EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001013729 (Gene tree)
Gene ID: -
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 585246 bases
Position: chrscaffold_4:39115849-39701094
Accession: 100766551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012294	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSCGRP00001012296	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSCGRP00001012296	RRM_1	PF00076.22	3e-18	1	1
ENSCGRP00001012294	RRM_1	PF00076.22	3.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016529	-	1254	XM_003496382	ENSCGRP00001012296	417 (aa)	XP_003496430	UPI00022F3696
ENSCGRT00001016527	-	1191	XM_007638307	ENSCGRP00001012294	396 (aa)	XP_007636497	UPI00022F3697

Gene Model

Click here to download ENSCGRG00001013729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013729's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001013729	Rbfox1	100	62.044	ENSCGRG00001017727	Rbfox2	100	61.614
ENSCGRG00001013729	Rbfox1	91	55.181	ENSCGRG00001019476	Rbfox3	100	60.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013729	Rbfox1	100	98.237	ENSG00000078328	RBFOX1	100	98.237	Homo_sapiens
ENSCGRG00001013729	Rbfox1	100	75.181	ENSAPOG00000003197	rbfox1	100	75.663	Acanthochromis_polyacanthus
ENSCGRG00001013729	Rbfox1	60	94.000	ENSAMEG00000008605	RBFOX1	100	94.000	Ailuropoda_melanoleuca
ENSCGRG00001013729	Rbfox1	67	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSCGRG00001013729	Rbfox1	73	69.707	ENSAOCG00000008283	rbfox1	98	69.231	Amphiprion_ocellaris
ENSCGRG00001013729	Rbfox1	95	70.635	ENSAPEG00000010636	rbfox1	100	70.526	Amphiprion_percula
ENSCGRG00001013729	Rbfox1	73	68.285	ENSATEG00000007513	rbfox1	97	67.846	Anabas_testudineus
ENSCGRG00001013729	Rbfox1	98	93.573	ENSAPLG00000013263	RBFOX1	97	93.573	Anas_platyrhynchos
ENSCGRG00001013729	Rbfox1	99	86.967	ENSACAG00000004013	RBFOX1	100	86.967	Anolis_carolinensis
ENSCGRG00001013729	Rbfox1	99	94.670	ENSANAG00000029527	RBFOX1	98	97.194	Aotus_nancymaae
ENSCGRG00001013729	Rbfox1	56	87.387	ENSAMXG00000002431	rbfox1	65	87.500	Astyanax_mexicanus
ENSCGRG00001013729	Rbfox1	99	94.416	ENSBTAG00000007210	RBFOX1	98	96.939	Bos_taurus
ENSCGRG00001013729	Rbfox1	100	97.129	ENSCJAG00000017351	RBFOX1	100	97.129	Callithrix_jacchus
ENSCGRG00001013729	Rbfox1	100	97.608	ENSCAFG00000019082	RBFOX1	100	97.608	Canis_familiaris
ENSCGRG00001013729	Rbfox1	71	96.959	ENSCAFG00020024881	RBFOX1	83	96.959	Canis_lupus_dingo
ENSCGRG00001013729	Rbfox1	99	94.416	ENSCHIG00000023549	RBFOX1	98	96.939	Capra_hircus
ENSCGRG00001013729	Rbfox1	98	95.373	ENSTSYG00000005334	RBFOX1	100	97.429	Carlito_syrichta
ENSCGRG00001013729	Rbfox1	100	96.651	ENSCAPG00000017669	RBFOX1	100	97.165	Cavia_aperea
ENSCGRG00001013729	Rbfox1	100	97.229	ENSCPOG00000011314	RBFOX1	100	97.229	Cavia_porcellus
ENSCGRG00001013729	Rbfox1	100	97.129	ENSCCAG00000023031	RBFOX1	100	97.129	Cebus_capucinus
