EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCGRG00001014843 (Gene tree)
Gene ID: -
Gene Symbol: Mbd1
Alias: Cxxc3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Cricetulus_griseus_chok1gshd
Status: putative
Strand: Minus strand
Length: 13939 bases
Position: chrscaffold_25:1585296-1599234
Accession: 1333811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCGRP00001013819	MBD	PF01429.19	2.4e-17	1	1
ENSCGRP00001013814	MBD	PF01429.19	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCGRT00001018051	-	1845	-	ENSCGRP00001013814	614 (aa)	-	-
ENSCGRT00001018056	-	2116	-	ENSCGRP00001013819	606 (aa)	-	-

Gene Model

Click here to download ENSCGRG00001014843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCGRG00001014843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCGRG00001014843	Mbd1	100	74.877	ENSG00000141644	MBD1	100	76.524	Homo_sapiens
ENSCGRG00001014843	Mbd1	100	70.093	ENSAMEG00000000238	MBD1	96	71.226	Ailuropoda_melanoleuca
ENSCGRG00001014843	Mbd1	63	40.640	ENSACAG00000006091	-	100	40.394	Anolis_carolinensis
ENSCGRG00001014843	Mbd1	100	73.450	ENSANAG00000036253	MBD1	100	72.611	Aotus_nancymaae
ENSCGRG00001014843	Mbd1	100	72.295	ENSBTAG00000003801	MBD1	100	72.787	Bos_taurus
ENSCGRG00001014843	Mbd1	98	74.497	ENSCJAG00000004959	MBD1	100	69.302	Callithrix_jacchus
ENSCGRG00001014843	Mbd1	98	79.545	ENSCAFG00000018928	MBD1	96	70.236	Canis_familiaris
ENSCGRG00001014843	Mbd1	100	70.762	ENSCAFG00020024272	MBD1	100	71.229	Canis_lupus_dingo
ENSCGRG00001014843	Mbd1	100	72.295	ENSCHIG00000021134	MBD1	100	72.787	Capra_hircus
ENSCGRG00001014843	Mbd1	98	72.987	ENSTSYG00000000509	MBD1	100	70.032	Carlito_syrichta
ENSCGRG00001014843	Mbd1	100	58.414	ENSCAPG00000015782	MBD1	100	58.414	Cavia_aperea
ENSCGRG00001014843	Mbd1	100	67.485	ENSCPOG00000001671	MBD1	100	65.480	Cavia_porcellus
ENSCGRG00001014843	Mbd1	100	72.786	ENSCCAG00000034600	MBD1	92	73.058	Cebus_capucinus
ENSCGRG00001014843	Mbd1	100	75.041	ENSCATG00000029959	MBD1	100	75.041	Cercocebus_atys
ENSCGRG00001014843	Mbd1	100	72.713	ENSCLAG00000007457	MBD1	89	72.871	Chinchilla_lanigera
ENSCGRG00001014843	Mbd1	100	75.041	ENSCSAG00000018070	MBD1	100	75.041	Chlorocebus_sabaeus
ENSCGRG00001014843	Mbd1	100	75.041	ENSCANG00000033425	MBD1	100	75.041	Colobus_angolensis_palliatus
ENSCGRG00001014843	Mbd1	100	72.360	ENSCGRG00000014135	Mbd1	100	81.759	Cricetulus_griseus_crigri
ENSCGRG00001014843	Mbd1	100	67.757	ENSDNOG00000015998	MBD1	100	68.372	Dasypus_novemcinctus
ENSCGRG00001014843	Mbd1	91	74.772	ENSDORG00000013917	Mbd1	100	62.945	Dipodomys_ordii
ENSCGRG00001014843	Mbd1	100	72.162	ENSEASG00005003857	MBD1	100	72.162	Equus_asinus_asinus
ENSCGRG00001014843	Mbd1	100	73.607	ENSECAG00000011497	MBD1	80	73.770	Equus_caballus
ENSCGRG00001014843	Mbd1	100	72.205	ENSFCAG00000015730	MBD1	100	71.384	Felis_catus
ENSCGRG00001014843	Mbd1	98	50.977	ENSFDAG00000011085	MBD1	97	51.364	Fukomys_damarensis
ENSCGRG00001014843	Mbd1	100	75.041	ENSGGOG00000016966	MBD1	100	75.041	Gorilla_gorilla
ENSCGRG00001014843	Mbd1	100	76.026	ENSHGLG00000008740	MBD1	100	77.011	Heterocephalus_glaber_female
ENSCGRG00001014843	Mbd1	93	75.601	ENSHGLG00100005198	MBD1	100	71.125	Heterocephalus_glaber_male
ENSCGRG00001014843	Mbd1	100	74.163	ENSSTOG00000007780	MBD1	100	74.322	Ictidomys_tridecemlineatus
ENSCGRG00001014843	Mbd1	100	65.645	ENSJJAG00000022859	Mbd1	100	65.161	Jaculus_jaculus
ENSCGRG00001014843	Mbd1	65	39.340	ENSLACG00000002414	-	58	39.340	Latimeria_chalumnae
ENSCGRG00001014843	Mbd1	100	66.292	ENSLAFG00000031328	MBD1	100	66.453	Loxodonta_africana
ENSCGRG00001014843	Mbd1	100	75.041	ENSMFAG00000026335	MBD1	100	75.041	Macaca_fascicularis
