EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001014829 (Gene tree)
Gene ID: -
Gene Symbol: Thumpd1
Alias: 6330575P11Rik
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 6482 bases
Position: chrscaffold_9:13842836-13849317
Accession: 100754766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001013791	THUMP	PF02926.17	7.8e-24	1	1
ENSCGRP00001013787	THUMP	PF02926.17	7.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001018028	-	1062	-	ENSCGRP00001013791	353 (aa)	-	-
ENSCGRT00001018024	-	2866	XM_003515248	ENSCGRP00001013787	359 (aa)	XP_003515296	G3ILG2

Gene Model

Click here to download ENSCGRG00001014829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001014829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001014829	Thumpd1	100	83.616	ENSG00000066654	THUMPD1	93	91.852	Homo_sapiens
ENSCGRG00001014829	Thumpd1	73	60.547	ENSAPOG00000008440	thumpd1	89	56.997	Acanthochromis_polyacanthus
ENSCGRG00001014829	Thumpd1	100	84.078	ENSAMEG00000006257	THUMPD1	99	84.078	Ailuropoda_melanoleuca
ENSCGRG00001014829	Thumpd1	76	59.701	ENSACIG00000024395	thumpd1	79	59.701	Amphilophus_citrinellus
ENSCGRG00001014829	Thumpd1	78	55.674	ENSAOCG00000003509	thumpd1	84	57.092	Amphiprion_ocellaris
ENSCGRG00001014829	Thumpd1	90	51.235	ENSAPEG00000010515	thumpd1	98	52.469	Amphiprion_percula
ENSCGRG00001014829	Thumpd1	85	54.248	ENSATEG00000004737	thumpd1	94	54.248	Anabas_testudineus
ENSCGRG00001014829	Thumpd1	69	79.839	ENSAPLG00000015259	THUMPD1	87	81.048	Anas_platyrhynchos
ENSCGRG00001014829	Thumpd1	85	63.057	ENSACAG00000009625	-	94	67.774	Anolis_carolinensis
ENSCGRG00001014829	Thumpd1	100	82.768	ENSANAG00000026882	-	100	82.768	Aotus_nancymaae
ENSCGRG00001014829	Thumpd1	100	67.232	ENSANAG00000027040	-	100	67.232	Aotus_nancymaae
ENSCGRG00001014829	Thumpd1	99	66.952	ENSANAG00000027311	-	100	66.952	Aotus_nancymaae
ENSCGRG00001014829	Thumpd1	73	58.238	ENSACLG00000004830	thumpd1	79	60.000	Astatotilapia_calliptera
ENSCGRG00001014829	Thumpd1	95	52.522	ENSAMXG00000012356	thumpd1	98	52.522	Astyanax_mexicanus
ENSCGRG00001014829	Thumpd1	99	83.754	ENSBTAG00000047673	THUMPD1	100	83.754	Bos_taurus
ENSCGRG00001014829	Thumpd1	96	83.235	ENSCJAG00000009499	THUMPD1	100	82.768	Callithrix_jacchus
ENSCGRG00001014829	Thumpd1	100	83.799	ENSCAFG00000017985	THUMPD1	99	83.799	Canis_familiaris
ENSCGRG00001014829	Thumpd1	100	83.799	ENSCAFG00020021861	THUMPD1	99	83.799	Canis_lupus_dingo
ENSCGRG00001014829	Thumpd1	99	83.473	ENSCHIG00000010134	THUMPD1	99	83.473	Capra_hircus
ENSCGRG00001014829	Thumpd1	100	85.070	ENSTSYG00000011537	THUMPD1	100	85.070	Carlito_syrichta