ENSCGRG00001013729	Rbfox1	100	97.608	ENSCATG00000033816	RBFOX1	100	97.608	Cercocebus_atys
ENSCGRG00001013729	Rbfox1	100	97.229	ENSCLAG00000012761	RBFOX1	100	97.229	Chinchilla_lanigera
ENSCGRG00001013729	Rbfox1	84	95.224	ENSCSAG00000008739	RBFOX1	89	95.224	Chlorocebus_sabaeus
ENSCGRG00001013729	Rbfox1	100	75.598	ENSCHOG00000012843	RBFOX1	100	75.598	Choloepus_hoffmanni
ENSCGRG00001013729	Rbfox1	98	93.814	ENSCPBG00000026626	RBFOX1	98	93.112	Chrysemys_picta_bellii
ENSCGRG00001013729	Rbfox1	100	97.608	ENSCANG00000033125	RBFOX1	100	97.608	Colobus_angolensis_palliatus
ENSCGRG00001013729	Rbfox1	100	100.000	ENSCGRG00000003272	Rbfox1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001013729	Rbfox1	95	71.285	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSCGRG00001013729	Rbfox1	100	80.151	ENSDARG00000014746	rbfox1	100	85.366	Danio_rerio
ENSCGRG00001013729	Rbfox1	98	97.179	ENSDNOG00000043612	RBFOX1	94	97.179	Dasypus_novemcinctus
ENSCGRG00001013729	Rbfox1	100	93.052	ENSDORG00000010024	Rbfox1	100	93.052	Dipodomys_ordii
ENSCGRG00001013729	Rbfox1	100	78.177	ENSETEG00000003771	RBFOX1	100	78.177	Echinops_telfairi
ENSCGRG00001013729	Rbfox1	98	97.943	ENSEASG00005011599	RBFOX1	98	97.704	Equus_asinus_asinus
ENSCGRG00001013729	Rbfox1	97	97.284	ENSECAG00000012667	RBFOX1	98	97.284	Equus_caballus
ENSCGRG00001013729	Rbfox1	84	66.390	ENSELUG00000013096	rbfox1	100	52.393	Esox_lucius
ENSCGRG00001013729	Rbfox1	98	97.686	ENSFCAG00000025322	RBFOX1	96	90.909	Felis_catus
ENSCGRG00001013729	Rbfox1	83	91.291	ENSFALG00000004027	RBFOX1	100	91.291	Ficedula_albicollis
ENSCGRG00001013729	Rbfox1	100	97.733	ENSFDAG00000007388	RBFOX1	100	97.733	Fukomys_damarensis
ENSCGRG00001013729	Rbfox1	100	92.344	ENSGALG00000034325	RBFOX1	100	92.344	Gallus_gallus
ENSCGRG00001013729	Rbfox1	100	91.627	ENSGAGG00000023681	RBFOX1	100	93.899	Gopherus_agassizii
ENSCGRG00001013729	Rbfox1	100	97.608	ENSGGOG00000016871	-	100	97.608	Gorilla_gorilla
ENSCGRG00001013729	Rbfox1	100	97.481	ENSHGLG00000016944	RBFOX1	100	97.481	Heterocephalus_glaber_female
ENSCGRG00001013729	Rbfox1	100	97.481	ENSHGLG00100003272	RBFOX1	100	97.481	Heterocephalus_glaber_male
ENSCGRG00001013729	Rbfox1	85	71.182	ENSHCOG00000016419	rbfox1	91	71.264	Hippocampus_comes
ENSCGRG00001013729	Rbfox1	95	82.979	ENSIPUG00000015215	rbfox1	100	82.979	Ictalurus_punctatus
ENSCGRG00001013729	Rbfox1	100	96.977	ENSSTOG00000000322	RBFOX1	100	96.977	Ictidomys_tridecemlineatus
ENSCGRG00001013729	Rbfox1	100	94.724	ENSJJAG00000002575	Rbfox1	100	94.724	Jaculus_jaculus
ENSCGRG00001013729	Rbfox1	99	72.705	ENSLBEG00000014659	rbfox1	99	72.457	Labrus_bergylta
ENSCGRG00001013729	Rbfox1	98	86.260	ENSLOCG00000006675	rbfox1	99	86.260	Lepisosteus_oculatus
ENSCGRG00001013729	Rbfox1	78	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSCGRG00001013729	Rbfox1	100	97.368	ENSMFAG00000036447	RBFOX1	100	97.368	Macaca_fascicularis
