Status
putative
Strand
Minus strand
Length
1107 bases
Position
chrscaffold_64:2161081-2162187
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCGRP00001012161Smg4_UPF3PF03467.157e-5311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCGRT00001016394-1107-ENSCGRP00001012161368 (aa)--
Gene Model
Click here to download ENSCGRG00001013643's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013643's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCGRG00001013643-9599.430ENSCGRG00001006858-7599.430
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCGRG00001013643-6556.846ENSG00000169062UPF3A5553.069Homo_sapiens
ENSCGRG00001013643-8981.098ENSG00000125351UPF3B9687.019Homo_sapiens
ENSCGRG00001013643-9258.430ENSAPOG00000012775upf3b7458.263Acanthochromis_polyacanthus
ENSCGRG00001013643-9480.403ENSAMEG00000000163UPF3B7583.191Ailuropoda_melanoleuca
ENSCGRG00001013643-8354.633ENSAMEG00000004259UPF3A5753.008Ailuropoda_melanoleuca
ENSCGRG00001013643-7557.143ENSACIG00000013582upf3b6755.352Amphilophus_citrinellus
ENSCGRG00001013643-9254.386ENSAOCG00000000706upf3b6856.667Amphiprion_ocellaris
ENSCGRG00001013643-9255.556ENSAPEG00000005545upf3b6957.530Amphiprion_percula
ENSCGRG00001013643-9254.493ENSATEG00000018742upf3b6857.229Anabas_testudineus
ENSCGRG00001013643-7952.577ENSACAG00000001540UPF3A6551.282Anolis_carolinensis
ENSCGRG00001013643-8465.924ENSACAG00000003625UPF3B6965.060Anolis_carolinensis
ENSCGRG00001013643-7367.537ENSANAG00000033169-9566.300Aotus_nancymaae
ENSCGRG00001013643-9580.342ENSANAG00000025598-8469.597Aotus_nancymaae
ENSCGRG00001013643-9480.115ENSANAG00000021894-9786.538Aotus_nancymaae
ENSCGRG00001013643-9054.030ENSACLG00000001649upf3b6856.325Astatotilapia_calliptera
ENSCGRG00001013643-7354.643ENSAMXG00000000199upf3b8854.643Astyanax_mexicanus
ENSCGRG00001013643-7380.669ENSBTAG00000035615UPF3B8884.015Bos_taurus
ENSCGRG00001013643-5332.020WBGene00004882smg-45031.325Caenorhabditis_elegans
ENSCGRG00001013643-9479.539ENSCJAG00000004975UPF3B9786.058Callithrix_jacchus
ENSCGRG00001013643-9479.251ENSCAFG00000018426UPF3B7681.197Canis_familiaris
ENSCGRG00001013643-9052.679ENSCAFG00000006504UPF3A5355.385Canis_familiaris
ENSCGRG00001013643-9052.976ENSCAFG00020014268UPF3A5255.769Canis_lupus_dingo
ENSCGRG00001013643-9476.301ENSCAFG00020004074UPF3B7475.714Canis_lupus_dingo
ENSCGRG00001013643-8362.295ENSCHIG00000011454-6862.581Capra_hircus
ENSCGRG00001013643-9476.667ENSCHIG00000000247-7579.396Capra_hircus
ENSCGRG00001013643-9476.389ENSCHIG00000018011-8883.643Capra_hircus
ENSCGRG00001013643-9479.827ENSTSYG00000014690UPF3B9680.374Carlito_syrichta
ENSCGRG00001013643-6458.051ENSCCAG00000018406UPF3A5554.044Cebus_capucinus
ENSCGRG00001013643-7662.500ENSCCAG00000029813-8760.595Cebus_capucinus
ENSCGRG00001013643-7353.846ENSCCAG00000021964-8257.143Cebus_capucinus
ENSCGRG00001013643-8980.793ENSCATG00000017506UPF3B9787.019Cercocebus_atys
ENSCGRG00001013643-9480.692ENSCLAG00000003260UPF3B7583.476Chinchilla_lanigera
