EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCGRG00001013939 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: -
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 12287 bases
Position: chrscaffold_4:64785393-64797679
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	1	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	2	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	3	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	4	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	5	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	6	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	7	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	8	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	9	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	10	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	11	12
ENSCGRP00001012563	zf-C2H2	PF00096.26	3.6e-67	12	12
ENSCGRP00001012563	zf-met	PF12874.7	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001016797	-	1611	-	ENSCGRP00001012563	536 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001013939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001013939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCGRG00001013939	Zfp454	66	36.389	ENSCGRG00001001429	Zfp574	93	36.389
ENSCGRG00001013939	Zfp454	65	45.675	ENSCGRG00001013367	Zfp61	60	45.675
ENSCGRG00001013939	Zfp454	66	49.457	ENSCGRG00001019468	Zfp628	59	49.457
ENSCGRG00001013939	Zfp454	85	33.565	ENSCGRG00001017330	Repin1	85	33.565
ENSCGRG00001013939	Zfp454	97	45.777	ENSCGRG00001001639	Zfp882	99	45.777
ENSCGRG00001013939	Zfp454	68	40.227	ENSCGRG00001009557	Zfp319	91	39.394
ENSCGRG00001013939	Zfp454	97	50.704	ENSCGRG00001007163	-	99	50.704
ENSCGRG00001013939	Zfp454	66	52.632	ENSCGRG00001013044	Bcl6b	54	52.632
ENSCGRG00001013939	Zfp454	68	42.609	ENSCGRG00001002297	-	98	42.609
ENSCGRG00001013939	Zfp454	73	35.714	ENSCGRG00001023063	Zfp423	89	35.714
ENSCGRG00001013939	Zfp454	97	51.163	ENSCGRG00001010967	Zfp1	98	51.163
ENSCGRG00001013939	Zfp454	67	41.228	ENSCGRG00001011389	Snai3	51	41.228
ENSCGRG00001013939	Zfp454	68	50.943	ENSCGRG00001013598	Zfp865	81	36.822
ENSCGRG00001013939	Zfp454	72	50.814	ENSCGRG00001012640	Zfp94	87	50.814
ENSCGRG00001013939	Zfp454	97	49.544	ENSCGRG00001010752	2610008E11Rik	94	49.544
ENSCGRG00001013939	Zfp454	99	53.913	ENSCGRG00001023858	Zfp560	91	53.913
ENSCGRG00001013939	Zfp454	99	47.790	ENSCGRG00001021088	Zfp354a	99	49.311
ENSCGRG00001013939	Zfp454	98	49.235	ENSCGRG00001024303	-	99	56.383
ENSCGRG00001013939	Zfp454	68	50.000	ENSCGRG00001012523	-	98	50.000
ENSCGRG00001013939	Zfp454	67	53.077	ENSCGRG00001019143	-	72	52.381
ENSCGRG00001013939	Zfp454	98	51.412	ENSCGRG00001000576	Zfp26	87	51.412
ENSCGRG00001013939	Zfp454	79	54.980	ENSCGRG00001012803	-	95	54.980
ENSCGRG00001013939	Zfp454	51	41.393	ENSCGRG00001018100	Zfp202	64	40.724