ENSCGRG00001013729	Rbfox1	100	97.368	ENSMMUG00000003458	RBFOX1	100	97.368	Macaca_mulatta
ENSCGRG00001013729	Rbfox1	100	97.368	ENSMNEG00000032034	RBFOX1	100	97.368	Macaca_nemestrina
ENSCGRG00001013729	Rbfox1	100	97.608	ENSMLEG00000015382	RBFOX1	100	97.608	Mandrillus_leucophaeus
ENSCGRG00001013729	Rbfox1	95	74.235	ENSMAMG00000003142	rbfox1	100	74.745	Mastacembelus_armatus
ENSCGRG00001013729	Rbfox1	71	87.900	ENSMGAG00000008606	RBFOX1	96	87.410	Meleagris_gallopavo
ENSCGRG00001013729	Rbfox1	99	58.734	ENSMAUG00000020570	Rbfox1	99	57.975	Mesocricetus_auratus
ENSCGRG00001013729	Rbfox1	98	90.256	ENSMICG00000034286	RBFOX1	100	88.586	Microcebus_murinus
ENSCGRG00001013729	Rbfox1	100	99.520	ENSMOCG00000020932	Rbfox1	100	99.520	Microtus_ochrogaster
ENSCGRG00001013729	Rbfox1	86	70.145	ENSMMOG00000009716	rbfox1	86	70.501	Mola_mola
ENSCGRG00001013729	Rbfox1	80	94.357	ENSMODG00000005826	RBFOX1	90	94.357	Monodelphis_domestica
ENSCGRG00001013729	Rbfox1	100	75.306	ENSMALG00000003337	rbfox1	100	75.306	Monopterus_albus
ENSCGRG00001013729	Rbfox1	100	99.760	MGP_CAROLIEiJ_G0020427	Rbfox1	100	99.760	Mus_caroli
ENSCGRG00001013729	Rbfox1	100	99.520	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSCGRG00001013729	Rbfox1	100	99.760	MGP_PahariEiJ_G0016135	Rbfox1	100	99.760	Mus_pahari
ENSCGRG00001013729	Rbfox1	100	99.281	MGP_SPRETEiJ_G0021321	Rbfox1	100	99.281	Mus_spretus
ENSCGRG00001013729	Rbfox1	84	95.482	ENSMPUG00000014822	RBFOX1	91	93.333	Mustela_putorius_furo
ENSCGRG00001013729	Rbfox1	78	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSCGRG00001013729	Rbfox1	100	98.325	ENSNGAG00000023276	Rbfox1	100	98.325	Nannospalax_galili
ENSCGRG00001013729	Rbfox1	98	60.241	ENSNBRG00000011084	rbfox1	98	59.070	Neolamprologus_brichardi
ENSCGRG00001013729	Rbfox1	100	97.368	ENSNLEG00000010017	-	100	97.368	Nomascus_leucogenys
ENSCGRG00001013729	Rbfox1	100	79.904	ENSMEUG00000012525	RBFOX1	100	79.904	Notamacropus_eugenii
ENSCGRG00001013729	Rbfox1	100	79.187	ENSOPRG00000006199	-	100	77.990	Ochotona_princeps
ENSCGRG00001013729	Rbfox1	100	96.725	ENSODEG00000013166	RBFOX1	100	96.725	Octodon_degus
ENSCGRG00001013729	Rbfox1	84	92.239	ENSOANG00000002379	RBFOX1	89	92.239	Ornithorhynchus_anatinus
ENSCGRG00001013729	Rbfox1	57	92.444	ENSOCUG00000001205	-	100	92.444	Oryctolagus_cuniculus
ENSCGRG00001013729	Rbfox1	100	96.222	ENSOGAG00000025535	RBFOX1	100	96.222	Otolemur_garnettii
ENSCGRG00001013729	Rbfox1	63	84.337	ENSOARG00000005135	RBFOX1	100	83.600	Ovis_aries
ENSCGRG00001013729	Rbfox1	98	98.196	ENSPPAG00000036238	-	100	98.196	Pan_paniscus
ENSCGRG00001013729	Rbfox1	100	97.368	ENSPPRG00000006546	RBFOX1	100	97.368	Panthera_pardus
ENSCGRG00001013729	Rbfox1	100	85.390	ENSPTIG00000021154	RBFOX1	99	85.604	Panthera_tigris_altaica
ENSCGRG00001013729	Rbfox1	100	97.608	ENSPTRG00000007744	RBFOX1	100	97.608	Pan_troglodytes
ENSCGRG00001013729	Rbfox1	100	97.608	ENSPANG00000026500	RBFOX1	100	97.608	Papio_anubis