ENSCGRG00001013643-8978.006ENSCSAG00000018348UPF3B7580.220Chlorocebus_sabaeus
ENSCGRG00001013643-9060.000ENSCPBG00000020685UPF3B6860.303Chrysemys_picta_bellii
ENSCGRG00001013643-7380.297ENSCANG00000029220UPF3B8583.643Colobus_angolensis_palliatus
ENSCGRG00001013643-8199.331ENSCGRG00000007627Upf3b7299.331Cricetulus_griseus_crigri
ENSCGRG00001013643-9555.710ENSCSEG00000002046upf3b6655.723Cynoglossus_semilaevis
ENSCGRG00001013643-9553.521ENSCVAG00000005030upf3b6456.169Cyprinodon_variegatus
ENSCGRG00001013643-7859.044ENSDARG00000000489upf3b6065.125Danio_rerio
ENSCGRG00001013643-8350.962ENSDNOG00000034391UPF3A6848.875Dasypus_novemcinctus
ENSCGRG00001013643-9476.389ENSDNOG00000008665UPF3B7579.121Dasypus_novemcinctus
ENSCGRG00001013643-9481.214ENSDORG00000006077Upf3b7582.906Dipodomys_ordii
ENSCGRG00001013643-8350.645ENSEASG00005021884UPF3A5354.373Equus_asinus_asinus
ENSCGRG00001013643-9480.347ENSEASG00005012919UPF3B7580.571Equus_asinus_asinus
ENSCGRG00001013643-8351.133ENSECAG00000017141UPF3A5354.373Equus_caballus
ENSCGRG00001013643-9480.347ENSECAG00000016947UPF3B7580.571Equus_caballus
ENSCGRG00001013643-9556.620ENSELUG00000020389upf3b6556.667Esox_lucius
ENSCGRG00001013643-6763.241ENSFCAG00000014602UPF3A5058.678Felis_catus
ENSCGRG00001013643-8981.707ENSFCAG00000004388UPF3B7583.003Felis_catus
ENSCGRG00001013643-9058.287ENSFALG00000001569UPF3B7158.496Ficedula_albicollis
ENSCGRG00001013643-9480.692ENSFDAG00000018869UPF3B7583.476Fukomys_damarensis
ENSCGRG00001013643-9254.386ENSFHEG00000017895upf3b7452.809Fundulus_heteroclitus
ENSCGRG00001013643-9256.268ENSGMOG00000001621upf3b7154.830Gadus_morhua
ENSCGRG00001013643-9365.439ENSGALG00000008618UPF3B7465.642Gallus_gallus
ENSCGRG00001013643-7961.092ENSGAFG00000000829upf3b7553.652Gambusia_affinis
ENSCGRG00001013643-9053.274ENSGACG00000017435upf3b7164.115Gasterosteus_aculeatus
ENSCGRG00001013643-9063.095ENSGAGG00000001219UPF3B6964.048Gopherus_agassizii
ENSCGRG00001013643-8981.098ENSGGOG00000023995UPF3B8583.643Gorilla_gorilla
ENSCGRG00001013643-6556.846ENSGGOG00000015428UPF3A5553.069Gorilla_gorilla
ENSCGRG00001013643-9054.030ENSHBUG00000017393upf3b6856.325Haplochromis_burtoni
ENSCGRG00001013643-9072.892ENSHGLG00000011189-7975.915Heterocephalus_glaber_female
ENSCGRG00001013643-9479.251ENSHGLG00000019582-7582.051Heterocephalus_glaber_female
ENSCGRG00001013643-9279.586ENSHGLG00100002042-7182.317Heterocephalus_glaber_male
ENSCGRG00001013643-9072.892ENSHGLG00100001889-7975.915Heterocephalus_glaber_male
ENSCGRG00001013643-9358.166ENSHCOG00000017004upf3b6757.958Hippocampus_comes
ENSCGRG00001013643-7564.643ENSIPUG00000019249upf3b7254.079Ictalurus_punctatus
ENSCGRG00001013643-9480.403ENSSTOG00000001101UPF3B7583.191Ictidomys_tridecemlineatus
ENSCGRG00001013643-8984.756ENSJJAG00000000053Upf3b7487.179Jaculus_jaculus
ENSCGRG00001013643-9155.457ENSKMAG00000020300upf3b6856.364Kryptolebias_marmoratus
