EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001014174 (Gene tree)
Gene ID: -
Gene Symbol: Srrm1
Alias: SRm160
Full Name: serine/arginine repetitive matrix 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 33858 bases
Position: chrscaffold_2:18060879-18094736
Accession: 1858303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001012948	PWI	PF01480.17	6.2e-30	1	1
ENSCGRP00001012937	PWI	PF01480.17	6.3e-30	1	1
ENSCGRP00001012924	PWI	PF01480.17	6.4e-30	1	1
ENSCGRP00001012950	PWI	PF01480.17	6.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001017183	-	2649	-	ENSCGRP00001012948	883 (aa)	-	-
ENSCGRT00001017159	-	4134	-	ENSCGRP00001012924	923 (aa)	-	-
ENSCGRT00001017172	-	2718	-	ENSCGRP00001012937	905 (aa)	-	-
ENSCGRT00001017185	-	2805	-	ENSCGRP00001012950	934 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001014174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001014174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001014174	Srrm1	77	95.779	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSCGRG00001014174	Srrm1	56	95.968	ENSCCAG00000029474	SRRM1	96	96.162	Cebus_capucinus
ENSCGRG00001014174	Srrm1	53	95.808	ENSCHOG00000000027	SRRM1	51	95.266	Choloepus_hoffmanni
ENSCGRG00001014174	Srrm1	100	100.000	ENSCGRG00000017603	Srrm1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001014174	Srrm1	60	97.083	ENSMLEG00000038030	-	90	96.964	Mandrillus_leucophaeus
ENSCGRG00001014174	Srrm1	100	98.130	ENSMAUG00000015705	Srrm1	100	98.130	Mesocricetus_auratus
ENSCGRG00001014174	Srrm1	100	97.800	MGP_CAROLIEiJ_G0026636	Srrm1	100	97.800	Mus_caroli
ENSCGRG00001014174	Srrm1	100	97.360	ENSMUSG00000028809	Srrm1	100	97.360	Mus_musculus
ENSCGRG00001014174	Srrm1	100	97.687	MGP_PahariEiJ_G0028969	Srrm1	100	97.687	Mus_pahari
ENSCGRG00001014174	Srrm1	100	97.690	MGP_SPRETEiJ_G0027616	Srrm1	100	97.690	Mus_spretus
ENSCGRG00001014174	Srrm1	100	96.366	ENSNGAG00000014562	Srrm1	100	96.366	Nannospalax_galili
ENSCGRG00001014174	Srrm1	60	97.166	ENSNLEG00000008966	SRRM1	94	97.166	Nomascus_leucogenys
ENSCGRG00001014174	Srrm1	76	77.714	ENSMEUG00000014704	SRRM1	62	91.579	Notamacropus_eugenii
ENSCGRG00001014174	Srrm1	96	95.972	ENSOARG00000006453	SRRM1	99	95.972	Ovis_aries
ENSCGRG00001014174	Srrm1	100	98.018	ENSPEMG00000006254	Srrm1	100	98.018	Peromyscus_maniculatus_bairdii
ENSCGRG00001014174	Srrm1	100	97.467	ENSRNOG00000018194	Srrm1	100	97.467	Rattus_norvegicus
ENSCGRG00001014174	Srrm1	89	93.622	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSCGRG00001014174	Srrm1	61	89.836	ENSSARG00000013718	SRRM1	60	89.836	Sorex_araneus