EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001014397 (Gene tree)
Gene ID: -
Gene Symbol: Arid4b
Alias: 6330417L24Rik|6720480E17Rik|BRCAA1|RBBP1L1|Rbp1l1|SAP180
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Plus strand
Length: 128395 bases
Position: chrscaffold_6:31300116-31428510
Accession: 100752333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001013223	Tudor-knot	PF11717.8	9.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001017460	-	5863	XM_003506413	ENSCGRP00001013223	1313 (aa)	XP_003506461	UPI0004546668
ENSCGRT00001017484	-	1419	-	ENSCGRP00001013247	472 (aa)	-	-
ENSCGRT00001017476	-	3678	-	ENSCGRP00001013239	1225 (aa)	XP_007630827	UPI00045498BD

Gene Model

Click here to download ENSCGRG00001014397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001014397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001014397	Arid4b	100	90.881	ENSG00000054267	ARID4B	100	94.203	Homo_sapiens
ENSCGRG00001014397	Arid4b	99	90.722	ENSAMEG00000008801	ARID4B	100	90.190	Ailuropoda_melanoleuca
ENSCGRG00001014397	Arid4b	89	73.544	ENSACIG00000006313	tomm20a	98	72.816	Amphilophus_citrinellus
ENSCGRG00001014397	Arid4b	99	52.544	ENSAOCG00000003330	tomm20a	52	60.468	Amphiprion_ocellaris
ENSCGRG00001014397	Arid4b	99	52.471	ENSAPEG00000024018	tomm20a	52	60.798	Amphiprion_percula
ENSCGRG00001014397	Arid4b	99	52.616	ENSATEG00000014930	tomm20a	100	51.435	Anabas_testudineus
ENSCGRG00001014397	Arid4b	100	76.431	ENSAPLG00000004422	ARID4B	100	76.187	Anas_platyrhynchos
ENSCGRG00001014397	Arid4b	99	71.742	ENSACAG00000001289	ARID4B	100	72.273	Anolis_carolinensis
ENSCGRG00001014397	Arid4b	100	91.033	ENSANAG00000038088	ARID4B	100	90.881	Aotus_nancymaae
ENSCGRG00001014397	Arid4b	89	64.634	ENSACLG00000023521	tomm20a	98	64.634	Astatotilapia_calliptera
ENSCGRG00001014397	Arid4b	72	89.333	ENSAMXG00000003657	tomm20a	86	67.229	Astyanax_mexicanus
ENSCGRG00001014397	Arid4b	100	88.830	ENSBTAG00000000222	ARID4B	100	88.298	Bos_taurus
ENSCGRG00001014397	Arid4b	100	90.266	ENSCJAG00000018055	ARID4B	100	90.266	Callithrix_jacchus
ENSCGRG00001014397	Arid4b	100	90.805	ENSCAFG00000011439	ARID4B	100	90.274	Canis_familiaris
ENSCGRG00001014397	Arid4b	99	90.443	ENSCAFG00020027130	ARID4B	99	89.908	Canis_lupus_dingo
ENSCGRG00001014397	Arid4b	99	86.020	ENSCHIG00000020742	ARID4B	100	86.020	Capra_hircus
ENSCGRG00001014397	Arid4b	100	90.653	ENSTSYG00000010028	ARID4B	100	90.578	Carlito_syrichta
ENSCGRG00001014397	Arid4b	99	88.737	ENSCPOG00000034766	ARID4B	100	88.661	Cavia_porcellus
ENSCGRG00001014397	Arid4b	100	90.805	ENSCCAG00000021520	ARID4B	100	90.653	Cebus_capucinus
