EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001014305 (Gene tree)
Gene ID: -
Gene Symbol: Cmss1
Alias: 1110001A06Rik|2610528E23Rik|4930572F24Rik
Full Name: cms small ribosomal subunit 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 291765 bases
Position: chrscaffold_8:37801508-38093272
Accession: 1913747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001013064	CMS1	PF14617.6	9.7e-32	1	1
ENSCGRP00001013064	DEAD	PF00270.29	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001017301	-	837	-	ENSCGRP00001013064	278 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001014305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001014305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001014305	Cmss1	100	81.362	ENSG00000184220	CMSS1	98	90.000	Homo_sapiens
ENSCGRG00001014305	Cmss1	73	62.871	ENSAPOG00000010604	cmss1	82	62.871	Acanthochromis_polyacanthus
ENSCGRG00001014305	Cmss1	92	81.641	ENSAMEG00000004092	CMSS1	98	81.641	Ailuropoda_melanoleuca
ENSCGRG00001014305	Cmss1	73	51.980	ENSACIG00000021854	cmss1	75	51.980	Amphilophus_citrinellus
ENSCGRG00001014305	Cmss1	100	49.827	ENSAOCG00000013361	cmss1	100	50.519	Amphiprion_ocellaris
ENSCGRG00001014305	Cmss1	100	50.000	ENSAPEG00000005829	cmss1	100	50.345	Amphiprion_percula
ENSCGRG00001014305	Cmss1	100	50.512	ENSATEG00000008209	cmss1	100	51.546	Anabas_testudineus
ENSCGRG00001014305	Cmss1	82	67.826	ENSAPLG00000010542	CMSS1	100	67.391	Anas_platyrhynchos
ENSCGRG00001014305	Cmss1	92	62.308	ENSACAG00000011065	CMSS1	95	62.308	Anolis_carolinensis
ENSCGRG00001014305	Cmss1	100	80.714	ENSANAG00000023565	CMSS1	100	80.714	Aotus_nancymaae
ENSCGRG00001014305	Cmss1	100	49.141	ENSACLG00000027294	cmss1	100	48.797	Astatotilapia_calliptera
ENSCGRG00001014305	Cmss1	100	45.118	ENSAMXG00000002046	cmss1	100	45.763	Astyanax_mexicanus
ENSCGRG00001014305	Cmss1	100	81.004	ENSBTAG00000013663	CMSS1	100	81.004	Bos_taurus
ENSCGRG00001014305	Cmss1	100	81.429	ENSCJAG00000000610	CMSS1	100	81.429	Callithrix_jacchus
ENSCGRG00001014305	Cmss1	93	82.558	ENSCAFG00000009230	CMSS1	93	82.558	Canis_familiaris
ENSCGRG00001014305	Cmss1	93	82.239	ENSCAFG00020009464	-	95	82.239	Canis_lupus_dingo
ENSCGRG00001014305	Cmss1	83	76.724	ENSCAFG00020024156	-	59	86.243	Canis_lupus_dingo
ENSCGRG00001014305	Cmss1	96	77.985	ENSCHIG00000013003	CMSS1	96	77.985	Capra_hircus
ENSCGRG00001014305	Cmss1	92	79.688	ENSTSYG00000009266	CMSS1	98	79.688	Carlito_syrichta
ENSCGRG00001014305	Cmss1	80	69.432	ENSCAPG00000013584	CMSS1	88	74.872	Cavia_aperea
ENSCGRG00001014305	Cmss1	100	78.853	ENSCPOG00000014680	CMSS1	100	78.853	Cavia_porcellus
ENSCGRG00001014305	Cmss1	100	81.786	ENSCCAG00000034685	CMSS1	100	81.786	Cebus_capucinus