ENSCGRG00001014829	Thumpd1	96	83.871	ENSCPOG00000023684	-	100	83.380	Cavia_porcellus
ENSCGRG00001014829	Thumpd1	96	83.871	ENSCPOG00000008919	-	100	83.380	Cavia_porcellus
ENSCGRG00001014829	Thumpd1	100	77.684	ENSCCAG00000019379	-	86	77.684	Cebus_capucinus
ENSCGRG00001014829	Thumpd1	100	82.486	ENSCCAG00000030205	THUMPD1	100	82.486	Cebus_capucinus
ENSCGRG00001014829	Thumpd1	100	83.616	ENSCATG00000040309	THUMPD1	100	83.616	Cercocebus_atys
ENSCGRG00001014829	Thumpd1	99	68.436	ENSCATG00000020844	-	99	68.436	Cercocebus_atys
ENSCGRG00001014829	Thumpd1	100	82.486	ENSCLAG00000016508	THUMPD1	100	82.486	Chinchilla_lanigera
ENSCGRG00001014829	Thumpd1	99	83.569	ENSCSAG00000007610	THUMPD1	99	83.569	Chlorocebus_sabaeus
ENSCGRG00001014829	Thumpd1	100	65.922	ENSCSAG00000009860	-	80	65.922	Chlorocebus_sabaeus
ENSCGRG00001014829	Thumpd1	100	81.844	ENSCHOG00000005587	THUMPD1	100	81.844	Choloepus_hoffmanni
ENSCGRG00001014829	Thumpd1	99	65.341	ENSCPBG00000019055	THUMPD1	91	65.341	Chrysemys_picta_bellii
ENSCGRG00001014829	Thumpd1	87	72.816	ENSCANG00000035822	-	100	72.816	Colobus_angolensis_palliatus
ENSCGRG00001014829	Thumpd1	87	75.570	ENSCANG00000038770	THUMPD1	100	75.570	Colobus_angolensis_palliatus
ENSCGRG00001014829	Thumpd1	100	100.000	ENSCGRG00000000060	Thumpd1	100	100.000	Cricetulus_griseus_crigri
ENSCGRG00001014829	Thumpd1	75	58.209	ENSCSEG00000002041	thumpd1	84	58.712	Cynoglossus_semilaevis
ENSCGRG00001014829	Thumpd1	72	62.308	ENSCVAG00000014960	thumpd1	95	54.434	Cyprinodon_variegatus
ENSCGRG00001014829	Thumpd1	92	48.538	ENSDARG00000100264	thumpd1	98	48.688	Danio_rerio
ENSCGRG00001014829	Thumpd1	100	82.961	ENSDNOG00000043510	THUMPD1	100	82.961	Dasypus_novemcinctus
ENSCGRG00001014829	Thumpd1	100	80.223	ENSDORG00000028216	Thumpd1	100	80.223	Dipodomys_ordii
ENSCGRG00001014829	Thumpd1	78	34.130	FBgn0035532	CG15014	89	33.123	Drosophila_melanogaster
ENSCGRG00001014829	Thumpd1	100	74.167	ENSETEG00000002763	THUMPD1	84	74.444	Echinops_telfairi
ENSCGRG00001014829	Thumpd1	73	43.657	ENSEBUG00000011011	THUMPD1	72	43.657	Eptatretus_burgeri
ENSCGRG00001014829	Thumpd1	54	75.635	ENSEASG00005017428	-	100	75.635	Equus_asinus_asinus
ENSCGRG00001014829	Thumpd1	100	81.844	ENSECAG00000005354	THUMPD1	100	81.844	Equus_caballus
ENSCGRG00001014829	Thumpd1	100	81.543	ENSEEUG00000011256	THUMPD1	88	81.818	Erinaceus_europaeus
ENSCGRG00001014829	Thumpd1	81	56.463	ENSELUG00000013612	thumpd1	65	59.643	Esox_lucius
ENSCGRG00001014829	Thumpd1	100	84.637	ENSFCAG00000039296	THUMPD1	100	84.637	Felis_catus