ENSCGRG00001014397	Arid4b	100	91.261	ENSCATG00000042166	ARID4B	100	91.109	Cercocebus_atys
ENSCGRG00001014397	Arid4b	100	90.350	ENSCLAG00000003255	ARID4B	100	90.122	Chinchilla_lanigera
ENSCGRG00001014397	Arid4b	100	91.565	ENSCSAG00000010069	ARID4B	100	91.413	Chlorocebus_sabaeus
ENSCGRG00001014397	Arid4b	76	100.000	ENSCHOG00000001152	ARID4B	76	100.000	Choloepus_hoffmanni
ENSCGRG00001014397	Arid4b	100	75.623	ENSCPBG00000004501	ARID4B	100	76.226	Chrysemys_picta_bellii
ENSCGRG00001014397	Arid4b	100	87.614	ENSCANG00000027498	ARID4B	100	82.003	Colobus_angolensis_palliatus
ENSCGRG00001014397	Arid4b	99	100.000	ENSCGRG00000004910	Arid4b	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001014397	Arid4b	99	52.907	ENSCSEG00000012928	tomm20a	100	52.052	Cynoglossus_semilaevis
ENSCGRG00001014397	Arid4b	56	89.367	ENSDNOG00000005711	ARID4B	100	89.367	Dasypus_novemcinctus
ENSCGRG00001014397	Arid4b	99	90.861	ENSDORG00000006422	Arid4b	100	90.327	Dipodomys_ordii
ENSCGRG00001014397	Arid4b	89	89.052	ENSETEG00000005596	ARID4B	92	88.487	Echinops_telfairi
ENSCGRG00001014397	Arid4b	99	89.346	ENSEASG00005000677	ARID4B	99	89.269	Equus_asinus_asinus
ENSCGRG00001014397	Arid4b	99	90.791	ENSECAG00000017836	ARID4B	99	90.259	Equus_caballus
ENSCGRG00001014397	Arid4b	83	97.222	ENSEEUG00000005378	ARID4B	86	97.222	Erinaceus_europaeus
ENSCGRG00001014397	Arid4b	100	89.666	ENSFCAG00000030096	ARID4B	100	89.438	Felis_catus
ENSCGRG00001014397	Arid4b	100	77.358	ENSFALG00000013548	ARID4B	98	77.132	Ficedula_albicollis
ENSCGRG00001014397	Arid4b	99	89.650	ENSFDAG00000014194	ARID4B	100	88.889	Fukomys_damarensis
ENSCGRG00001014397	Arid4b	54	60.773	ENSFHEG00000003798	tomm20a	54	61.247	Fundulus_heteroclitus
ENSCGRG00001014397	Arid4b	90	52.729	ENSGMOG00000018747	tomm20a	92	52.012	Gadus_morhua
ENSCGRG00001014397	Arid4b	99	53.003	ENSGACG00000004298	tomm20a	100	51.959	Gasterosteus_aculeatus
ENSCGRG00001014397	Arid4b	100	74.642	ENSGAGG00000020544	ARID4B	98	78.743	Gopherus_agassizii
ENSCGRG00001014397	Arid4b	100	91.489	ENSGGOG00000022080	ARID4B	100	90.957	Gorilla_gorilla
ENSCGRG00001014397	Arid4b	100	89.894	ENSHGLG00000012546	ARID4B	100	89.134	Heterocephalus_glaber_female
ENSCGRG00001014397	Arid4b	100	89.894	ENSHGLG00100015436	ARID4B	100	89.134	Heterocephalus_glaber_male
ENSCGRG00001014397	Arid4b	91	73.850	ENSHCOG00000010376	tomm20a	95	74.029	Hippocampus_comes
ENSCGRG00001014397	Arid4b	100	91.489	ENSSTOG00000002810	ARID4B	100	91.489	Ictidomys_tridecemlineatus
ENSCGRG00001014397	Arid4b	100	88.450	ENSJJAG00000021368	Arid4b	100	87.994	Jaculus_jaculus
