EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001013672 (Gene tree)
Gene ID: -
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH type containing 12C
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 54056 bases
Position: chrscaffold_5:68140014-68194069
Accession: 3026959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012220	RNase_Zc3h12a	PF11977.8	3.1e-65	1	1
ENSCGRP00001012228	RNase_Zc3h12a	PF11977.8	3.1e-65	1	1
ENSCGRP00001012224	RNase_Zc3h12a	PF11977.8	3.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016453	-	3088	-	ENSCGRP00001012220	884 (aa)	-	-
ENSCGRT00001016461	-	2661	-	ENSCGRP00001012228	886 (aa)	-	-
ENSCGRT00001016457	-	2712	-	ENSCGRP00001012224	903 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001013672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001013672	Zc3h12c	92	53.191	ENSCGRG00001018643	Zc3h12b	91	55.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013672	Zc3h12c	99	93.273	ENSG00000149289	ZC3H12C	100	93.427	Homo_sapiens
ENSCGRG00001013672	Zc3h12c	99	93.037	ENSAMEG00000009188	ZC3H12C	99	93.037	Ailuropoda_melanoleuca
ENSCGRG00001013672	Zc3h12c	71	88.160	ENSAPLG00000002854	ZC3H12C	100	88.160	Anas_platyrhynchos
ENSCGRG00001013672	Zc3h12c	99	83.163	ENSACAG00000001031	ZC3H12C	98	82.034	Anolis_carolinensis
ENSCGRG00001013672	Zc3h12c	99	93.843	ENSANAG00000026999	ZC3H12C	99	93.843	Aotus_nancymaae
ENSCGRG00001013672	Zc3h12c	100	91.299	ENSBTAG00000008732	ZC3H12C	100	91.299	Bos_taurus
ENSCGRG00001013672	Zc3h12c	99	93.387	ENSCJAG00000010319	ZC3H12C	99	93.387	Callithrix_jacchus
ENSCGRG00001013672	Zc3h12c	99	89.282	ENSCAFG00000014297	ZC3H12C	99	89.282	Canis_familiaris
ENSCGRG00001013672	Zc3h12c	99	89.282	ENSCAFG00020006999	ZC3H12C	99	89.282	Canis_lupus_dingo
ENSCGRG00001013672	Zc3h12c	100	91.412	ENSCHIG00000021221	ZC3H12C	100	91.412	Capra_hircus
ENSCGRG00001013672	Zc3h12c	91	91.271	ENSTSYG00000005412	ZC3H12C	99	91.271	Carlito_syrichta
ENSCGRG00001013672	Zc3h12c	99	89.498	ENSCAPG00000011610	ZC3H12C	99	89.498	Cavia_aperea
ENSCGRG00001013672	Zc3h12c	99	89.384	ENSCPOG00000032962	ZC3H12C	99	89.384	Cavia_porcellus
ENSCGRG00001013672	Zc3h12c	100	93.891	ENSCCAG00000022395	ZC3H12C	100	94.131	Cebus_capucinus
ENSCGRG00001013672	Zc3h12c	100	92.873	ENSCATG00000041641	ZC3H12C	100	92.873	Cercocebus_atys
ENSCGRG00001013672	Zc3h12c	99	93.151	ENSCLAG00000012577	ZC3H12C	100	93.310	Chinchilla_lanigera
ENSCGRG00001013672	Zc3h12c	100	92.421	ENSCSAG00000002945	ZC3H12C	100	92.421	Chlorocebus_sabaeus
ENSCGRG00001013672	Zc3h12c	99	86.007	ENSCHOG00000013202	-	100	85.973	Choloepus_hoffmanni
ENSCGRG00001013672	Zc3h12c	99	84.790	ENSCPBG00000021043	ZC3H12C	100	84.346	Chrysemys_picta_bellii
ENSCGRG00001013672	Zc3h12c	99	92.808	ENSCANG00000040994	ZC3H12C	99	92.808	Colobus_angolensis_palliatus
ENSCGRG00001013672	Zc3h12c	99	100.000	ENSCGRG00000001308	Zc3h12c	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001013672	Zc3h12c	99	90.433	ENSDNOG00000013040	ZC3H12C	99	90.205	Dasypus_novemcinctus
ENSCGRG00001013672	Zc3h12c	99	91.438	ENSDORG00000009134	Zc3h12c	99	91.438	Dipodomys_ordii