ENSCGRG00001013643-7764.014ENSLBEG00000028689upf3b5962.976Labrus_bergylta
ENSCGRG00001013643-7863.140ENSLACG00000008691UPF3B6760.542Latimeria_chalumnae
ENSCGRG00001013643-6573.140ENSLOCG00000015238upf3b6959.688Lepisosteus_oculatus
ENSCGRG00001013643-8148.515ENSLAFG00000023358UPF3A5555.022Loxodonta_africana
ENSCGRG00001013643-9479.251ENSLAFG00000001267UPF3B7582.051Loxodonta_africana
ENSCGRG00001013643-5966.814ENSMFAG00000045275-9465.899Macaca_fascicularis
ENSCGRG00001013643-8980.793ENSMFAG00000045414UPF3B9787.019Macaca_fascicularis
ENSCGRG00001013643-8980.793ENSMMUG00000020222UPF3B9787.019Macaca_mulatta
ENSCGRG00001013643-7351.613ENSMMUG00000007449UPF3A6153.091Macaca_mulatta
ENSCGRG00001013643-5965.044ENSMMUG00000046682-9464.055Macaca_mulatta
ENSCGRG00001013643-5966.372ENSMNEG00000040898-9465.438Macaca_nemestrina
ENSCGRG00001013643-8980.793ENSMNEG00000039794UPF3B9787.019Macaca_nemestrina
ENSCGRG00001013643-7352.158ENSMLEG00000014726UPF3A6552.899Mandrillus_leucophaeus
ENSCGRG00001013643-8980.793ENSMLEG00000010999UPF3B9787.019Mandrillus_leucophaeus
ENSCGRG00001013643-9054.030ENSMZEG00005007871upf3b6856.325Maylandia_zebra
ENSCGRG00001013643-7655.088ENSMGAG00000014837UPF3A5157.895Meleagris_gallopavo
ENSCGRG00001013643-7065.649ENSMGAG00000007728UPF3B6865.543Meleagris_gallopavo
ENSCGRG00001013643-9484.438ENSMAUG00000008705Upf3b7488.604Mesocricetus_auratus
ENSCGRG00001013643-7380.370ENSMICG00000001743UPF3B8583.704Microcebus_murinus
ENSCGRG00001013643-9483.056ENSMOCG00000017893Upf3b7584.890Microtus_ochrogaster
ENSCGRG00001013643-8254.902ENSMMOG00000004183upf3b6952.568Mola_mola
ENSCGRG00001013643-8270.066ENSMODG00000010232UPF3B6674.733Monodelphis_domestica
ENSCGRG00001013643-7957.483ENSMODG00000003159UPF3A6452.708Monodelphis_domestica
ENSCGRG00001013643-8954.242ENSMALG00000008042upf3b6757.576Monopterus_albus
ENSCGRG00001013643-9485.879MGP_CAROLIEiJ_G0032999Upf3b9287.029Mus_caroli
ENSCGRG00001013643-9486.455ENSMUSG00000036572Upf3b9287.448Mus_musculus
ENSCGRG00001013643-9484.150MGP_PahariEiJ_G0031543Upf3b9284.519Mus_pahari
ENSCGRG00001013643-9486.455MGP_SPRETEiJ_G0034152Upf3b9287.448Mus_spretus
ENSCGRG00001013643-9480.115ENSMPUG00000001531UPF3B7682.051Mustela_putorius_furo
ENSCGRG00001013643-9480.403ENSMLUG00000010821UPF3B7583.191Myotis_lucifugus
ENSCGRG00001013643-8151.466ENSMLUG00000015905UPF3A5557.627Myotis_lucifugus
ENSCGRG00001013643-9385.380ENSNGAG00000008231Upf3b7485.470Nannospalax_galili
ENSCGRG00001013643-5759.906ENSNBRG00000011560upf3b9562.581Neolamprologus_brichardi
ENSCGRG00001013643-8580.317ENSNLEG00000014897UPF3B7983.108Nomascus_leucogenys
ENSCGRG00001013643-5968.664ENSNLEG00000027516-9467.788Nomascus_leucogenys
ENSCGRG00001013643-6482.581ENSMEUG00000015615UPF3B5682.692Notamacropus_eugenii
ENSCGRG00001013643-9479.251ENSODEG00000002186-8282.051Octodon_degus
ENSCGRG00001013643-5961.290ENSODEG00000000596-9560.287Octodon_degus
ENSCGRG00001013643-5967.281ENSODEG00000006064-9466.827Octodon_degus