ENSCGRG00001014305	Cmss1	100	82.079	ENSCATG00000031980	CMSS1	100	82.079	Cercocebus_atys
ENSCGRG00001014305	Cmss1	82	83.406	ENSCLAG00000011241	CMSS1	98	83.406	Chinchilla_lanigera
ENSCGRG00001014305	Cmss1	88	84.490	ENSCSAG00000006024	CMSS1	100	84.490	Chlorocebus_sabaeus
ENSCGRG00001014305	Cmss1	100	62.590	ENSCHOG00000012098	CMSS1	100	62.590	Choloepus_hoffmanni
ENSCGRG00001014305	Cmss1	71	42.211	ENSCING00000014848	-	99	43.316	Ciona_intestinalis
ENSCGRG00001014305	Cmss1	100	82.079	ENSCANG00000031337	CMSS1	100	82.079	Colobus_angolensis_palliatus
ENSCGRG00001014305	Cmss1	92	99.611	ENSCGRG00000006722	Cmss1	100	99.611	Cricetulus_griseus_crigri
ENSCGRG00001014305	Cmss1	100	49.667	ENSCSEG00000004958	cmss1	100	48.515	Cynoglossus_semilaevis
ENSCGRG00001014305	Cmss1	100	49.320	ENSCVAG00000005039	cmss1	100	49.660	Cyprinodon_variegatus
ENSCGRG00001014305	Cmss1	100	45.946	ENSDARG00000112579	cmss1	100	46.575	Danio_rerio
ENSCGRG00001014305	Cmss1	92	78.431	ENSDNOG00000040418	CMSS1	91	78.431	Dasypus_novemcinctus
ENSCGRG00001014305	Cmss1	100	81.004	ENSDORG00000010461	Cmss1	100	81.004	Dipodomys_ordii
ENSCGRG00001014305	Cmss1	84	81.545	ENSEASG00005010966	CMSS1	92	85.644	Equus_asinus_asinus
ENSCGRG00001014305	Cmss1	92	79.297	ENSECAG00000015662	CMSS1	100	81.938	Equus_caballus
ENSCGRG00001014305	Cmss1	100	55.197	ENSEEUG00000007624	-	100	55.197	Erinaceus_europaeus
ENSCGRG00001014305	Cmss1	100	50.993	ENSELUG00000019459	cmss1	100	52.333	Esox_lucius
ENSCGRG00001014305	Cmss1	100	83.154	ENSFCAG00000044577	CMSS1	100	83.154	Felis_catus
ENSCGRG00001014305	Cmss1	85	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSCGRG00001014305	Cmss1	82	82.895	ENSFDAG00000012577	CMSS1	100	82.895	Fukomys_damarensis
ENSCGRG00001014305	Cmss1	81	58.696	ENSFHEG00000012008	cmss1	83	61.881	Fundulus_heteroclitus
ENSCGRG00001014305	Cmss1	99	50.177	ENSGMOG00000016729	cmss1	100	50.883	Gadus_morhua
ENSCGRG00001014305	Cmss1	84	67.094	ENSGALG00000015267	CMSS1	90	67.094	Gallus_gallus
ENSCGRG00001014305	Cmss1	74	62.136	ENSGAFG00000021217	cmss1	77	61.881	Gambusia_affinis
ENSCGRG00001014305	Cmss1	99	46.953	ENSGACG00000002798	cmss1	100	46.953	Gasterosteus_aculeatus
ENSCGRG00001014305	Cmss1	93	65.909	ENSGAGG00000019861	CMSS1	99	65.909	Gopherus_agassizii
ENSCGRG00001014305	Cmss1	93	82.171	ENSGGOG00000014125	CMSS1	99	82.171	Gorilla_gorilla
ENSCGRG00001014305	Cmss1	100	48.276	ENSHBUG00000008431	cmss1	100	48.966	Haplochromis_burtoni
ENSCGRG00001014305	Cmss1	90	79.920	ENSHGLG00000019481	CMSS1	98	79.920	Heterocephalus_glaber_female
ENSCGRG00001014305	Cmss1	92	78.988	ENSHGLG00100010314	CMSS1	100	78.988	Heterocephalus_glaber_male
ENSCGRG00001014305	Cmss1	100	50.847	ENSHCOG00000003222	cmss1	100	50.847	Hippocampus_comes