ENSCGRG00001013672	Zc3h12c	71	95.200	ENSETEG00000008027	ZC3H12C	100	95.200	Echinops_telfairi
ENSCGRG00001013672	Zc3h12c	100	93.326	ENSEASG00005010098	ZC3H12C	100	93.326	Equus_asinus_asinus
ENSCGRG00001013672	Zc3h12c	99	93.273	ENSECAG00000000462	ZC3H12C	100	93.427	Equus_caballus
ENSCGRG00001013672	Zc3h12c	65	91.419	ENSEEUG00000005709	-	100	91.419	Erinaceus_europaeus
ENSCGRG00001013672	Zc3h12c	99	90.992	ENSFCAG00000010665	ZC3H12C	99	90.992	Felis_catus
ENSCGRG00001013672	Zc3h12c	99	83.634	ENSFALG00000008776	ZC3H12C	100	82.677	Ficedula_albicollis
ENSCGRG00001013672	Zc3h12c	99	93.493	ENSFDAG00000017997	ZC3H12C	100	94.014	Fukomys_damarensis
ENSCGRG00001013672	Zc3h12c	96	84.014	ENSGALG00000017154	ZC3H12C	100	83.431	Gallus_gallus
ENSCGRG00001013672	Zc3h12c	95	82.976	ENSGAGG00000024154	ZC3H12C	86	82.833	Gopherus_agassizii
ENSCGRG00001013672	Zc3h12c	99	93.158	ENSGGOG00000010117	ZC3H12C	99	93.158	Gorilla_gorilla
ENSCGRG00001013672	Zc3h12c	100	93.439	ENSHGLG00000019021	ZC3H12C	100	93.439	Heterocephalus_glaber_female
ENSCGRG00001013672	Zc3h12c	100	93.439	ENSHGLG00100007295	ZC3H12C	100	93.439	Heterocephalus_glaber_male
ENSCGRG00001013672	Zc3h12c	100	95.349	ENSSTOG00000022143	ZC3H12C	100	96.119	Ictidomys_tridecemlineatus
ENSCGRG00001013672	Zc3h12c	99	95.434	ENSJJAG00000001147	Zc3h12c	100	95.434	Jaculus_jaculus
ENSCGRG00001013672	Zc3h12c	99	74.411	ENSLACG00000009305	ZC3H12C	99	74.186	Latimeria_chalumnae
ENSCGRG00001013672	Zc3h12c	71	95.375	ENSLAFG00000016296	ZC3H12C	100	95.375	Loxodonta_africana
ENSCGRG00001013672	Zc3h12c	100	92.873	ENSMFAG00000042068	ZC3H12C	100	92.873	Macaca_fascicularis
ENSCGRG00001013672	Zc3h12c	99	93.044	ENSMMUG00000048435	ZC3H12C	99	93.044	Macaca_mulatta
ENSCGRG00001013672	Zc3h12c	100	92.873	ENSMNEG00000032663	ZC3H12C	100	93.310	Macaca_nemestrina
ENSCGRG00001013672	Zc3h12c	99	92.930	ENSMLEG00000032083	ZC3H12C	99	92.930	Mandrillus_leucophaeus
ENSCGRG00001013672	Zc3h12c	99	83.126	ENSMGAG00000015143	ZC3H12C	99	82.559	Meleagris_gallopavo
ENSCGRG00001013672	Zc3h12c	100	98.341	ENSMAUG00000020412	Zc3h12c	100	98.341	Mesocricetus_auratus
ENSCGRG00001013672	Zc3h12c	100	94.231	ENSMICG00000011455	ZC3H12C	100	94.718	Microcebus_murinus
ENSCGRG00001013672	Zc3h12c	100	97.564	ENSMOCG00000020090	Zc3h12c	100	97.564	Microtus_ochrogaster
ENSCGRG00001013672	Zc3h12c	96	89.019	ENSMODG00000014555	ZC3H12C	100	88.318	Monodelphis_domestica
ENSCGRG00001013672	Zc3h12c	100	95.928	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	95.928	Mus_caroli
ENSCGRG00001013672	Zc3h12c	100	96.267	ENSMUSG00000035164	Zc3h12c	100	96.267	Mus_musculus
ENSCGRG00001013672	Zc3h12c	100	94.910	MGP_PahariEiJ_G0015078	Zc3h12c	100	94.910	Mus_pahari
ENSCGRG00001013672	Zc3h12c	100	96.041	MGP_SPRETEiJ_G0033350	Zc3h12c	100	96.041	Mus_spretus
ENSCGRG00001013672	Zc3h12c	100	85.936	ENSMPUG00000005888	ZC3H12C	100	85.936	Mustela_putorius_furo
ENSCGRG00001013672	Zc3h12c	99	92.352	ENSMLUG00000017189	ZC3H12C	100	92.352	Myotis_lucifugus
ENSCGRG00001013672	Zc3h12c	100	94.574	ENSNGAG00000023957	Zc3h12c	100	94.574	Nannospalax_galili
ENSCGRG00001013672	Zc3h12c	99	93.387	ENSNLEG00000029829	ZC3H12C	99	93.387	Nomascus_leucogenys