ENSCGRG00001014397	Arid4b	88	54.028	ENSKMAG00000010987	tomm20a	98	52.133	Kryptolebias_marmoratus
ENSCGRG00001014397	Arid4b	99	89.422	ENSLAFG00000014295	ARID4B	100	89.193	Loxodonta_africana
ENSCGRG00001014397	Arid4b	100	91.413	ENSMFAG00000044016	ARID4B	100	91.261	Macaca_fascicularis
ENSCGRG00001014397	Arid4b	100	91.413	ENSMMUG00000007141	ARID4B	100	91.261	Macaca_mulatta
ENSCGRG00001014397	Arid4b	100	91.185	ENSMNEG00000014840	ARID4B	100	91.109	Macaca_nemestrina
ENSCGRG00001014397	Arid4b	99	91.215	ENSMLEG00000033583	ARID4B	100	91.062	Mandrillus_leucophaeus
ENSCGRG00001014397	Arid4b	94	50.732	ENSMAMG00000017134	tomm20a	99	50.850	Mastacembelus_armatus
ENSCGRG00001014397	Arid4b	100	77.208	ENSMGAG00000011896	ARID4B	100	77.358	Meleagris_gallopavo
ENSCGRG00001014397	Arid4b	100	91.800	ENSMICG00000016358	ARID4B	100	91.800	Microcebus_murinus
ENSCGRG00001014397	Arid4b	87	75.787	ENSMMOG00000000561	tomm20a	69	74.757	Mola_mola
ENSCGRG00001014397	Arid4b	100	83.308	ENSMODG00000008417	ARID4B	100	82.777	Monodelphis_domestica
ENSCGRG00001014397	Arid4b	100	94.525	MGP_CAROLIEiJ_G0018236	Arid4b	100	94.297	Mus_caroli
ENSCGRG00001014397	Arid4b	100	93.916	ENSMUSG00000039219	Arid4b	100	93.688	Mus_musculus
ENSCGRG00001014397	Arid4b	100	94.601	MGP_PahariEiJ_G0019286	Arid4b	100	94.373	Mus_pahari
ENSCGRG00001014397	Arid4b	100	93.916	MGP_SPRETEiJ_G0019094	Arid4b	100	93.688	Mus_spretus
ENSCGRG00001014397	Arid4b	100	89.742	ENSMPUG00000002906	ARID4B	100	89.362	Mustela_putorius_furo
ENSCGRG00001014397	Arid4b	99	87.396	ENSMLUG00000016232	ARID4B	100	86.712	Myotis_lucifugus
ENSCGRG00001014397	Arid4b	100	90.840	ENSNGAG00000014629	Arid4b	100	90.083	Nannospalax_galili
ENSCGRG00001014397	Arid4b	89	73.966	ENSNBRG00000019684	tomm20a	98	73.966	Neolamprologus_brichardi
ENSCGRG00001014397	Arid4b	100	91.109	ENSNLEG00000002665	ARID4B	100	90.957	Nomascus_leucogenys
ENSCGRG00001014397	Arid4b	100	89.894	ENSODEG00000005373	ARID4B	100	89.362	Octodon_degus
ENSCGRG00001014397	Arid4b	99	91.629	ENSOCUG00000006605	ARID4B	100	91.096	Oryctolagus_cuniculus
ENSCGRG00001014397	Arid4b	89	74.519	ENSORLG00020013988	tomm20a	72	74.217	Oryzias_latipes_hni
ENSCGRG00001014397	Arid4b	89	75.121	ENSORLG00015022835	tomm20a	99	74.818	Oryzias_latipes_hsok
ENSCGRG00001014397	Arid4b	99	81.886	ENSOGAG00000012476	ARID4B	55	81.660	Otolemur_garnettii
ENSCGRG00001014397	Arid4b	99	87.890	ENSOARG00000003481	ARID4B	97	87.510	Ovis_aries
ENSCGRG00001014397	Arid4b	100	91.413	ENSPPAG00000031651	ARID4B	100	91.337	Pan_paniscus
ENSCGRG00001014397	Arid4b	100	89.818	ENSPPRG00000013739	ARID4B	100	89.286	Panthera_pardus