ENSCGRG00001014843	Mbd1	100	72.082	ENSMMUG00000009050	MBD1	100	72.082	Macaca_mulatta
ENSCGRG00001014843	Mbd1	100	75.041	ENSMNEG00000038822	MBD1	100	75.041	Macaca_nemestrina
ENSCGRG00001014843	Mbd1	100	75.041	ENSMLEG00000043121	MBD1	100	75.041	Mandrillus_leucophaeus
ENSCGRG00001014843	Mbd1	69	34.634	ENSMAMG00000023341	-	66	34.135	Mastacembelus_armatus
ENSCGRG00001014843	Mbd1	100	73.667	ENSMICG00000006414	MBD1	100	73.625	Microcebus_murinus
ENSCGRG00001014843	Mbd1	64	39.409	ENSMODG00000001286	-	57	39.506	Monodelphis_domestica
ENSCGRG00001014843	Mbd1	100	75.851	ENSMUSG00000024561	Mbd1	100	75.851	Mus_musculus
ENSCGRG00001014843	Mbd1	100	74.802	MGP_PahariEiJ_G0019128	Mbd1	100	75.119	Mus_pahari
ENSCGRG00001014843	Mbd1	98	75.566	MGP_SPRETEiJ_G0023304	Mbd1	99	75.935	Mus_spretus
ENSCGRG00001014843	Mbd1	100	68.976	ENSMPUG00000008843	MBD1	96	69.291	Mustela_putorius_furo
ENSCGRG00001014843	Mbd1	100	68.770	ENSMLUG00000008286	MBD1	96	68.770	Myotis_lucifugus
ENSCGRG00001014843	Mbd1	100	65.764	ENSNGAG00000011412	Mbd1	100	65.764	Nannospalax_galili
ENSCGRG00001014843	Mbd1	98	58.754	ENSNLEG00000032711	-	89	58.923	Nomascus_leucogenys
ENSCGRG00001014843	Mbd1	100	74.220	ENSNLEG00000011661	-	100	74.220	Nomascus_leucogenys
ENSCGRG00001014843	Mbd1	100	65.517	ENSOPRG00000007647	MBD1	100	65.517	Ochotona_princeps
ENSCGRG00001014843	Mbd1	100	63.813	ENSODEG00000018451	MBD1	100	64.782	Octodon_degus
ENSCGRG00001014843	Mbd1	84	41.882	ENSOANG00000014593	-	100	44.278	Ornithorhynchus_anatinus
ENSCGRG00001014843	Mbd1	100	68.760	ENSOCUG00000006554	MBD1	100	69.606	Oryctolagus_cuniculus
ENSCGRG00001014843	Mbd1	100	68.992	ENSOGAG00000003784	MBD1	96	68.779	Otolemur_garnettii
ENSCGRG00001014843	Mbd1	100	69.340	ENSOARG00000004218	MBD1	95	69.654	Ovis_aries
ENSCGRG00001014843	Mbd1	100	75.041	ENSPPAG00000038886	MBD1	100	75.041	Pan_paniscus
ENSCGRG00001014843	Mbd1	100	73.813	ENSPPRG00000021387	MBD1	100	74.304	Panthera_pardus
ENSCGRG00001014843	Mbd1	100	73.977	ENSPTIG00000021231	MBD1	100	74.468	Panthera_tigris_altaica
ENSCGRG00001014843	Mbd1	100	75.041	ENSPTRG00000010021	MBD1	100	75.041	Pan_troglodytes
ENSCGRG00001014843	Mbd1	98	75.168	ENSPANG00000010867	MBD1	100	72.082	Papio_anubis
ENSCGRG00001014843	Mbd1	100	60.125	ENSPEMG00000022630	Mbd1	100	61.682	Peromyscus_maniculatus_bairdii
ENSCGRG00001014843	Mbd1	96	42.952	ENSPCIG00000027937	-	79	43.377	Phascolarctos_cinereus
ENSCGRG00001014843	Mbd1	58	55.435	ENSPMEG00000024145	mbd1b	51	36.683	Poecilia_mexicana
ENSCGRG00001014843	Mbd1	100	74.713	ENSPPYG00000009158	MBD1	91	74.713	Pongo_abelii
ENSCGRG00001014843	Mbd1	99	67.107	ENSPCAG00000001648	MBD1	99	67.107	Procavia_capensis
ENSCGRG00001014843	Mbd1	100	75.738	ENSPCOG00000012450	MBD1	100	76.524	Propithecus_coquereli
ENSCGRG00001014843	Mbd1	100	59.874	ENSRNOG00000024104	Mbd1	100	60.348	Rattus_norvegicus
ENSCGRG00001014843	Mbd1	100	67.980	ENSRBIG00000041294	MBD1	100	67.980	Rhinopithecus_bieti
ENSCGRG00001014843	Mbd1	100	74.548	ENSRROG00000032517	MBD1	100	74.548	Rhinopithecus_roxellana
ENSCGRG00001014843	Mbd1	98	74.161	ENSSBOG00000027169	MBD1	92	73.510	Saimiri_boliviensis_boliviensis
ENSCGRG00001014843	Mbd1	67	46.411	ENSSHAG00000003661	-	88	48.325	Sarcophilus_harrisii
ENSCGRG00001014843	Mbd1	70	30.155	ENSSMAG00000014640	mbd1b	50	50.794	Scophthalmus_maximus
ENSCGRG00001014843	Mbd1	100	72.771	ENSSSCG00000004516	MBD1	100	72.934	Sus_scrofa
ENSCGRG00001014843	Mbd1	69	67.886	ENSTBEG00000012651	-	69	67.886	Tupaia_belangeri
ENSCGRG00001014843	Mbd1	100	71.849	ENSTTRG00000015523	MBD1	100	72.013	Tursiops_truncatus
ENSCGRG00001014843	Mbd1	100	70.656	ENSUAMG00000004752	MBD1	100	71.358	Ursus_americanus
ENSCGRG00001014843	Mbd1	100	72.609	ENSUMAG00000002947	MBD1	100	73.977	Ursus_maritimus