ENSCGRG00001013643-6172.807ENSODEG00000007164-9071.564Octodon_degus
ENSCGRG00001013643-9055.522ENSONIG00000002536upf3b6857.831Oreochromis_niloticus
ENSCGRG00001013643-8064.333ENSOANG00000002594-6563.380Ornithorhynchus_anatinus
ENSCGRG00001013643-9478.056ENSOCUG00000010213UPF3B7580.769Oryctolagus_cuniculus
ENSCGRG00001013643-7858.076ENSORLG00000001026upf3b6953.892Oryzias_latipes
ENSCGRG00001013643-7857.732ENSORLG00020003758upf3b6953.593Oryzias_latipes_hni
ENSCGRG00001013643-7857.732ENSORLG00015012954upf3b6953.593Oryzias_latipes_hsok
ENSCGRG00001013643-7857.586ENSOMEG00000014736upf3b6953.313Oryzias_melastigma
ENSCGRG00001013643-8981.098ENSOGAG00000004643-7583.191Otolemur_garnettii
ENSCGRG00001013643-9469.540ENSOGAG00000033003-7770.170Otolemur_garnettii
ENSCGRG00001013643-9476.033ENSOARG00000016051-7678.747Ovis_aries
ENSCGRG00001013643-8268.106ENSOARG00000007869-6869.504Ovis_aries
ENSCGRG00001013643-9053.026ENSOARG00000009004UPF3A5751.825Ovis_aries
ENSCGRG00001013643-8981.098ENSPPAG00000040390UPF3B8583.643Pan_paniscus
ENSCGRG00001013643-6460.669ENSPPAG00000042267UPF3A5553.309Pan_paniscus
ENSCGRG00001013643-8355.732ENSPPRG00000025062UPF3A5157.661Panthera_pardus
ENSCGRG00001013643-9381.633ENSPPRG00000023536UPF3B7584.046Panthera_pardus
ENSCGRG00001013643-8981.707ENSPTIG00000015264UPF3B8585.130Panthera_tigris_altaica
ENSCGRG00001013643-8981.098ENSPTRG00000022228UPF3B8583.643Pan_troglodytes
ENSCGRG00001013643-6347.845ENSPTRG00000041835-5743.525Pan_troglodytes
ENSCGRG00001013643-6460.669ENSPTRG00000006073UPF3A5453.309Pan_troglodytes
ENSCGRG00001013643-8980.793ENSPANG00000000900UPF3B9787.019Papio_anubis
ENSCGRG00001013643-5967.556ENSPANG00000029350-9366.667Papio_anubis
ENSCGRG00001013643-5560.891ENSPANG00000004346UPF3A5753.430Papio_anubis
ENSCGRG00001013643-8064.214ENSPKIG00000019226upf3b7474.783Paramormyrops_kingsleyae
ENSCGRG00001013643-7458.214ENSPSIG00000007468UPF3A6354.231Pelodiscus_sinensis
ENSCGRG00001013643-7063.498ENSPSIG00000005833UPF3B8464.854Pelodiscus_sinensis
ENSCGRG00001013643-7461.151ENSPMGG00000016067upf3b9362.500Periophthalmus_magnuspinnatus
ENSCGRG00001013643-9485.632ENSPEMG00000012352Upf3b7488.352Peromyscus_maniculatus_bairdii
ENSCGRG00001013643-8963.030ENSPCIG00000028914UPF3B6562.420Phascolarctos_cinereus
ENSCGRG00001013643-5759.330ENSPCIG00000019590-6669.333Phascolarctos_cinereus
ENSCGRG00001013643-9253.509ENSPLAG00000019922upf3b7554.494Poecilia_latipinna
ENSCGRG00001013643-9253.509ENSPLAG00000005105upf3b7554.494Poecilia_latipinna
ENSCGRG00001013643-9253.509ENSPMEG00000023532upf3b7554.494Poecilia_mexicana
ENSCGRG00001013643-8149.175ENSPPYG00000005536UPF3A5552.708Pongo_abelii
ENSCGRG00001013643-7380.000ENSPPYG00000020675-8283.333Pongo_abelii
ENSCGRG00001013643-6547.541ENSPCAG00000013124UPF3A5442.857Procavia_capensis
ENSCGRG00001013643-9476.944ENSPCAG00000009464UPF3B7579.670Procavia_capensis
ENSCGRG00001013643-9480.172ENSPCOG00000021960UPF3B8583.704Propithecus_coquereli