ENSCGRG00001014829	Thumpd1	64	80.349	ENSFALG00000014029	THUMPD1	82	81.659	Ficedula_albicollis
ENSCGRG00001014829	Thumpd1	73	58.301	ENSFHEG00000013319	thumpd1	96	51.026	Fundulus_heteroclitus
ENSCGRG00001014829	Thumpd1	72	62.745	ENSGMOG00000003369	thumpd1	80	62.745	Gadus_morhua
ENSCGRG00001014829	Thumpd1	51	71.823	ENSGALG00000031384	-	66	82.000	Gallus_gallus
ENSCGRG00001014829	Thumpd1	74	58.088	ENSGAFG00000011000	thumpd1	83	58.824	Gambusia_affinis
ENSCGRG00001014829	Thumpd1	72	63.529	ENSGACG00000019511	thumpd1	76	63.529	Gasterosteus_aculeatus
ENSCGRG00001014829	Thumpd1	90	69.497	ENSGAGG00000008225	THUMPD1	98	69.497	Gopherus_agassizii
ENSCGRG00001014829	Thumpd1	96	59.882	ENSGGOG00000043232	-	100	60.057	Gorilla_gorilla
ENSCGRG00001014829	Thumpd1	100	83.333	ENSGGOG00000005231	-	80	83.333	Gorilla_gorilla
ENSCGRG00001014829	Thumpd1	73	58.238	ENSHBUG00000017996	thumpd1	79	59.615	Haplochromis_burtoni
ENSCGRG00001014829	Thumpd1	60	71.963	ENSHGLG00000000952	-	100	71.963	Heterocephalus_glaber_female
ENSCGRG00001014829	Thumpd1	100	83.380	ENSHGLG00000011001	-	100	83.380	Heterocephalus_glaber_female
ENSCGRG00001014829	Thumpd1	60	71.963	ENSHGLG00100010577	-	100	71.963	Heterocephalus_glaber_male
ENSCGRG00001014829	Thumpd1	100	83.944	ENSHGLG00100016023	THUMPD1	100	83.944	Heterocephalus_glaber_male
ENSCGRG00001014829	Thumpd1	69	55.738	ENSHCOG00000008618	thumpd1	56	55.738	Hippocampus_comes
ENSCGRG00001014829	Thumpd1	66	60.776	ENSIPUG00000012500	thumpd1	62	56.391	Ictalurus_punctatus
ENSCGRG00001014829	Thumpd1	100	87.853	ENSSTOG00000007011	THUMPD1	100	87.853	Ictidomys_tridecemlineatus
ENSCGRG00001014829	Thumpd1	100	82.768	ENSJJAG00000004295	-	100	82.768	Jaculus_jaculus
ENSCGRG00001014829	Thumpd1	73	53.232	ENSKMAG00000009545	thumpd1	81	46.765	Kryptolebias_marmoratus
ENSCGRG00001014829	Thumpd1	80	58.657	ENSLBEG00000009349	thumpd1	84	58.657	Labrus_bergylta
ENSCGRG00001014829	Thumpd1	74	65.625	ENSLACG00000005833	THUMPD1	85	62.222	Latimeria_chalumnae
ENSCGRG00001014829	Thumpd1	86	58.117	ENSLOCG00000000854	thumpd1	96	58.766	Lepisosteus_oculatus
ENSCGRG00001014829	Thumpd1	100	83.520	ENSLAFG00000025838	THUMPD1	100	83.520	Loxodonta_africana
ENSCGRG00001014829	Thumpd1	87	69.231	ENSMFAG00000041474	-	100	69.231	Macaca_fascicularis
ENSCGRG00001014829	Thumpd1	100	83.616	ENSMFAG00000036996	THUMPD1	100	83.616	Macaca_fascicularis
ENSCGRG00001014829	Thumpd1	100	83.616	ENSMMUG00000004225	THUMPD1	100	83.616	Macaca_mulatta
ENSCGRG00001014829	Thumpd1	87	68.910	ENSMMUG00000038414	-	100	68.910	Macaca_mulatta
ENSCGRG00001014829	Thumpd1	100	83.616	ENSMNEG00000020726	THUMPD1	100	83.616	Macaca_nemestrina