ENSCGRG00001014397	Arid4b	100	87.994	ENSPTIG00000012520	ARID4B	100	87.462	Panthera_tigris_altaica
ENSCGRG00001014397	Arid4b	86	89.362	ENSPTRG00000048786	-	96	89.273	Pan_troglodytes
ENSCGRG00001014397	Arid4b	100	91.413	ENSPTRG00000002129	ARID4B	100	91.337	Pan_troglodytes
ENSCGRG00001014397	Arid4b	99	90.791	ENSPANG00000013611	ARID4B	100	90.639	Papio_anubis
ENSCGRG00001014397	Arid4b	93	75.586	ENSPSIG00000011632	ARID4B	99	75.728	Pelodiscus_sinensis
ENSCGRG00001014397	Arid4b	92	90.364	ENSPCIG00000029756	ARID4B	100	82.170	Phascolarctos_cinereus
ENSCGRG00001014397	Arid4b	99	51.345	ENSPFOG00000019430	tomm20a	100	50.840	Poecilia_formosa
ENSCGRG00001014397	Arid4b	100	91.337	ENSPPYG00000000098	ARID4B	100	91.261	Pongo_abelii
ENSCGRG00001014397	Arid4b	100	92.325	ENSPCOG00000024328	ARID4B	100	92.249	Propithecus_coquereli
ENSCGRG00001014397	Arid4b	100	85.790	ENSPVAG00000015159	ARID4B	100	84.802	Pteropus_vampyrus
ENSCGRG00001014397	Arid4b	87	93.304	ENSRNOG00000016391	LOC100912163	97	93.217	Rattus_norvegicus
ENSCGRG00001014397	Arid4b	99	83.486	ENSRBIG00000042029	ARID4B	100	83.029	Rhinopithecus_bieti
ENSCGRG00001014397	Arid4b	100	91.337	ENSRROG00000045203	ARID4B	100	91.185	Rhinopithecus_roxellana
ENSCGRG00001014397	Arid4b	83	89.762	ENSSBOG00000020196	ARID4B	100	89.580	Saimiri_boliviensis_boliviensis
ENSCGRG00001014397	Arid4b	100	82.500	ENSSHAG00000015214	ARID4B	100	83.333	Sarcophilus_harrisii
ENSCGRG00001014397	Arid4b	54	58.252	ENSSFOG00015000132	arid4b	51	59.593	Scleropages_formosus
ENSCGRG00001014397	Arid4b	76	41.595	ENSSFOG00015008923	tomm20a	100	41.929	Scleropages_formosus
ENSCGRG00001014397	Arid4b	99	52.890	ENSSDUG00000003019	tomm20a	100	51.638	Seriola_dumerili
ENSCGRG00001014397	Arid4b	100	75.906	ENSSPUG00000015466	ARID4B	98	75.755	Sphenodon_punctatus
ENSCGRG00001014397	Arid4b	99	52.582	ENSSPAG00000007358	tomm20a	100	52.152	Stegastes_partitus
ENSCGRG00001014397	Arid4b	100	89.590	ENSSSCG00000010156	ARID4B	100	89.058	Sus_scrofa
ENSCGRG00001014397	Arid4b	100	77.769	ENSTGUG00000010246	ARID4B	100	77.011	Taeniopygia_guttata
ENSCGRG00001014397	Arid4b	56	46.515	ENSTRUG00000002893	tomm20a	85	45.421	Takifugu_rubripes
ENSCGRG00001014397	Arid4b	80	84.368	ENSTBEG00000003961	ARID4B	80	82.869	Tupaia_belangeri
ENSCGRG00001014397	Arid4b	100	89.742	ENSTTRG00000002228	ARID4B	100	88.830	Tursiops_truncatus
ENSCGRG00001014397	Arid4b	99	89.607	ENSUMAG00000006905	ARID4B	100	88.906	Ursus_maritimus
ENSCGRG00001014397	Arid4b	69	93.000	ENSVPAG00000006841	ARID4B	69	93.000	Vicugna_pacos
ENSCGRG00001014397	Arid4b	99	89.761	ENSVVUG00000008154	ARID4B	99	89.299	Vulpes_vulpes