ENSCGRG00001013643-9568.407ENSPVAG00000014075UPF3B7670.879Pteropus_vampyrus
ENSCGRG00001013643-9154.277ENSPNYG00000009846upf3b6956.325Pundamilia_nyererei
ENSCGRG00001013643-9057.567ENSPNAG00000021528upf3b8658.974Pygocentrus_nattereri
ENSCGRG00001013643-9486.455ENSRNOG00000039994Upf3b7489.174Rattus_norvegicus
ENSCGRG00001013643-7351.986ENSRBIG00000034007UPF3A6849.673Rhinopithecus_bieti
ENSCGRG00001013643-6578.926ENSRBIG00000037219UPF3B6981.887Rhinopithecus_bieti
ENSCGRG00001013643-7351.986ENSRROG00000012212UPF3A5953.091Rhinopithecus_roxellana
ENSCGRG00001013643-8981.098ENSRROG00000041031UPF3B9787.019Rhinopithecus_roxellana
ENSCGRG00001013643-9480.403ENSSBOG00000019740UPF3B9987.019Saimiri_boliviensis_boliviensis
ENSCGRG00001013643-8270.066ENSSHAG00000008634UPF3B7067.964Sarcophilus_harrisii
ENSCGRG00001013643-6364.103ENSSHAG00000009895UPF3A6651.439Sarcophilus_harrisii
ENSCGRG00001013643-8259.672ENSSFOG00015005614upf3b6956.798Scleropages_formosus
ENSCGRG00001013643-9059.524ENSSMAG00000012913upf3b8462.868Scophthalmus_maximus
ENSCGRG00001013643-7758.042ENSSDUG00000005682upf3b6856.024Seriola_dumerili
ENSCGRG00001013643-9053.134ENSSLDG00000003130upf3b6856.325Seriola_lalandi_dorsalis
ENSCGRG00001013643-7972.131ENSSARG00000004147UPF3B7278.914Sorex_araneus
ENSCGRG00001013643-7746.713ENSSARG00000007262UPF3A6647.122Sorex_araneus
ENSCGRG00001013643-9361.429ENSSPUG00000013082UPF3B6861.677Sphenodon_punctatus
ENSCGRG00001013643-6156.195ENSSPAG00000007938upf3a8859.420Stegastes_partitus
ENSCGRG00001013643-9158.112ENSSPAG00000009989upf3b6957.015Stegastes_partitus
ENSCGRG00001013643-7949.671ENSSSCG00000024679UPF3A6153.030Sus_scrofa
ENSCGRG00001013643-9480.115ENSSSCG00000012617UPF3B7582.906Sus_scrofa
ENSCGRG00001013643-8355.949ENSTGUG00000009493UPF3A5959.574Taeniopygia_guttata
ENSCGRG00001013643-7665.493ENSTGUG00000003413UPF3B6666.784Taeniopygia_guttata
ENSCGRG00001013643-8258.882ENSTRUG00000010645upf3b7256.037Takifugu_rubripes
ENSCGRG00001013643-8257.237ENSTNIG00000015763upf3b6554.723Tetraodon_nigroviridis
ENSCGRG00001013643-9459.722ENSTBEG00000003229UPF3B7562.637Tupaia_belangeri
ENSCGRG00001013643-5342.564ENSTBEG00000017186-6042.500Tupaia_belangeri
ENSCGRG00001013643-9377.778ENSUAMG00000024565UPF3B7477.714Ursus_americanus
ENSCGRG00001013643-8472.189ENSUMAG00000002150UPF3B6872.013Ursus_maritimus
ENSCGRG00001013643-7478.049ENSVPAG00000009971UPF3B7181.443Vicugna_pacos
ENSCGRG00001013643-6357.576ENSVPAG00000003525UPF3A5757.576Vicugna_pacos
ENSCGRG00001013643-9476.879ENSVVUG00000011594UPF3B9786.538Vulpes_vulpes
ENSCGRG00001013643-6456.198ENSXETG00000002572upf3a5555.882Xenopus_tropicalis
ENSCGRG00001013643-8358.065ENSXETG00000007440upf3b8466.507Xenopus_tropicalis
ENSCGRG00001013643-5763.679ENSXCOG00000016586upf3b9763.507Xiphophorus_couchianus
ENSCGRG00001013643-9253.936ENSXMAG00000013680upf3b7553.933Xiphophorus_maculatus

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