ENSCGRG00001014829	Thumpd1	87	68.910	ENSMNEG00000038856	-	100	68.910	Macaca_nemestrina
ENSCGRG00001014829	Thumpd1	100	83.616	ENSMLEG00000036436	THUMPD1	100	83.616	Mandrillus_leucophaeus
ENSCGRG00001014829	Thumpd1	87	69.677	ENSMLEG00000030012	-	99	69.677	Mandrillus_leucophaeus
ENSCGRG00001014829	Thumpd1	80	58.865	ENSMAMG00000006858	thumpd1	99	53.754	Mastacembelus_armatus
ENSCGRG00001014829	Thumpd1	73	58.238	ENSMZEG00005013693	thumpd1	79	59.615	Maylandia_zebra
ENSCGRG00001014829	Thumpd1	53	84.492	ENSMGAG00000010340	THUMPD1	91	84.492	Meleagris_gallopavo
ENSCGRG00001014829	Thumpd1	100	95.751	ENSMAUG00000013306	Thumpd1	100	95.751	Mesocricetus_auratus
ENSCGRG00001014829	Thumpd1	99	66.292	ENSMICG00000030865	-	96	66.292	Microcebus_murinus
ENSCGRG00001014829	Thumpd1	100	86.723	ENSMICG00000038483	-	100	86.723	Microcebus_murinus
ENSCGRG00001014829	Thumpd1	100	93.484	ENSMOCG00000003447	Thumpd1	100	93.484	Microtus_ochrogaster
ENSCGRG00001014829	Thumpd1	73	59.231	ENSMMOG00000011323	thumpd1	76	59.231	Mola_mola
ENSCGRG00001014829	Thumpd1	99	72.527	ENSMODG00000006971	-	98	73.352	Monodelphis_domestica
ENSCGRG00001014829	Thumpd1	99	71.978	ENSMODG00000024776	-	99	73.352	Monodelphis_domestica
ENSCGRG00001014829	Thumpd1	73	60.547	ENSMALG00000019522	thumpd1	97	54.487	Monopterus_albus
ENSCGRG00001014829	Thumpd1	100	88.385	MGP_CAROLIEiJ_G0030382	Thumpd1	100	88.385	Mus_caroli
ENSCGRG00001014829	Thumpd1	100	89.235	ENSMUSG00000030942	Thumpd1	100	89.235	Mus_musculus
ENSCGRG00001014829	Thumpd1	100	87.887	MGP_PahariEiJ_G0013593	Thumpd1	100	87.887	Mus_pahari
ENSCGRG00001014829	Thumpd1	90	83.801	ENSMLUG00000010547	THUMPD1	90	83.801	Myotis_lucifugus
ENSCGRG00001014829	Thumpd1	99	88.952	ENSNGAG00000018643	Thumpd1	100	88.952	Nannospalax_galili
ENSCGRG00001014829	Thumpd1	73	58.238	ENSNBRG00000006987	thumpd1	96	48.980	Neolamprologus_brichardi
ENSCGRG00001014829	Thumpd1	100	82.768	ENSNLEG00000012369	THUMPD1	100	82.768	Nomascus_leucogenys
ENSCGRG00001014829	Thumpd1	100	67.232	ENSOPRG00000011342	THUMPD1	86	67.232	Ochotona_princeps
ENSCGRG00001014829	Thumpd1	100	84.507	ENSODEG00000012360	THUMPD1	100	84.507	Octodon_degus
ENSCGRG00001014829	Thumpd1	73	58.238	ENSONIG00000000146	thumpd1	89	59.387	Oreochromis_niloticus
ENSCGRG00001014829	Thumpd1	99	66.758	ENSOANG00000014297	THUMPD1	100	66.758	Ornithorhynchus_anatinus
ENSCGRG00001014829	Thumpd1	62	77.727	ENSOCUG00000025354	-	100	77.727	Oryctolagus_cuniculus
ENSCGRG00001014829	Thumpd1	98	84.438	ENSOCUG00000009895	-	98	84.438	Oryctolagus_cuniculus