ENSCGRG00001014305	Cmss1	100	47.959	ENSIPUG00000011591	cmss1	100	48.299	Ictalurus_punctatus
ENSCGRG00001014305	Cmss1	100	81.004	ENSSTOG00000019366	CMSS1	100	81.004	Ictidomys_tridecemlineatus
ENSCGRG00001014305	Cmss1	100	79.928	ENSJJAG00000014894	Cmss1	100	79.928	Jaculus_jaculus
ENSCGRG00001014305	Cmss1	79	46.502	ENSKMAG00000002390	cmss1	81	51.980	Kryptolebias_marmoratus
ENSCGRG00001014305	Cmss1	73	57.635	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSCGRG00001014305	Cmss1	82	63.913	ENSLACG00000009293	CMSS1	100	63.043	Latimeria_chalumnae
ENSCGRG00001014305	Cmss1	100	50.000	ENSLOCG00000009391	cmss1	100	50.530	Lepisosteus_oculatus
ENSCGRG00001014305	Cmss1	82	83.333	ENSLAFG00000017509	CMSS1	100	83.333	Loxodonta_africana
ENSCGRG00001014305	Cmss1	100	82.437	ENSMFAG00000045006	CMSS1	100	82.437	Macaca_fascicularis
ENSCGRG00001014305	Cmss1	100	82.079	ENSMMUG00000002939	CMSS1	100	82.079	Macaca_mulatta
ENSCGRG00001014305	Cmss1	100	82.079	ENSMNEG00000031315	CMSS1	100	82.079	Macaca_nemestrina
ENSCGRG00001014305	Cmss1	100	82.079	ENSMLEG00000033660	CMSS1	100	82.079	Mandrillus_leucophaeus
ENSCGRG00001014305	Cmss1	100	51.689	ENSMAMG00000017176	cmss1	100	52.365	Mastacembelus_armatus
ENSCGRG00001014305	Cmss1	100	49.141	ENSMZEG00005021886	cmss1	100	48.797	Maylandia_zebra
ENSCGRG00001014305	Cmss1	82	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCGRG00001014305	Cmss1	100	74.820	ENSMAUG00000020609	Cmss1	100	74.820	Mesocricetus_auratus
ENSCGRG00001014305	Cmss1	100	81.295	ENSMICG00000048977	CMSS1	100	81.295	Microcebus_murinus
ENSCGRG00001014305	Cmss1	100	87.410	ENSMOCG00000021937	Cmss1	100	87.410	Microtus_ochrogaster
ENSCGRG00001014305	Cmss1	73	58.911	ENSMMOG00000019794	cmss1	84	58.911	Mola_mola
ENSCGRG00001014305	Cmss1	92	71.264	ENSMODG00000002275	CMSS1	97	71.264	Monodelphis_domestica
ENSCGRG00001014305	Cmss1	100	50.685	ENSMALG00000004250	cmss1	100	50.685	Monopterus_albus
ENSCGRG00001014305	Cmss1	100	87.814	MGP_CAROLIEiJ_G0020824	Cmss1	100	86.022	Mus_caroli
ENSCGRG00001014305	Cmss1	100	88.889	ENSMUSG00000022748	Cmss1	100	87.097	Mus_musculus
ENSCGRG00001014305	Cmss1	100	87.455	MGP_PahariEiJ_G0016524	Cmss1	100	85.663	Mus_pahari
ENSCGRG00001014305	Cmss1	100	88.172	MGP_SPRETEiJ_G0021724	Cmss1	100	86.380	Mus_spretus
ENSCGRG00001014305	Cmss1	88	85.246	ENSMPUG00000011324	CMSS1	99	83.012	Mustela_putorius_furo
ENSCGRG00001014305	Cmss1	93	82.692	ENSMLUG00000001131	CMSS1	99	82.692	Myotis_lucifugus
ENSCGRG00001014305	Cmss1	100	84.588	ENSNGAG00000020316	Cmss1	100	84.588	Nannospalax_galili
ENSCGRG00001014305	Cmss1	100	48.797	ENSNBRG00000003095	cmss1	100	48.797	Neolamprologus_brichardi
ENSCGRG00001014305	Cmss1	100	82.437	ENSNLEG00000034172	CMSS1	100	82.437	Nomascus_leucogenys