ENSCGRG00001013939	Zfp454	66	49.123	ENSCGRG00001010581	Prdm5	69	49.123
ENSCGRG00001013939	Zfp454	65	42.105	ENSCGRG00001013674	Snai2	56	42.105
ENSCGRG00001013939	Zfp454	98	50.000	ENSCGRG00001020646	Gm3854	96	50.000
ENSCGRG00001013939	Zfp454	82	48.732	ENSCGRG00001011966	Zfp715	74	48.732
ENSCGRG00001013939	Zfp454	67	49.695	ENSCGRG00001015424	-	74	49.695
ENSCGRG00001013939	Zfp454	98	48.433	ENSCGRG00001002406	Zfp39	92	48.433
ENSCGRG00001013939	Zfp454	75	41.096	ENSCGRG00001012398	Zfp236	70	41.096
ENSCGRG00001013939	Zfp454	65	38.934	ENSCGRG00001018513	Zfp652	52	35.656
ENSCGRG00001013939	Zfp454	68	46.906	ENSCGRG00001004047	-	67	46.906
ENSCGRG00001013939	Zfp454	67	52.347	ENSCGRG00001013561	Zfp768	51	51.761
ENSCGRG00001013939	Zfp454	98	50.000	ENSCGRG00001024630	-	97	50.000
ENSCGRG00001013939	Zfp454	98	54.828	ENSCGRG00001007115	-	100	54.828
ENSCGRG00001013939	Zfp454	58	48.980	ENSCGRG00001019569	Sall4	53	48.980
ENSCGRG00001013939	Zfp454	68	48.418	ENSCGRG00001013602	-	95	48.418
ENSCGRG00001013939	Zfp454	74	33.333	ENSCGRG00001013279	Zfp784	78	35.079
ENSCGRG00001013939	Zfp454	98	51.289	ENSCGRG00001017579	Zfp112	98	51.289
ENSCGRG00001013939	Zfp454	65	36.364	ENSCGRG00001008879	Maz	68	31.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001013939	Zfp454	79	80.760	ENSCAPG00000006920	-	100	80.760	Cavia_aperea
ENSCGRG00001013939	Zfp454	79	80.523	ENSCPOG00000035563	-	100	80.523	Cavia_porcellus
ENSCGRG00001013939	Zfp454	100	75.410	ENSCATG00000031926	ZNF454	100	75.410	Cercocebus_atys
ENSCGRG00001013939	Zfp454	79	82.311	ENSCLAG00000010195	-	100	82.311	Chinchilla_lanigera
ENSCGRG00001013939	Zfp454	100	98.321	ENSCGRG00000014813	Zfp454	100	98.321	Cricetulus_griseus_crigri
ENSCGRG00001013939	Zfp454	92	75.889	ENSEASG00005012616	ZNF454	100	75.889	Equus_asinus_asinus
ENSCGRG00001013939	Zfp454	97	72.285	ENSEEUG00000007684	ZNF454	99	72.285	Erinaceus_europaeus
ENSCGRG00001013939	Zfp454	100	75.228	ENSMFAG00000043337	ZNF454	100	75.228	Macaca_fascicularis
ENSCGRG00001013939	Zfp454	100	75.228	ENSMMUG00000045647	ZNF454	100	75.228	Macaca_mulatta
ENSCGRG00001013939	Zfp454	100	75.228	ENSMNEG00000002699	ZNF454	100	75.228	Macaca_nemestrina
ENSCGRG00001013939	Zfp454	100	75.228	ENSMLEG00000039955	ZNF454	100	75.228	Mandrillus_leucophaeus
ENSCGRG00001013939	Zfp454	100	83.704	ENSMUSG00000048728	Zfp454	100	88.785	Mus_musculus
ENSCGRG00001013939	Zfp454	98	76.296	ENSMLUG00000002894	ZNF454	100	76.296	Myotis_lucifugus
ENSCGRG00001013939	Zfp454	100	75.410	ENSPANG00000009509	ZNF454	100	75.410	Papio_anubis
ENSCGRG00001013939	Zfp454	99	76.287	ENSSSCG00000027351	ZNF454	99	76.287	Sus_scrofa
ENSCGRG00001013939	Zfp454	80	80.135	ENSUAMG00000026246	ZNF454	100	80.135	Ursus_americanus
ENSCGRG00001013939	Zfp454	90	75.453	ENSUMAG00000023930	ZNF454	95	75.403	Ursus_maritimus
ENSCGRG00001013939	Zfp454	99	74.860	ENSVVUG00000001267	ZNF454	85	74.860	Vulpes_vulpes