ENSCGRG00001014829	Thumpd1	69	62.397	ENSORLG00000027557	thumpd1	99	53.094	Oryzias_latipes
ENSCGRG00001014829	Thumpd1	69	61.983	ENSORLG00020010206	thumpd1	88	56.777	Oryzias_latipes_hni
ENSCGRG00001014829	Thumpd1	69	61.983	ENSORLG00015009581	thumpd1	79	61.789	Oryzias_latipes_hsok
ENSCGRG00001014829	Thumpd1	74	59.542	ENSOMEG00000019361	thumpd1	80	59.245	Oryzias_melastigma
ENSCGRG00001014829	Thumpd1	100	84.463	ENSOGAG00000026723	THUMPD1	100	84.463	Otolemur_garnettii
ENSCGRG00001014829	Thumpd1	99	83.473	ENSOARG00000013107	THUMPD1	99	83.473	Ovis_aries
ENSCGRG00001014829	Thumpd1	96	64.307	ENSPPAG00000001653	-	96	70.323	Pan_paniscus
ENSCGRG00001014829	Thumpd1	100	83.051	ENSPPAG00000033818	-	80	83.051	Pan_paniscus
ENSCGRG00001014829	Thumpd1	100	86.313	ENSPPRG00000014118	-	100	86.313	Panthera_pardus
ENSCGRG00001014829	Thumpd1	100	85.475	ENSPTIG00000013856	-	100	85.475	Panthera_tigris_altaica
ENSCGRG00001014829	Thumpd1	96	63.235	ENSPTRG00000046073	-	100	63.277	Pan_troglodytes
ENSCGRG00001014829	Thumpd1	100	82.768	ENSPTRG00000007848	THUMPD1	80	82.768	Pan_troglodytes
ENSCGRG00001014829	Thumpd1	100	83.616	ENSPANG00000025507	THUMPD1	100	83.616	Papio_anubis
ENSCGRG00001014829	Thumpd1	87	69.453	ENSPANG00000034881	-	99	69.453	Papio_anubis
ENSCGRG00001014829	Thumpd1	67	68.936	ENSPKIG00000014491	thumpd1	73	68.936	Paramormyrops_kingsleyae
ENSCGRG00001014829	Thumpd1	76	77.323	ENSPSIG00000012430	THUMPD1	93	77.323	Pelodiscus_sinensis
ENSCGRG00001014829	Thumpd1	75	60.150	ENSPMGG00000014479	thumpd1	96	57.447	Periophthalmus_magnuspinnatus
ENSCGRG00001014829	Thumpd1	66	73.077	ENSPEMG00000002608	-	100	73.077	Peromyscus_maniculatus_bairdii
ENSCGRG00001014829	Thumpd1	55	53.333	ENSPMAG00000001389	thumpd1	90	53.500	Petromyzon_marinus
ENSCGRG00001014829	Thumpd1	99	72.055	ENSPCIG00000029241	THUMPD1	72	72.877	Phascolarctos_cinereus
ENSCGRG00001014829	Thumpd1	83	53.746	ENSPFOG00000012649	thumpd1	94	54.397	Poecilia_formosa
ENSCGRG00001014829	Thumpd1	83	54.072	ENSPLAG00000000137	thumpd1	94	54.723	Poecilia_latipinna
ENSCGRG00001014829	Thumpd1	83	53.922	ENSPMEG00000007750	thumpd1	94	54.575	Poecilia_mexicana
ENSCGRG00001014829	Thumpd1	73	60.385	ENSPREG00000000144	thumpd1	87	60.606	Poecilia_reticulata
ENSCGRG00001014829	Thumpd1	78	80.505	ENSPPYG00000007160	-	100	80.505	Pongo_abelii
ENSCGRG00001014829	Thumpd1	78	78.723	ENSPCAG00000001534	THUMPD1	100	78.723	Procavia_capensis
ENSCGRG00001014829	Thumpd1	100	87.006	ENSPCOG00000024663	THUMPD1	100	87.006	Propithecus_coquereli
ENSCGRG00001014829	Thumpd1	100	76.111	ENSPVAG00000005659	-	100	76.111	Pteropus_vampyrus