ENSCGRG00001013729	Rbfox1	73	82.759	ENSPKIG00000019353	rbfox1	86	82.534	Paramormyrops_kingsleyae
ENSCGRG00001013729	Rbfox1	100	81.454	ENSPKIG00000009667	-	95	82.880	Paramormyrops_kingsleyae
ENSCGRG00001013729	Rbfox1	99	92.875	ENSPSIG00000006523	RBFOX1	98	92.875	Pelodiscus_sinensis
ENSCGRG00001013729	Rbfox1	100	99.760	ENSPEMG00000017607	Rbfox1	100	99.760	Peromyscus_maniculatus_bairdii
ENSCGRG00001013729	Rbfox1	73	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSCGRG00001013729	Rbfox1	84	95.783	ENSPPYG00000007079	-	91	93.611	Pongo_abelii
ENSCGRG00001013729	Rbfox1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSCGRG00001013729	Rbfox1	100	97.129	ENSPCOG00000025687	RBFOX1	100	97.129	Propithecus_coquereli
ENSCGRG00001013729	Rbfox1	100	93.062	ENSPVAG00000013467	RBFOX1	100	93.062	Pteropus_vampyrus
ENSCGRG00001013729	Rbfox1	95	81.061	ENSPNAG00000023109	rbfox1	100	81.061	Pygocentrus_nattereri
ENSCGRG00001013729	Rbfox1	100	97.122	ENSRNOG00000002827	Rbfox1	100	97.122	Rattus_norvegicus
ENSCGRG00001013729	Rbfox1	98	98.196	ENSRBIG00000044478	RBFOX1	100	98.196	Rhinopithecus_bieti
ENSCGRG00001013729	Rbfox1	100	97.608	ENSRROG00000044411	RBFOX1	100	97.608	Rhinopithecus_roxellana
ENSCGRG00001013729	Rbfox1	99	96.692	ENSSBOG00000033726	RBFOX1	98	96.692	Saimiri_boliviensis_boliviensis
ENSCGRG00001013729	Rbfox1	100	91.940	ENSSHAG00000009257	RBFOX1	100	91.940	Sarcophilus_harrisii
ENSCGRG00001013729	Rbfox1	98	67.684	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSCGRG00001013729	Rbfox1	88	70.225	ENSSFOG00015009955	-	87	68.280	Scleropages_formosus
ENSCGRG00001013729	Rbfox1	98	76.355	ENSSMAG00000015505	rbfox1	96	72.577	Scophthalmus_maximus
ENSCGRG00001013729	Rbfox1	98	73.980	ENSSDUG00000016413	rbfox1	99	73.724	Seriola_dumerili
ENSCGRG00001013729	Rbfox1	85	71.765	ENSSLDG00000009353	rbfox1	97	71.429	Seriola_lalandi_dorsalis
ENSCGRG00001013729	Rbfox1	85	82.353	ENSSPUG00000009732	RBFOX1	87	82.405	Sphenodon_punctatus
ENSCGRG00001013729	Rbfox1	98	75.369	ENSSPAG00000009723	rbfox1	100	75.123	Stegastes_partitus
ENSCGRG00001013729	Rbfox1	97	96.790	ENSSSCG00000007917	RBFOX1	98	96.790	Sus_scrofa
ENSCGRG00001013729	Rbfox1	98	93.573	ENSTGUG00000004562	RBFOX1	100	93.573	Taeniopygia_guttata
ENSCGRG00001013729	Rbfox1	98	74.877	ENSTRUG00000020940	rbfox1	99	74.877	Takifugu_rubripes
ENSCGRG00001013729	Rbfox1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSCGRG00001013729	Rbfox1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSCGRG00001013729	Rbfox1	100	96.890	ENSTTRG00000005700	RBFOX1	100	96.890	Tursiops_truncatus
ENSCGRG00001013729	Rbfox1	100	91.436	ENSUAMG00000024633	RBFOX1	100	91.436	Ursus_americanus
ENSCGRG00001013729	Rbfox1	100	82.620	ENSUMAG00000003579	RBFOX1	100	82.620	Ursus_maritimus
ENSCGRG00001013729	Rbfox1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSCGRG00001013729	Rbfox1	98	97.686	ENSVVUG00000017311	RBFOX1	96	90.909	Vulpes_vulpes