ENSCGRG00001014305	Cmss1	82	62.281	ENSMEUG00000014505	CMSS1	100	62.281	Notamacropus_eugenii
ENSCGRG00001014305	Cmss1	100	82.734	ENSOPRG00000002986	CMSS1	100	82.734	Ochotona_princeps
ENSCGRG00001014305	Cmss1	100	63.669	ENSODEG00000009446	-	100	62.724	Octodon_degus
ENSCGRG00001014305	Cmss1	100	67.626	ENSODEG00000001853	-	100	67.626	Octodon_degus
ENSCGRG00001014305	Cmss1	100	74.733	ENSODEG00000003558	-	100	74.733	Octodon_degus
ENSCGRG00001014305	Cmss1	100	78.853	ENSODEG00000005226	-	100	78.853	Octodon_degus
ENSCGRG00001014305	Cmss1	73	58.911	ENSONIG00000006678	cmss1	77	58.911	Oreochromis_niloticus
ENSCGRG00001014305	Cmss1	91	70.866	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSCGRG00001014305	Cmss1	93	83.333	ENSOCUG00000025366	CMSS1	93	83.333	Oryctolagus_cuniculus
ENSCGRG00001014305	Cmss1	100	52.778	ENSORLG00000020340	cmss1	100	53.242	Oryzias_latipes
ENSCGRG00001014305	Cmss1	82	51.965	ENSORLG00020012235	cmss1	85	54.950	Oryzias_latipes_hni
ENSCGRG00001014305	Cmss1	73	55.941	ENSORLG00015015551	cmss1	75	55.941	Oryzias_latipes_hsok
ENSCGRG00001014305	Cmss1	100	53.767	ENSOMEG00000012555	cmss1	100	54.452	Oryzias_melastigma
ENSCGRG00001014305	Cmss1	82	84.649	ENSOGAG00000002045	CMSS1	100	84.649	Otolemur_garnettii
ENSCGRG00001014305	Cmss1	92	80.545	ENSOARG00000017899	CMSS1	88	80.545	Ovis_aries
ENSCGRG00001014305	Cmss1	97	79.554	ENSPPAG00000038515	CMSS1	99	79.554	Pan_paniscus
ENSCGRG00001014305	Cmss1	100	82.437	ENSPPRG00000016767	CMSS1	100	82.437	Panthera_pardus
ENSCGRG00001014305	Cmss1	100	82.079	ENSPTIG00000018274	CMSS1	100	82.079	Panthera_tigris_altaica
ENSCGRG00001014305	Cmss1	100	81.004	ENSPTRG00000015157	CMSS1	100	83.265	Pan_troglodytes
ENSCGRG00001014305	Cmss1	93	79.457	ENSPANG00000019980	CMSS1	99	79.457	Papio_anubis
ENSCGRG00001014305	Cmss1	91	54.615	ENSPKIG00000012609	cmss1	97	55.212	Paramormyrops_kingsleyae
ENSCGRG00001014305	Cmss1	82	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSCGRG00001014305	Cmss1	85	55.508	ENSPMGG00000010286	cmss1	100	55.508	Periophthalmus_magnuspinnatus
ENSCGRG00001014305	Cmss1	100	90.000	ENSPEMG00000016384	Cmss1	100	90.000	Peromyscus_maniculatus_bairdii
ENSCGRG00001014305	Cmss1	73	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSCGRG00001014305	Cmss1	92	70.930	ENSPCIG00000015656	CMSS1	98	70.930	Phascolarctos_cinereus
ENSCGRG00001014305	Cmss1	100	49.310	ENSPFOG00000016849	cmss1	100	50.871	Poecilia_formosa
ENSCGRG00001014305	Cmss1	100	48.966	ENSPLAG00000008323	cmss1	100	50.523	Poecilia_latipinna
ENSCGRG00001014305	Cmss1	100	48.973	ENSPMEG00000021020	cmss1	100	51.389	Poecilia_mexicana
ENSCGRG00001014305	Cmss1	73	60.891	ENSPREG00000007618	cmss1	69	60.891	Poecilia_reticulata
ENSCGRG00001014305	Cmss1	100	82.079	ENSPPYG00000013606	CMSS1	100	82.079	Pongo_abelii