ENSCGRG00001014829	Thumpd1	61	69.643	ENSPVAG00000003286	-	99	69.643	Pteropus_vampyrus
ENSCGRG00001014829	Thumpd1	73	58.238	ENSPNYG00000007061	thumpd1	97	52.960	Pundamilia_nyererei
ENSCGRG00001014829	Thumpd1	78	57.244	ENSPNAG00000024872	thumpd1	93	59.011	Pygocentrus_nattereri
ENSCGRG00001014829	Thumpd1	62	88.128	ENSRNOG00000014946	AABR07005588.1	100	88.128	Rattus_norvegicus
ENSCGRG00001014829	Thumpd1	87	72.492	ENSRBIG00000040136	-	100	72.492	Rhinopithecus_bieti
ENSCGRG00001014829	Thumpd1	100	83.616	ENSRBIG00000040752	THUMPD1	100	83.616	Rhinopithecus_bieti
ENSCGRG00001014829	Thumpd1	87	72.168	ENSRROG00000045699	-	100	72.168	Rhinopithecus_roxellana
ENSCGRG00001014829	Thumpd1	100	83.333	ENSRROG00000042189	THUMPD1	100	83.333	Rhinopithecus_roxellana
ENSCGRG00001014829	Thumpd1	100	82.486	ENSSBOG00000034246	THUMPD1	100	82.486	Saimiri_boliviensis_boliviensis
ENSCGRG00001014829	Thumpd1	99	72.452	ENSSHAG00000003853	THUMPD1	99	72.452	Sarcophilus_harrisii
ENSCGRG00001014829	Thumpd1	82	52.055	ENSSFOG00015007512	thumpd1	96	49.085	Scleropages_formosus
ENSCGRG00001014829	Thumpd1	90	52.830	ENSSMAG00000000723	thumpd1	89	52.830	Scophthalmus_maximus
ENSCGRG00001014829	Thumpd1	86	52.548	ENSSDUG00000014502	thumpd1	95	54.167	Seriola_dumerili
ENSCGRG00001014829	Thumpd1	86	52.866	ENSSLDG00000007694	thumpd1	95	54.487	Seriola_lalandi_dorsalis
ENSCGRG00001014829	Thumpd1	84	71.104	ENSSPUG00000005096	THUMPD1	94	72.414	Sphenodon_punctatus
ENSCGRG00001014829	Thumpd1	76	57.091	ENSSPAG00000006993	thumpd1	83	58.545	Stegastes_partitus
ENSCGRG00001014829	Thumpd1	100	85.515	ENSSSCG00000024748	THUMPD1	100	85.515	Sus_scrofa
ENSCGRG00001014829	Thumpd1	69	79.592	ENSTGUG00000009247	THUMPD1	89	80.816	Taeniopygia_guttata
ENSCGRG00001014829	Thumpd1	73	60.700	ENSTRUG00000015656	thumpd1	81	60.153	Takifugu_rubripes
ENSCGRG00001014829	Thumpd1	81	57.491	ENSTNIG00000001584	thumpd1	93	57.093	Tetraodon_nigroviridis
ENSCGRG00001014829	Thumpd1	100	84.746	ENSTBEG00000005252	THUMPD1	88	84.746	Tupaia_belangeri
ENSCGRG00001014829	Thumpd1	100	84.637	ENSTTRG00000016435	THUMPD1	100	84.637	Tursiops_truncatus
ENSCGRG00001014829	Thumpd1	62	70.089	ENSUAMG00000005779	-	100	70.089	Ursus_americanus
ENSCGRG00001014829	Thumpd1	100	82.123	ENSVPAG00000003422	THUMPD1	100	82.123	Vicugna_pacos
ENSCGRG00001014829	Thumpd1	100	83.799	ENSVVUG00000023241	THUMPD1	99	83.799	Vulpes_vulpes
ENSCGRG00001014829	Thumpd1	78	60.145	ENSXETG00000005539	thumpd1	93	60.364	Xenopus_tropicalis
ENSCGRG00001014829	Thumpd1	74	58.088	ENSXMAG00000026052	thumpd1	94	54.397	Xiphophorus_maculatus