ENSCGRG00001013672	Zc3h12c	99	85.097	ENSMEUG00000015398	ZC3H12C	100	84.983	Notamacropus_eugenii
ENSCGRG00001013672	Zc3h12c	71	83.043	ENSOPRG00000003370	-	96	83.043	Ochotona_princeps
ENSCGRG00001013672	Zc3h12c	99	89.977	ENSODEG00000011026	ZC3H12C	100	89.977	Octodon_degus
ENSCGRG00001013672	Zc3h12c	71	84.177	ENSOANG00000006242	-	99	84.177	Ornithorhynchus_anatinus
ENSCGRG00001013672	Zc3h12c	99	93.273	ENSOCUG00000005283	ZC3H12C	99	93.273	Oryctolagus_cuniculus
ENSCGRG00001013672	Zc3h12c	99	92.702	ENSOGAG00000013223	ZC3H12C	99	92.702	Otolemur_garnettii
ENSCGRG00001013672	Zc3h12c	99	87.215	ENSOARG00000012999	ZC3H12C	97	92.513	Ovis_aries
ENSCGRG00001013672	Zc3h12c	99	93.501	ENSPPAG00000041914	ZC3H12C	99	93.501	Pan_paniscus
ENSCGRG00001013672	Zc3h12c	99	90.764	ENSPPRG00000006582	ZC3H12C	99	90.764	Panthera_pardus
ENSCGRG00001013672	Zc3h12c	86	88.629	ENSPTIG00000009995	ZC3H12C	99	88.629	Panthera_tigris_altaica
ENSCGRG00001013672	Zc3h12c	99	93.501	ENSPTRG00000050494	ZC3H12C	99	93.501	Pan_troglodytes
ENSCGRG00001013672	Zc3h12c	100	92.873	ENSPANG00000023930	ZC3H12C	100	92.873	Papio_anubis
ENSCGRG00001013672	Zc3h12c	96	83.565	ENSPSIG00000005959	ZC3H12C	100	83.333	Pelodiscus_sinensis
ENSCGRG00001013672	Zc3h12c	99	89.954	ENSPEMG00000008502	Zc3h12c	100	97.204	Peromyscus_maniculatus_bairdii
ENSCGRG00001013672	Zc3h12c	96	88.785	ENSPCIG00000022169	ZC3H12C	100	88.318	Phascolarctos_cinereus
ENSCGRG00001013672	Zc3h12c	96	93.310	ENSPPYG00000003851	ZC3H12C	100	93.310	Pongo_abelii
ENSCGRG00001013672	Zc3h12c	64	94.737	ENSPCAG00000015682	ZC3H12C	100	94.737	Procavia_capensis
ENSCGRG00001013672	Zc3h12c	99	94.527	ENSPCOG00000024737	ZC3H12C	99	94.527	Propithecus_coquereli
ENSCGRG00001013672	Zc3h12c	99	91.136	ENSPVAG00000014329	ZC3H12C	99	91.136	Pteropus_vampyrus
ENSCGRG00001013672	Zc3h12c	100	96.267	ENSRNOG00000012470	Zc3h12c	100	96.267	Rattus_norvegicus
ENSCGRG00001013672	Zc3h12c	99	92.922	ENSRBIG00000040441	ZC3H12C	100	93.075	Rhinopithecus_bieti
ENSCGRG00001013672	Zc3h12c	99	92.922	ENSRROG00000004335	ZC3H12C	99	92.922	Rhinopithecus_roxellana
ENSCGRG00001013672	Zc3h12c	99	94.185	ENSSBOG00000025582	ZC3H12C	100	94.249	Saimiri_boliviensis_boliviensis
ENSCGRG00001013672	Zc3h12c	99	85.925	ENSSHAG00000005597	ZC3H12C	100	88.201	Sarcophilus_harrisii
ENSCGRG00001013672	Zc3h12c	71	96.172	ENSSARG00000003433	ZC3H12C	100	96.172	Sorex_araneus
ENSCGRG00001013672	Zc3h12c	99	85.227	ENSSPUG00000001832	ZC3H12C	99	84.659	Sphenodon_punctatus
ENSCGRG00001013672	Zc3h12c	100	93.107	ENSSSCG00000015014	ZC3H12C	100	93.435	Sus_scrofa
ENSCGRG00001013672	Zc3h12c	72	86.677	ENSTGUG00000011244	ZC3H12C	99	86.677	Taeniopygia_guttata
ENSCGRG00001013672	Zc3h12c	99	93.493	ENSTTRG00000005096	ZC3H12C	100	93.493	Tursiops_truncatus
ENSCGRG00001013672	Zc3h12c	99	93.721	ENSUAMG00000006051	ZC3H12C	99	93.642	Ursus_americanus
ENSCGRG00001013672	Zc3h12c	99	93.615	ENSUMAG00000007283	ZC3H12C	99	93.615	Ursus_maritimus
ENSCGRG00001013672	Zc3h12c	88	90.880	ENSVPAG00000003110	ZC3H12C	88	90.880	Vicugna_pacos
ENSCGRG00001013672	Zc3h12c	99	70.754	ENSXETG00000033837	ZC3H12C	99	71.005	Xenopus_tropicalis