ENSCGRG00001014305	Cmss1	100	81.655	ENSPCOG00000020035	CMSS1	100	81.655	Propithecus_coquereli
ENSCGRG00001014305	Cmss1	100	71.326	ENSPVAG00000017031	CMSS1	100	71.326	Pteropus_vampyrus
ENSCGRG00001014305	Cmss1	91	49.811	ENSPNYG00000013428	cmss1	97	49.434	Pundamilia_nyererei
ENSCGRG00001014305	Cmss1	100	48.515	ENSPNAG00000007912	cmss1	100	48.013	Pygocentrus_nattereri
ENSCGRG00001014305	Cmss1	93	87.259	ENSRNOG00000027888	Cmss1	99	85.714	Rattus_norvegicus
ENSCGRG00001014305	Cmss1	100	81.362	ENSRBIG00000037931	CMSS1	100	81.362	Rhinopithecus_bieti
ENSCGRG00001014305	Cmss1	100	81.362	ENSRROG00000042910	CMSS1	100	81.362	Rhinopithecus_roxellana
ENSCGRG00001014305	Cmss1	92	82.353	ENSSBOG00000030980	CMSS1	97	82.353	Saimiri_boliviensis_boliviensis
ENSCGRG00001014305	Cmss1	89	71.032	ENSSHAG00000009321	CMSS1	99	71.032	Sarcophilus_harrisii
ENSCGRG00001014305	Cmss1	100	53.401	ENSSFOG00015001509	cmss1	100	54.138	Scleropages_formosus
ENSCGRG00001014305	Cmss1	100	51.546	ENSSMAG00000001653	cmss1	100	50.000	Scophthalmus_maximus
ENSCGRG00001014305	Cmss1	100	51.864	ENSSDUG00000007719	cmss1	100	53.448	Seriola_dumerili
ENSCGRG00001014305	Cmss1	74	63.107	ENSSLDG00000012300	cmss1	68	62.871	Seriola_lalandi_dorsalis
ENSCGRG00001014305	Cmss1	100	67.972	ENSSARG00000003584	CMSS1	100	67.972	Sorex_araneus
ENSCGRG00001014305	Cmss1	81	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSCGRG00001014305	Cmss1	74	62.621	ENSSPAG00000019182	cmss1	63	62.376	Stegastes_partitus
ENSCGRG00001014305	Cmss1	100	83.154	ENSSSCG00000011970	CMSS1	100	83.154	Sus_scrofa
ENSCGRG00001014305	Cmss1	82	65.066	ENSTGUG00000013635	CMSS1	100	65.066	Taeniopygia_guttata
ENSCGRG00001014305	Cmss1	100	48.123	ENSTRUG00000015265	cmss1	100	49.470	Takifugu_rubripes
ENSCGRG00001014305	Cmss1	73	54.455	ENSTNIG00000002880	cmss1	73	54.455	Tetraodon_nigroviridis
ENSCGRG00001014305	Cmss1	100	54.643	ENSTBEG00000016722	CMSS1	100	54.643	Tupaia_belangeri
ENSCGRG00001014305	Cmss1	100	79.211	ENSTTRG00000001562	CMSS1	100	79.211	Tursiops_truncatus
ENSCGRG00001014305	Cmss1	97	79.121	ENSUAMG00000024209	CMSS1	100	85.650	Ursus_americanus
ENSCGRG00001014305	Cmss1	93	81.081	ENSUMAG00000001983	CMSS1	98	81.961	Ursus_maritimus
ENSCGRG00001014305	Cmss1	100	63.082	ENSVPAG00000000263	CMSS1	100	63.082	Vicugna_pacos
ENSCGRG00001014305	Cmss1	88	83.740	ENSVVUG00000021647	-	100	83.740	Vulpes_vulpes
ENSCGRG00001014305	Cmss1	78	84.332	ENSVVUG00000007776	-	80	87.129	Vulpes_vulpes
ENSCGRG00001014305	Cmss1	100	55.674	ENSXETG00000011858	cmss1	100	55.319	Xenopus_tropicalis
ENSCGRG00001014305	Cmss1	74	61.650	ENSXCOG00000018724	cmss1	69	61.386	Xiphophorus_couchianus
ENSCGRG00001014305	Cmss1	74	61.650	ENSXMAG00000011243	cmss1	76	61.386	Xiphophorus_maculatus